FFCP PHASE1:Hg19::chr9:140149661..140149674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25920 | |EntrezGene=25920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24324 | |HGNC=24324 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WX92 | |UniProt=Q8WX92 | ||
|association_with_transcript=36bp_to_ENST00000343053_5end | |association_with_transcript=36bp_to_ENST00000343053_5end | ||
|cluster_id=chr9:140149661..140149674,+ | |||
|description=CAGE_peak_3_at_COBRA1_5end | |description=CAGE_peak_3_at_COBRA1_5end | ||
|id=chr9:140149661..140149674,+ | |id=chr9:140149661..140149674,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.58e-19!35;CL:0002078!2.07e-18!44;CL:0002139!7.28e-17!24;CL:0000071!4.23e-13!18;CL:0002546!4.23e-13!18;CL:0000213!4.10e-09!57;CL:0000215!4.10e-09!57;CL:1000413!3.50e-07!9;CL:1000449!4.25e-07!16 | |ontology_enrichment_celltype=CL:0000115!3.58e-19!35;CL:0002078!2.07e-18!44;CL:0002139!7.28e-17!24;CL:0000071!4.23e-13!18;CL:0002546!4.23e-13!18;CL:0000213!4.10e-09!57;CL:0000215!4.10e-09!57;CL:1000413!3.50e-07!9;CL:1000449!4.25e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.99e-45;24!CL:0000115;1.16e-41;36!CL:0000071;7.18e-34;18!CL:0002078;5.83e-26;45!CL:0000213;4.72e-17;58!CL:0000215;4.72e-17;58!CL:1000413;1.06e-16;9!CL:0002543;5.62e-13;6!CL:1000746;5.96e-13;7!CL:1000612;5.96e-13;7!CL:0002138;2.50e-12;6!CL:0002544;4.03e-12;6!CL:0002681;1.37e-11;12!CL:0002584;1.37e-11;12!CL:1000449;3.06e-11;15!CL:0002188;3.84e-10;5!CL:1000497;1.22e-09;17!CL:0002518;1.22e-09;17!CL:0002144;1.72e-07;3!CL:0002618;2.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.13e-52,36;CL:0002139,7.42e-46,24;CL:0002078,2.55e-42,45;CL:0000071,6.70e-35,18;CL:0002546,6.70e-35,18;CL:0000213,3.05e-28,58;CL:0000215,3.05e-28,58;CL:1000413,8.78e-18,9;CL:1000746,3.51e-13,7;CL:1000612,3.51e-13,7;CL:0002543,5.90e-13,6;CL:0002544,9.34e-13,6;CL:0000222,1.53e-12,121;CL:0005020,2.01e-12,6;CL:0002138,2.01e-12,6;CL:0005022,2.01e-12,6;CL:0002681,9.22e-12,12;CL:0002584,9.22e-12,12;CL:1000449,2.19e-11,15;CL:0002188,1.88e-10,5;CL:1000497,9.12e-10,17;CL:0002518,9.12e-10,17;CL:0000066,1.35e-09,253;CL:0000076,7.79e-09,63;CL:0002144,2.00e-07,3;CL:0002618,2.71e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.18e-34;18!CL:0005022;2.50e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.23e-13!18;UBERON:0004638!4.23e-13!18;UBERON:0004852!4.23e-13!18;UBERON:0006914!1.96e-11!25;UBERON:0000487!2.25e-11!22;UBERON:0003915!3.50e-07!9;UBERON:0004700!3.50e-07!9;UBERON:0001917!3.50e-07!9;UBERON:0004211!4.25e-07!16;UBERON:0001285!4.25e-07!16;UBERON:0007684!4.25e-07!16;UBERON:0003220!4.25e-07!16;UBERON:0004208!4.25e-07!16;UBERON:0002049!4.28e-07!79;UBERON:0007798!4.28e-07!79;UBERON:0000055!5.51e-07!69 | |ontology_enrichment_uberon=UBERON:0001986!4.23e-13!18;UBERON:0004638!4.23e-13!18;UBERON:0004852!4.23e-13!18;UBERON:0006914!1.96e-11!25;UBERON:0000487!2.25e-11!22;UBERON:0003915!3.50e-07!9;UBERON:0004700!3.50e-07!9;UBERON:0001917!3.50e-07!9;UBERON:0004211!4.25e-07!16;UBERON:0001285!4.25e-07!16;UBERON:0007684!4.25e-07!16;UBERON:0003220!4.25e-07!16;UBERON:0004208!4.25e-07!16;UBERON:0002049!4.28e-07!79;UBERON:0007798!4.28e-07!79;UBERON:0000055!5.51e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.18e-34;18!UBERON:0001986;7.18e-34;18!UBERON:0004852;7.18e-34;18!UBERON:0000487;1.20e-26;22!UBERON:0006914;9.27e-23;25!UBERON:0003915;1.06e-16;9!UBERON:0004700;1.06e-16;9!UBERON:0001917;1.06e-16;9!UBERON:0000490;2.43e-16;33!UBERON:0000353;1.46e-13;15!UBERON:0000074;5.96e-13;7!UBERON:0001229;5.96e-13;7!UBERON:0001225;1.37e-11;12!UBERON:0008987;1.37e-11;12!UBERON:0006555;3.06e-11;15!UBERON:0004819;3.06e-11;15!UBERON:0001285;3.06e-11;15!UBERON:0007684;3.06e-11;15!UBERON:0003914;5.07e-10;74!UBERON:0000055;6.09e-10;65!UBERON:0002465;3.39e-09;10!UBERON:0001473;5.39e-09;8!UBERON:0004536;5.39e-09;8!UBERON:0006558;5.39e-09;8!UBERON:0001851;7.11e-09;15!UBERON:0001638;2.69e-08;9!UBERON:0003920;2.69e-08;9!UBERON:0004582;2.69e-08;9!UBERON:0007500;2.93e-08;56!UBERON:0001981;2.93e-08;56!UBERON:0004537;2.93e-08;56!UBERON:0010523;1.72e-07;3!UBERON:0001915;1.72e-07;3!UBERON:0001982;1.72e-07;3 | |||
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| ||
|short_description=p3@COBRA1 | |short_description=p3@COBRA1 | ||
}} | }} |
Latest revision as of 16:56, 16 September 2015
Short description: | p3@COBRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COBRA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000343053_5end |
EntrezGene: | COBRA1 |
HGNC: | 24324 |
UniProt: | Q8WX92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.13e-52 | 36 |
endothelial cell of vascular tree | 7.42e-46 | 24 |
meso-epithelial cell | 2.55e-42 | 45 |
blood vessel endothelial cell | 6.70e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.70e-35 | 18 |
lining cell | 3.05e-28 | 58 |
barrier cell | 3.05e-28 | 58 |
endothelial cell of artery | 8.78e-18 | 9 |
glomerular cell | 3.51e-13 | 7 |
kidney corpuscule cell | 3.51e-13 | 7 |
vein endothelial cell | 5.90e-13 | 6 |
aortic endothelial cell | 9.34e-13 | 6 |
mesodermal cell | 1.53e-12 | 121 |
lymphangioblast | 2.01e-12 | 6 |
endothelial cell of lymphatic vessel | 2.01e-12 | 6 |
vascular lymphangioblast | 2.01e-12 | 6 |
kidney cortical cell | 9.22e-12 | 12 |
renal cortical epithelial cell | 9.22e-12 | 12 |
epithelial cell of nephron | 2.19e-11 | 15 |
glomerular endothelial cell | 1.88e-10 | 5 |
kidney cell | 9.12e-10 | 17 |
kidney epithelial cell | 9.12e-10 | 17 |
epithelial cell | 1.35e-09 | 253 |
squamous epithelial cell | 7.79e-09 | 63 |
capillary endothelial cell | 2.00e-07 | 3 |
endothelial cell of umbilical vein | 2.71e-07 | 3 |