FFCP PHASE1:Hg19::chr6:24495067..24495096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7915 | |EntrezGene=7915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=408 | |HGNC=408 | ||
|TSSclassifier=strong | |||
|UniProt=P51649,C9J8Q5,F5H328 | |UniProt=P51649,C9J8Q5,F5H328 | ||
|association_with_transcript=0bp_to_ENST00000357578,ENST00000491546,ENST00000546278_5end | |association_with_transcript=0bp_to_ENST00000357578,ENST00000491546,ENST00000546278_5end | ||
|cluster_id=chr6:24495067..24495096,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_ALDH5A1_5end | |description=CAGE_peak_2_at_ALDH5A1_5end | ||
|id=chr6:24495067..24495096,+ | |id=chr6:24495067..24495096,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.98e-08;82!UBERON:0008947;4.74e-07;29!UBERON:0002532;6.18e-07;206!UBERON:0010316;6.18e-07;206 | |||
|ontology_enrichment_disease=DOID:162!4.17e-13!235;DOID:14566!1.39e-12!239;DOID:305!5.92e-10!106;DOID:0050687!9.25e-10!143 | |ontology_enrichment_disease=DOID:162!4.17e-13!235;DOID:14566!1.39e-12!239;DOID:305!5.92e-10!106;DOID:0050687!9.25e-10!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.70e-11,235;DOID:14566,1.49e-10,239;DOID:305,7.22e-09,106;DOID:0050687,1.56e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.74e-43!115;UBERON:0001049!9.96e-23!57;UBERON:0005068!9.96e-23!57;UBERON:0006241!9.96e-23!57;UBERON:0007135!9.96e-23!57;UBERON:0002346!2.29e-19!90;UBERON:0000955!6.20e-19!69;UBERON:0006238!6.20e-19!69;UBERON:0005743!6.64e-19!86;UBERON:0002616!1.38e-18!59;UBERON:0001017!2.27e-18!82;UBERON:0003075!2.46e-18!86;UBERON:0007284!2.46e-18!86;UBERON:0000073!9.91e-18!94;UBERON:0001016!9.91e-18!94;UBERON:0003080!1.71e-17!42;UBERON:0002780!3.70e-17!41;UBERON:0001890!3.70e-17!41;UBERON:0006240!3.70e-17!41;UBERON:0002020!5.92e-15!34;UBERON:0003528!5.92e-15!34;UBERON:0001893!9.46e-15!34;UBERON:0002791!2.72e-14!33;UBERON:0001869!6.97e-14!32;UBERON:0003056!2.03e-12!61;UBERON:0002619!2.83e-12!22;UBERON:0001950!3.17e-11!20;UBERON:0000956!1.72e-10!25;UBERON:0000203!1.72e-10!25;UBERON:0000153!1.31e-09!129;UBERON:0007811!1.31e-09!129;UBERON:0000033!3.28e-09!123;UBERON:0004921!5.50e-08!129;UBERON:0004185!5.50e-08!129;UBERON:0000924!4.15e-07!173;UBERON:0006601!4.15e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!3.74e-43!115;UBERON:0001049!9.96e-23!57;UBERON:0005068!9.96e-23!57;UBERON:0006241!9.96e-23!57;UBERON:0007135!9.96e-23!57;UBERON:0002346!2.29e-19!90;UBERON:0000955!6.20e-19!69;UBERON:0006238!6.20e-19!69;UBERON:0005743!6.64e-19!86;UBERON:0002616!1.38e-18!59;UBERON:0001017!2.27e-18!82;UBERON:0003075!2.46e-18!86;UBERON:0007284!2.46e-18!86;UBERON:0000073!9.91e-18!94;UBERON:0001016!9.91e-18!94;UBERON:0003080!1.71e-17!42;UBERON:0002780!3.70e-17!41;UBERON:0001890!3.70e-17!41;UBERON:0006240!3.70e-17!41;UBERON:0002020!5.92e-15!34;UBERON:0003528!5.92e-15!34;UBERON:0001893!9.46e-15!34;UBERON:0002791!2.72e-14!33;UBERON:0001869!6.97e-14!32;UBERON:0003056!2.03e-12!61;UBERON:0002619!2.83e-12!22;UBERON:0001950!3.17e-11!20;UBERON:0000956!1.72e-10!25;UBERON:0000203!1.72e-10!25;UBERON:0000153!1.31e-09!129;UBERON:0007811!1.31e-09!129;UBERON:0000033!3.28e-09!123;UBERON:0004921!5.50e-08!129;UBERON:0004185!5.50e-08!129;UBERON:0000924!4.15e-07!173;UBERON:0006601!4.15e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.10e-13;22!UBERON:0002780;1.70e-13;41!UBERON:0001890;1.70e-13;41!UBERON:0003528;2.83e-13;34!UBERON:0002020;2.83e-13;34!UBERON:0001869;3.68e-13;32!UBERON:0002791;3.74e-13;32!UBERON:0001893;3.75e-13;34!UBERON:0007023;6.20e-13;114!UBERON:0001950;1.59e-12;20!UBERON:0000073;3.28e-12;53!UBERON:0002616;3.28e-12;53!UBERON:0000956;1.05e-10;25!UBERON:0000203;1.05e-10;25!UBERON:0000955;5.86e-08;68!UBERON:0001017;1.03e-07;75!UBERON:0001016;5.11e-07;83!UBERON:0001737;5.23e-07;9!UBERON:0001557;5.23e-07;9 | |||
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|short_description=p2@ALDH5A1 | |short_description=p2@ALDH5A1 | ||
}} | }} |
Latest revision as of 05:53, 17 September 2015
Short description: | p2@ALDH5A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALDH5A1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000357578, ENST00000491546, ENST00000546278_5end |
EntrezGene: | ALDH5A1 |
HGNC: | 408 |
UniProt: | P51649C9J8Q5F5H328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.79e-48 | 114 |
neural tube | 4.02e-23 | 56 |
neural rod | 4.02e-23 | 56 |
future spinal cord | 4.02e-23 | 56 |
neural keel | 4.02e-23 | 56 |
regional part of nervous system | 2.65e-21 | 53 |
regional part of brain | 2.65e-21 | 53 |
neurectoderm | 2.75e-19 | 86 |
organ system subdivision | 3.26e-19 | 223 |
neural plate | 3.78e-18 | 82 |
presumptive neural plate | 3.78e-18 | 82 |
regional part of forebrain | 4.08e-18 | 41 |
forebrain | 4.08e-18 | 41 |
anterior neural tube | 4.08e-18 | 41 |
future forebrain | 4.08e-18 | 41 |
brain | 7.05e-17 | 68 |
future brain | 7.05e-17 | 68 |
central nervous system | 7.42e-16 | 81 |
brain grey matter | 1.27e-15 | 34 |
gray matter | 1.27e-15 | 34 |
telencephalon | 2.11e-15 | 34 |
nervous system | 7.72e-15 | 89 |
cerebral hemisphere | 1.98e-14 | 32 |
regional part of telencephalon | 2.29e-14 | 32 |
regional part of cerebral cortex | 1.27e-13 | 22 |
pre-chordal neural plate | 2.05e-13 | 61 |
neocortex | 1.93e-12 | 20 |
cerebral cortex | 1.17e-10 | 25 |
pallium | 1.17e-10 | 25 |
ecto-epithelium | 1.82e-10 | 104 |
structure with developmental contribution from neural crest | 1.84e-08 | 132 |
subdivision of digestive tract | 6.90e-08 | 118 |
larynx | 5.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.70e-11 | 235 |
disease of cellular proliferation | 1.49e-10 | 239 |
carcinoma | 7.22e-09 | 106 |
cell type cancer | 1.56e-08 | 143 |