FFCP PHASE1:Hg19::chr16:65157630..65157695,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:65157630..65157695,-
|short_description=p@chr16:65157630..65157695,-
|description=CAGE_peak_at_chr16:65157630..65157695,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:65157630..65157695,- | |||
|description=CAGE_peak_at_chr16:65157630..65157695,- | |||
|id=chr16:65157630..65157695,- | |||
|ontology_enrichment_celltype=CL:0000055!2.60e-31!180;CL:0000057!1.05e-20!75;CL:0000680!2.21e-14!57;CL:0000056!2.21e-14!57;CL:0000355!2.21e-14!57;CL:0000187!3.21e-13!54;CL:0000183!1.95e-12!59;CL:0000192!9.69e-12!42;CL:0000514!9.69e-12!42;CL:0000393!1.98e-10!60;CL:0000211!1.98e-10!60;CL:0000359!1.57e-09!32;CL:0002620!1.92e-09!23;CL:0000222!3.41e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.72e-10;32!CL:0000192;1.46e-09;43!CL:0002620;1.59e-09;23!CL:0000134;2.25e-09;55!CL:0000057;1.33e-08;73!CL:0002334;2.70e-08;12!CL:0002320;6.48e-08;188!CL:0000048;9.99e-08;58!CL:0000723;1.18e-07;61!CL:0000327;3.89e-07;15!CL:0000499;3.95e-07;28!CL:0000187;4.22e-07;55!CL:0002494;6.41e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.41e-22,76;CL:0000680,4.25e-15,58;CL:0000056,4.25e-15,58;CL:0000355,4.25e-15,58;CL:0000192,1.00e-13,43;CL:0000514,1.00e-13,43;CL:0000187,1.15e-13,55;CL:0000048,1.33e-12,427;CL:0000723,4.12e-12,433;CL:0000359,2.37e-11,32;CL:0000034,4.51e-11,441;CL:0000393,5.01e-11,61;CL:0000211,5.01e-11,61;CL:0002620,2.24e-09,23;CL:0002334,4.37e-08,12;CL:0000222,1.26e-07,121;CL:0002494,4.99e-07,16;CL:0000327,6.25e-07,15;CL:0000499,6.54e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;1.46e-09;43!CL:0000355;2.05e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!7.64e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.40e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.74e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.14e-17!83;UBERON:0002329!9.14e-17!83;UBERON:0003077!9.14e-17!83;UBERON:0003059!9.14e-17!83;UBERON:0007282!9.14e-17!83;UBERON:0009618!9.14e-17!83;UBERON:0007285!9.14e-17!83;UBERON:0000475!1.13e-15!365;UBERON:0004290!2.89e-14!70;UBERON:0002385!2.09e-13!63;UBERON:0001015!2.09e-13!63;UBERON:0000383!2.09e-13!63;UBERON:0001134!3.85e-13!61;UBERON:0002036!3.85e-13!61;UBERON:0003082!3.85e-13!61;UBERON:0000486!2.98e-12!82;UBERON:0004872!1.13e-11!84;UBERON:0000119!1.33e-10!312;UBERON:0000483!5.69e-10!309;UBERON:0005256!2.51e-09!143;UBERON:0002100!1.25e-08!216;UBERON:0000481!1.62e-08!347;UBERON:0000468!1.79e-08!659;UBERON:0001637!4.70e-08!42;UBERON:0003509!4.70e-08!42;UBERON:0004572!4.70e-08!42;UBERON:0001981!1.55e-07!60;UBERON:0007500!1.55e-07!60;UBERON:0004537!1.55e-07!60;UBERON:0006965!1.55e-07!60;UBERON:0000477!1.59e-07!286;UBERON:0002049!2.01e-07!79;UBERON:0007798!2.01e-07!79;UBERON:0002199!2.85e-07!45;UBERON:0002416!2.85e-07!45;UBERON:0004923!7.69e-07!57;UBERON:0003102!8.10e-07!95;UBERON:0000025!8.37e-07!194;UBERON:0002097!8.87e-07!40;UBERON:0000490!9.75e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.77e-07;198!UBERON:0001637;3.19e-07;42!UBERON:0003509;3.19e-07;42!UBERON:0004572;3.19e-07;42!UBERON:0004573;4.75e-07;33!UBERON:0004571;4.75e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.49e-13,62;UBERON:0002036,3.49e-13,62;UBERON:0003082,3.49e-13,62;UBERON:0002385,3.77e-13,64;UBERON:0001015,3.77e-13,64;UBERON:0000383,3.77e-13,64;UBERON:0002329,7.41e-13,71;UBERON:0003059,7.41e-13,71;UBERON:0007282,7.41e-13,71;UBERON:0004290,7.41e-13,71;UBERON:0009618,7.41e-13,71;UBERON:0007524,9.49e-13,73;UBERON:0003077,1.81e-12,72;UBERON:0007285,1.81e-12,72;UBERON:0004872,7.96e-12,83;UBERON:0007503,7.12e-11,78;UBERON:0000486,2.71e-10,83;UBERON:0001637,1.39e-09,42;UBERON:0003509,1.39e-09,42;UBERON:0004572,1.39e-09,42;UBERON:0004573,1.21e-07,33;UBERON:0004571,1.21e-07,33;UBERON:0005256,3.74e-07,122;UBERON:0002049,5.03e-07,78;UBERON:0007798,5.03e-07,78;UBERON:0007500,5.62e-07,59;UBERON:0001981,5.62e-07,59;UBERON:0004537,5.62e-07,59;UBERON:0006965,5.62e-07,59;UBERON:0004457,8.67e-07,12;UBERON:0000042,8.67e-07,12 | |||
