FFCP PHASE1:Hg19::chr8:127837438..127837443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:127837438..127837443,+ | |||
|description=CAGE_peak_at_chr8:127837438..127837443,+ | |description=CAGE_peak_at_chr8:127837438..127837443,+ | ||
|id=chr8:127837438..127837443,+ | |id=chr8:127837438..127837443,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.48e-18;2!CL:0002563;1.12e-09;4!CL:0000624;8.72e-07;6!CL:0002543;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.48e-18,2;CL:0002563,1.12e-09,4;CL:0002543,8.02e-07,6;CL:0000624,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.58e-34;1!UBERON:0003056;2.07e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.58e-34;1!UBERON:0001785;2.58e-34;1!UBERON:0002464;2.58e-34;1!UBERON:0004904;2.58e-34;1!UBERON:0001021;2.58e-34;1!UBERON:0003714;6.48e-18;2!UBERON:0005162;6.48e-18;2!UBERON:0000122;6.48e-18;2!UBERON:0001052;1.12e-09;4!UBERON:0001242;1.12e-09;4!UBERON:0001262;1.12e-09;4!UBERON:0004786;1.12e-09;4!UBERON:0004808;1.12e-09;4!UBERON:0001277;1.12e-09;4!UBERON:0002346;1.50e-09;4!UBERON:0000923;1.50e-09;4!UBERON:0010316;1.50e-09;4!UBERON:0005291;1.50e-09;4!UBERON:0004907;5.35e-08;5!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.58e-34,1;UBERON:0001785,2.58e-34,1;UBERON:0002464,2.58e-34,1;UBERON:0004904,2.58e-34,1;UBERON:0001021,2.58e-34,1;UBERON:0003902,2.58e-34,1;UBERON:0005425,2.58e-34,1;UBERON:0003714,6.48e-18,2;UBERON:0005162,6.48e-18,2;UBERON:0000122,6.48e-18,2;UBERON:0001052,1.12e-09,4;UBERON:0001242,1.12e-09,4;UBERON:0001262,1.12e-09,4;UBERON:0004786,1.12e-09,4;UBERON:0004808,1.12e-09,4;UBERON:0001277,1.12e-09,4;UBERON:0001781,1.22e-09,4;UBERON:0004907,5.35e-08,5;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
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| ||
|short_description=p@chr8:127837438..127837443,+ | |short_description=p@chr8:127837438..127837443,+ | ||
}} | }} |
Latest revision as of 14:49, 31 July 2015
Short description: | p@chr8:127837438..127837443, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:127837438..127837443, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.48e-18 | 2 |
intestinal epithelial cell | 1.12e-09 | 4 |
vein endothelial cell | 8.02e-07 | 6 |
CD4-positive, alpha-beta T cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.58e-34 | 1 |
cranial nerve | 2.58e-34 | 1 |
nerve trunk | 2.58e-34 | 1 |
nerve connecting eye with brain | 2.58e-34 | 1 |
nerve | 2.58e-34 | 1 |
retinal neural layer | 2.58e-34 | 1 |
presumptive neural retina | 2.58e-34 | 1 |
neural tissue | 6.48e-18 | 2 |
multi cell component structure | 6.48e-18 | 2 |
neuron projection bundle | 6.48e-18 | 2 |
rectum | 1.12e-09 | 4 |
intestinal mucosa | 1.12e-09 | 4 |
wall of intestine | 1.12e-09 | 4 |
gastrointestinal system mucosa | 1.12e-09 | 4 |
gastrointestinal system epithelium | 1.12e-09 | 4 |
intestinal epithelium | 1.12e-09 | 4 |
layer of retina | 1.22e-09 | 4 |
lower digestive tract | 5.35e-08 | 5 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |