FFCP PHASE1:Hg19::chr16:3309173..3309188,-: Difference between revisions
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|id=chr16:3309173..3309188,-
|short_description=p@chr16:3309173..3309188,-
|description=CAGE_peak_at_chr16:3309173..3309188,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:3309173..3309188,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr16:3309173..3309188,- | |||
|id=chr16:3309173..3309188,- | |||
|ontology_enrichment_celltype=CL:0002057!5.57e-101!42;CL:0000860!1.08e-93!45;CL:0000766!8.93e-69!76;CL:0002194!2.15e-63!63;CL:0000576!2.15e-63!63;CL:0000040!2.15e-63!63;CL:0000559!2.15e-63!63;CL:0002009!3.22e-61!65;CL:0000839!2.56e-56!70;CL:0000557!2.03e-55!71;CL:0000763!5.94e-44!112;CL:0000049!5.94e-44!112;CL:0000738!1.84e-37!140;CL:0002087!5.15e-34!119;CL:0000037!8.66e-29!172;CL:0000566!8.66e-29!172;CL:0002031!2.22e-28!124;CL:0002032!5.34e-27!165;CL:0000837!5.34e-27!165;CL:0000988!1.06e-26!182;CL:0000094!1.57e-11!8;CL:0000767!1.91e-11!3;CL:0000134!9.20e-10!358;CL:0002320!2.13e-09!365;CL:0000081!2.62e-08!11;CL:0000219!4.12e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.03e-90;33!CL:0002057;4.03e-90;33!CL:0000473;2.92e-66;39!CL:0000234;2.92e-66;39!CL:0000576;1.80e-48;48!CL:0000766;8.55e-31;69!CL:0000763;9.97e-16;100!CL:0002087;1.66e-13;104!CL:0000738;3.57e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.24e-94,42;CL:0002057,3.24e-94,42;CL:0000473,6.03e-82,48;CL:0000234,6.03e-82,48;CL:0002194,9.24e-65,59;CL:0000576,9.24e-65,59;CL:0000040,9.24e-65,59;CL:0000559,9.24e-65,59;CL:0002009,1.53e-62,61;CL:0000839,1.42e-57,66;CL:0000766,3.10e-57,72;CL:0000557,1.14e-56,67;CL:0000763,5.83e-37,108;CL:0000049,5.83e-37,108;CL:0002087,1.61e-31,115;CL:0002031,4.80e-30,120;CL:0000738,1.53e-28,136;CL:0002032,1.78e-23,161;CL:0000837,1.78e-23,161;CL:0000037,2.53e-22,168;CL:0000988,5.63e-21,177;CL:0000134,2.76e-08,354;CL:0002320,4.90e-08,361;CL:0000219,3.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.74e-69;42!CL:0000049;1.47e-11;108!UBERON:0005425;2.95e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.65e-58!102;UBERON:0003061!8.65e-58!102;UBERON:0002193!7.80e-52!112;UBERON:0002371!2.27e-51!80;UBERON:0001474!3.08e-47!86;UBERON:0004765!4.89e-39!101;UBERON:0001434!4.89e-39!101;UBERON:0002405!2.69e-33!115;UBERON:0003081!2.04e-22!216;UBERON:0002204!2.26e-20!167;UBERON:0000178!2.28e-11!15;UBERON:0000179!2.28e-11!15;UBERON:0000463!2.28e-11!15;UBERON:0002384!6.73e-09!375;UBERON:0000926!3.85e-07!448;UBERON:0004120!3.85e-07!448;UBERON:0006603!3.85e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.95e-08;1!UBERON:0001785;2.95e-08;1!UBERON:0002464;2.95e-08;1!UBERON:0004904;2.95e-08;1!UBERON:0001021;2.95e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-49,76;UBERON:0001474,1.08e-45,82;UBERON:0002390,1.18e-44,98;UBERON:0003061,1.18e-44,98;UBERON:0004765,2.57e-41,90;UBERON:0002193,3.58e-40,108;UBERON:0002405,7.24e-40,93;UBERON:0001434,8.10e-37,100;UBERON:0002204,1.86e-20,167;UBERON:0003081,1.90e-19,203;UBERON:0000926,5.90e-11,315;UBERON:0004120,5.90e-11,315;UBERON:0006603,5.90e-11,315;UBERON:0000941,2.84e-08,1;UBERON:0001785,2.84e-08,1;UBERON:0002464,2.84e-08,1;UBERON:0004904,2.84e-08,1;UBERON:0001021,2.84e-08,1;UBERON:0003902,2.84e-08,1;UBERON:0005425,2.84e-08,1;UBERON:0002384,1.07e-07,371 | |||
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|short_description=p@chr16:3309173..3309188,- | |||
}} | }} |
Latest revision as of 08:37, 25 July 2015
Short description: | p@chr16:3309173..3309188, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3309173..3309188, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.24e-94 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.24e-94 | 42 |
defensive cell | 6.03e-82 | 48 |
phagocyte | 6.03e-82 | 48 |
monopoietic cell | 9.24e-65 | 59 |
monocyte | 9.24e-65 | 59 |
monoblast | 9.24e-65 | 59 |
promonocyte | 9.24e-65 | 59 |
macrophage dendritic cell progenitor | 1.53e-62 | 61 |
myeloid lineage restricted progenitor cell | 1.42e-57 | 66 |
myeloid leukocyte | 3.10e-57 | 72 |
granulocyte monocyte progenitor cell | 1.14e-56 | 67 |
myeloid cell | 5.83e-37 | 108 |
common myeloid progenitor | 5.83e-37 | 108 |
nongranular leukocyte | 1.61e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 4.80e-30 | 120 |
leukocyte | 1.53e-28 | 136 |
hematopoietic oligopotent progenitor cell | 1.78e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-23 | 161 |
hematopoietic stem cell | 2.53e-22 | 168 |
hematopoietic cell | 5.63e-21 | 177 |
mesenchymal cell | 2.76e-08 | 354 |
connective tissue cell | 4.90e-08 | 361 |
motile cell | 3.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-49 | 76 |
bone element | 1.08e-45 | 82 |
hematopoietic system | 1.18e-44 | 98 |
blood island | 1.18e-44 | 98 |
skeletal element | 2.57e-41 | 90 |
hemolymphoid system | 3.58e-40 | 108 |
immune system | 7.24e-40 | 93 |
skeletal system | 8.10e-37 | 100 |
musculoskeletal system | 1.86e-20 | 167 |
lateral plate mesoderm | 1.90e-19 | 203 |
mesoderm | 5.90e-11 | 315 |
mesoderm-derived structure | 5.90e-11 | 315 |
presumptive mesoderm | 5.90e-11 | 315 |
cranial nerve II | 2.84e-08 | 1 |
cranial nerve | 2.84e-08 | 1 |
nerve trunk | 2.84e-08 | 1 |
nerve connecting eye with brain | 2.84e-08 | 1 |
nerve | 2.84e-08 | 1 |
retinal neural layer | 2.84e-08 | 1 |
presumptive neural retina | 2.84e-08 | 1 |
connective tissue | 1.07e-07 | 371 |