|phase1_expression=2.18014055124668,3.8538094300377,4.51054093107108,3.00219895059391,2.23480547213644,6.10636966870258,0,1.26343974685366,0.522371256399677,1.22866968250754,0,0.873765488520689,1.84636884759917,0.618831764800233,0,2.6893005858071,3.01347264011988,1.46062018077475,0.487932798790507,0.984968464614303,1.42800483870977,0.940364164434263,0.572471974262113,0.273748850145768,0.251085279189606,0.229240217243854,0,0.236132343941038,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,2.17366355134002,2.1686349143074,5.0133791063589,2.02785126545153,2.3858578411533,2.91980922181582,0.756278537312543,1.33037638477538,1.14185221401064,1.30979075497713,0,0,0,0,0,0,0,0,1.19257444420023,0,0,1.13061588384802,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.446498641420399,0.898117490504679,0.563057402416611,1.53316637465883,0,0.183201743930407,0,0,0,6.46063537203914,1.64619665163954,3.97227542439656,6.3104056564739,2.83734705758686,2.24271040056923,3.20246987189115,1.97334038733728,1.24484414159907,2.15537075311501,1.79808093424805,5.60022482286246,5.18558332031999,0.234321431833797,0,0.570471821544449,0.747243402759005,0.704606991862589,0.809364721840658,2.52811452064047,0.816616685019573,0.859840221182376,1.13658359293342,1.18800285728205,3.21447008062124,3.64064544775211,0,1.85169725349473,0.625592599359821,0.554128230968366,3.95079858792754,4.29082914118628,4.35690370829131,1.24775401476023,6.27863724911017,4.69826255400848,5.08636562782948,9.00273288253207,4.94652140344507,7.72921620136887,4.46680455195816,9.78902726999344,4.28722822709274,7.06814567883521,5.15479432396876,2.10139873864455,9.9402685904652,4.63459651847145,2.7129694769678,0.966304265816484,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0.310983165046111,0,0,3.12899064659632,2.57296375277154,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,1.47008711385542,0,0,0,0,0,0.857839051492628,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,1.15930404975077,1.6437217193015,0,0,0,0,0,0,0,0,1.87467667973554,2.68771405118175,0.708875486211932,0.447792613514241,0.871901815541886,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.308482478109971,0,0,2.01835951821649,3.05172048183296,1.0267360014933,5.94649892485778,0,2.535908257668,2.12750493267896,9.36066932202295,1.02882949704857,2.83698264046557,0.799266537048298,1.42977993658148,1.62786481617433,0.823240336780769,1.30294473717494,3.19852753868291,0.791951872933429,3.91871190177462,3.48613383440118,4.99864955910285,0,0,0,3.83399768786532,1.14861935834114,1.42636905040718,2.02693829334611,1.64381058040307,3.58121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,1.08506009479894,3.74347550755453,2.67643483195743,1.57702415033935,2.81139395982512,2.40756879782175,2.27407504055985,1.03473071292505,1.99267679560631,1.84369168541703,2.08520674723399,1.17480694477644,0,0,0,0,1.21251028578504,1.66435439510497,1.20956117331872,2.97729369382532,10.4354141835882,7.01650236082684,3.58789617915963,8.69902323413396,4.02134802859019,0,2.31314540703983,3.01854933032316,2.54594183642808,1.03850885836724,3.37010097533882,0,0.200506470303285,0.184161977871793,2.29628896329214,3.82391452814106,2.88473712910733,0.451199612907412,0.693138033939733,0,0,0.422206515571503,0,0,0.215915916102139,0,0.812839312631559,1.00337954770971,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0.976135183992909,1.03041011647722,1.19040304263846,1.07262349896764,0,0,1.6068392984416,1.93341436584244,0.462145851343933,0.460511024178389,1.65403886981437,0.966782203814463,1.16013355131383,0.767039646744908,1.51354460599453,1.15699440752685,1.34533047155574,2.80747967488085,0.50578890427775,0,10.7036197922418,0,2.7723022215848,2.66153015158511,2.60979897622522,1.8532421910392,2.28999818787186,1.48863347743867,2.53103539774981,3.24071329670502,1.02359116524534,3.42351190427136,2.86382923133343,0.78494864019923,1.97859703341646,2.19629623788844,1.41374882814824,1.41527737101321,1.58510321173008,3.79132610615083,0.48763373908959,2.43713489631284,0,3.13949796238367,1.55545975149084,4.52032466480971,1.10273068709225,1.32687795048244,2.63070531152258,1.15755106853338,0.655894752046633,3.04365565444056,1.8589409885985,1.40847801266121,1.29070216983646,1.96498082026242,2.85336841185,1.77380532035299,1.68886108238131,3.95153871551882,0,0.349934720244983,0.48111056362756,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,13.9226711935142,0,0,0.307160702099232,0,0.422008249231538,0.333926115068718,0,1.68900326502395,1.39473591775749,0.276283915531148,0,0.613612095012929,0,4.0435146396035,0,0,0,0.5918604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| ||
|short_description=p@chr16:65157630..65157695,- | |||
}} | }} |
Latest revision as of 10:58, 25 July 2015
Short description: | p@chr16:65157630..65157695, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:65157630..65157695, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.41e-22 | 76 |
muscle precursor cell | 4.25e-15 | 58 |
myoblast | 4.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.25e-15 | 58 |
smooth muscle cell | 1.00e-13 | 43 |
smooth muscle myoblast | 1.00e-13 | 43 |
muscle cell | 1.15e-13 | 55 |
multi fate stem cell | 1.33e-12 | 427 |
somatic stem cell | 4.12e-12 | 433 |
vascular associated smooth muscle cell | 2.37e-11 | 32 |
stem cell | 4.51e-11 | 441 |
electrically responsive cell | 5.01e-11 | 61 |
electrically active cell | 5.01e-11 | 61 |
skin fibroblast | 2.24e-09 | 23 |
preadipocyte | 4.37e-08 | 12 |
mesodermal cell | 1.26e-07 | 121 |
cardiocyte | 4.99e-07 | 16 |
extracellular matrix secreting cell | 6.25e-07 | 15 |
stromal cell | 6.54e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.49e-13 | 62 |
striated muscle tissue | 3.49e-13 | 62 |
myotome | 3.49e-13 | 62 |
muscle tissue | 3.77e-13 | 64 |
musculature | 3.77e-13 | 64 |
musculature of body | 3.77e-13 | 64 |
somite | 7.41e-13 | 71 |
presomitic mesoderm | 7.41e-13 | 71 |
presumptive segmental plate | 7.41e-13 | 71 |
dermomyotome | 7.41e-13 | 71 |
trunk paraxial mesoderm | 7.41e-13 | 71 |
dense mesenchyme tissue | 9.49e-13 | 73 |
paraxial mesoderm | 1.81e-12 | 72 |
presumptive paraxial mesoderm | 1.81e-12 | 72 |
splanchnic layer of lateral plate mesoderm | 7.96e-12 | 83 |
epithelial vesicle | 7.12e-11 | 78 |
multilaminar epithelium | 2.71e-10 | 83 |
artery | 1.39e-09 | 42 |
arterial blood vessel | 1.39e-09 | 42 |
arterial system | 1.39e-09 | 42 |
systemic artery | 1.21e-07 | 33 |
systemic arterial system | 1.21e-07 | 33 |
trunk mesenchyme | 3.74e-07 | 122 |
vasculature | 5.03e-07 | 78 |
vascular system | 5.03e-07 | 78 |
epithelial tube open at both ends | 5.62e-07 | 59 |
blood vessel | 5.62e-07 | 59 |
blood vasculature | 5.62e-07 | 59 |
vascular cord | 5.62e-07 | 59 |
cavity lining | 8.67e-07 | 12 |
serous membrane | 8.67e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.74e-10 | 14 |