FFCP PHASE1:Hg19::chr16:83986837..83986852,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:83986837..83986852,+
|short_description=p1@OSGIN1
|description=CAGE_peak_1_at_OSGIN1_5end
|association_with_transcript=10bp_to_ENST00000393306,NM_182981,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29948 | |EntrezGene=29948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30093 | |HGNC=30093 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJX0 | |UniProt=Q9UJX0 | ||
|association_with_transcript=10bp_to_ENST00000393306,NM_182981,uc002fhc.2_5end | |||
|cluster_id=chr16:83986837..83986852,+ | |||
|coexpression_cluster_id=C1426 | |||
|description=CAGE_peak_1_at_OSGIN1_5end | |||
|id=chr16:83986837..83986852,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-19!42;CL:0000766!2.34e-19!76;CL:0002194!2.80e-19!63;CL:0000576!2.80e-19!63;CL:0000040!2.80e-19!63;CL:0000559!2.80e-19!63;CL:0000839!3.42e-19!70;CL:0002009!5.55e-19!65;CL:0000860!9.00e-18!45;CL:0000557!1.10e-17!71;CL:0000066!7.68e-15!254;CL:0000063!2.87e-11!578;CL:0000763!3.93e-08!112;CL:0000049!3.93e-08!112;CL:0000548!4.28e-07!679;CL:0000004!4.28e-07!679;CL:0000255!4.28e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-17;33!CL:0002057;1.35e-17;33!CL:0000473;5.51e-17;39!CL:0000234;5.51e-17;39!CL:0000576;1.36e-12;48!CL:0000766;3.26e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.04e-22,48;CL:0000234,2.04e-22,48;CL:0002194,2.31e-21,59;CL:0000576,2.31e-21,59;CL:0000040,2.31e-21,59;CL:0000559,2.31e-21,59;CL:0000766,3.75e-21,72;CL:0000839,4.27e-21,66;CL:0002009,5.51e-21,61;CL:0000860,1.32e-19,42;CL:0002057,1.32e-19,42;CL:0000557,1.61e-19,67;CL:0000066,1.89e-14,253;CL:0000763,1.62e-08,108;CL:0000049,1.62e-08,108;CL:0000223,6.10e-07,58;CL:0000213,9.74e-07,58;CL:0000215,9.74e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;7.08e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.05e-19!448;UBERON:0004120!4.05e-19!448;UBERON:0006603!4.05e-19!448;UBERON:0002405!1.66e-17!115;UBERON:0002371!1.11e-16!80;UBERON:0001474!2.02e-14!86;UBERON:0000062!2.06e-14!511;UBERON:0000468!2.05e-13!659;UBERON:0004765!3.94e-13!101;UBERON:0001434!3.94e-13!101;UBERON:0000467!5.13e-13!625;UBERON:0000480!5.86e-13!626;UBERON:0003081!2.41e-11!216;UBERON:0000923!3.22e-10!604;UBERON:0005291!3.22e-10!604;UBERON:0006598!3.22e-10!604;UBERON:0002532!3.22e-10!604;UBERON:0002050!4.91e-10!605;UBERON:0005423!4.91e-10!605;UBERON:0002204!1.94e-09!167;UBERON:0002193!4.20e-09!112;UBERON:0002390!1.08e-08!102;UBERON:0003061!1.08e-08!102;UBERON:0000922!1.49e-08!612;UBERON:0002100!1.59e-08!216;UBERON:0009569!2.87e-08!113;UBERON:0005177!2.05e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-18,76;UBERON:0004765,1.59e-16,90;UBERON:0001474,7.98e-16,82;UBERON:0002405,2.13e-15,93;UBERON:0001434,2.58e-14,100;UBERON:0003081,2.13e-11,203;UBERON:0000926,6.86e-11,315;UBERON:0004120,6.86e-11,315;UBERON:0006603,6.86e-11,315;UBERON:0002204,3.11e-10,167;UBERON:0002193,6.79e-10,108;UBERON:0002390,1.67e-09,98;UBERON:0003061,1.67e-09,98;UBERON:0005423,6.72e-09,581;UBERON:0000922,2.02e-08,592;UBERON:0009569,2.34e-08,112;UBERON:0002100,2.90e-08,199;UBERON:0005177,1.35e-07,101;UBERON:0002050,1.54e-07,564;UBERON:0000923,4.85e-07,560;UBERON:0010316,4.85e-07,560;UBERON:0005291,4.85e-07,560;UBERON:0006598,4.85e-07,560;UBERON:0010317,4.85e-07,560;UBERON:0002532,4.85e-07,560 | |||
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| ||
|short_description=p1@OSGIN1 | |||
}} | }} |
Latest revision as of 02:55, 18 September 2015
Short description: | p1@OSGIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSGIN1_5end |
Coexpression cluster: | C1426_CD14_bile_mucinous_lung_large_glioblastoma_nonsmall |
Association with transcript: | 10bp_to_ENST00000393306, NM_182981, uc002fhc.2_5end |
EntrezGene: | OSGIN1 |
HGNC: | 30093 |
UniProt: | Q9UJX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.04e-22 | 48 |
phagocyte | 2.04e-22 | 48 |
monopoietic cell | 2.31e-21 | 59 |
monocyte | 2.31e-21 | 59 |
monoblast | 2.31e-21 | 59 |
promonocyte | 2.31e-21 | 59 |
myeloid leukocyte | 3.75e-21 | 72 |
myeloid lineage restricted progenitor cell | 4.27e-21 | 66 |
macrophage dendritic cell progenitor | 5.51e-21 | 61 |
classical monocyte | 1.32e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-19 | 42 |
granulocyte monocyte progenitor cell | 1.61e-19 | 67 |
epithelial cell | 1.89e-14 | 253 |
myeloid cell | 1.62e-08 | 108 |
common myeloid progenitor | 1.62e-08 | 108 |
endodermal cell | 6.10e-07 | 58 |
lining cell | 9.74e-07 | 58 |
barrier cell | 9.74e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-18 | 76 |
skeletal element | 1.59e-16 | 90 |
bone element | 7.98e-16 | 82 |
immune system | 2.13e-15 | 93 |
skeletal system | 2.58e-14 | 100 |
lateral plate mesoderm | 2.13e-11 | 203 |
mesoderm | 6.86e-11 | 315 |
mesoderm-derived structure | 6.86e-11 | 315 |
presumptive mesoderm | 6.86e-11 | 315 |
musculoskeletal system | 3.11e-10 | 167 |
hemolymphoid system | 6.79e-10 | 108 |
hematopoietic system | 1.67e-09 | 98 |
blood island | 1.67e-09 | 98 |
developing anatomical structure | 6.72e-09 | 581 |
embryo | 2.02e-08 | 592 |
subdivision of trunk | 2.34e-08 | 112 |
trunk | 2.90e-08 | 199 |
trunk region element | 1.35e-07 | 101 |
embryonic structure | 1.54e-07 | 564 |
germ layer | 4.85e-07 | 560 |
germ layer / neural crest | 4.85e-07 | 560 |
embryonic tissue | 4.85e-07 | 560 |
presumptive structure | 4.85e-07 | 560 |
germ layer / neural crest derived structure | 4.85e-07 | 560 |
epiblast (generic) | 4.85e-07 | 560 |