FFCP PHASE1:Hg19::chr11:47430133..47430187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91252 | |EntrezGene=91252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20859 | |HGNC=20859 | ||
|TSSclassifier=strong | |||
|UniProt=Q96H72,E9PRH4,E9PNN7,E9PSA8 | |UniProt=Q96H72,E9PRH4,E9PNN7,E9PSA8 | ||
|association_with_transcript=0bp_to_ENST00000354884,ENST00000362021,ENST00000531419,ENST00000531865,ENST00000531974_5end | |association_with_transcript=0bp_to_ENST00000354884,ENST00000362021,ENST00000531419,ENST00000531865,ENST00000531974_5end | ||
|cluster_id=chr11:47430133..47430187,+ | |||
|description=CAGE_peak_1_at_SLC39A13_5end | |description=CAGE_peak_1_at_SLC39A13_5end | ||
|id=chr11:47430133..47430187,+ | |id=chr11:47430133..47430187,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.89e-36!180;CL:0002371!4.43e-31!591;CL:0000144!9.05e-27!625;CL:0000222!7.70e-22!119;CL:0000057!2.35e-19!75;CL:0000220!4.91e-19!246;CL:0000183!7.18e-19!59;CL:0002321!3.02e-18!248;CL:0000680!3.31e-18!57;CL:0000056!3.31e-18!57;CL:0000355!3.31e-18!57;CL:0000192!2.46e-17!42;CL:0000514!2.46e-17!42;CL:0000187!5.04e-17!54;CL:0000548!2.98e-16!679;CL:0000004!2.98e-16!679;CL:0000255!2.98e-16!679;CL:0000012!1.27e-15!682;CL:0000359!8.07e-14!32;CL:0000393!3.81e-13!60;CL:0000211!3.81e-13!60;CL:0000003!5.65e-11!722;CL:0000723!4.71e-09!436;CL:0000048!6.62e-09!430;CL:0000034!8.63e-08!444;CL:0002620!9.44e-08!23 | |ontology_enrichment_celltype=CL:0000055!2.89e-36!180;CL:0002371!4.43e-31!591;CL:0000144!9.05e-27!625;CL:0000222!7.70e-22!119;CL:0000057!2.35e-19!75;CL:0000220!4.91e-19!246;CL:0000183!7.18e-19!59;CL:0002321!3.02e-18!248;CL:0000680!3.31e-18!57;CL:0000056!3.31e-18!57;CL:0000355!3.31e-18!57;CL:0000192!2.46e-17!42;CL:0000514!2.46e-17!42;CL:0000187!5.04e-17!54;CL:0000548!2.98e-16!679;CL:0000004!2.98e-16!679;CL:0000255!2.98e-16!679;CL:0000012!1.27e-15!682;CL:0000359!8.07e-14!32;CL:0000393!3.81e-13!60;CL:0000211!3.81e-13!60;CL:0000003!5.65e-11!722;CL:0000723!4.71e-09!436;CL:0000048!6.62e-09!430;CL:0000034!8.63e-08!444;CL:0002620!9.44e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.51e-13;32!CL:0000192;1.29e-12;43!CL:0000187;1.46e-09;55!CL:0000134;1.09e-08;55!CL:0000057;3.15e-08;73!CL:0002620;8.77e-08;23!CL:0000723;2.26e-07;61!CL:0002320;3.60e-07;188!CL:0000048;4.33e-07;58!CL:0000393;6.08e-07;61!CL:0000211;6.08e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.54e-22,121;CL:0000057,1.04e-19,76;CL:0002321,1.06e-18,250;CL:0000680,2.00e-18,58;CL:0000056,2.00e-18,58;CL:0000355,2.00e-18,58;CL:0000192,1.57e-17,43;CL:0000514,1.57e-17,43;CL:0000187,3.05e-17,55;CL:0000359,8.06e-14,32;CL:0000393,2.29e-13,61;CL:0000211,2.29e-13,61;CL:0000723,1.90e-09,433;CL:0000048,2.68e-09,427;CL:0000034,3.76e-08,441;CL:0002620,9.43e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.29e-12;43!CL:0000355;7.38e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.33e-22!83;UBERON:0002329!3.33e-22!83;UBERON:0003077!3.33e-22!83;UBERON:0003059!3.33e-22!83;UBERON:0007282!3.33e-22!83;UBERON:0009618!3.33e-22!83;UBERON:0007285!3.33e-22!83;UBERON:0000486!6.69e-21!82;UBERON:0002049!4.40e-20!79;UBERON:0007798!4.40e-20!79;UBERON:0004290!7.05e-20!70;UBERON:0004872!7.70e-19!84;UBERON:0000055!2.32e-18!69;UBERON:0001981!1.12e-17!60;UBERON:0007500!1.12e-17!60;UBERON:0004537!1.12e-17!60;UBERON:0006965!1.12e-17!60;UBERON:0005256!1.37e-17!143;UBERON:0003914!1.89e-16!118;UBERON:0001134!2.21e-16!61;UBERON:0002036!2.21e-16!61;UBERON:0003082!2.21e-16!61;UBERON:0001637!2.61e-16!42;UBERON:0003509!2.61e-16!42;UBERON:0004572!2.61e-16!42;UBERON:0002385!1.30e-15!63;UBERON:0001015!1.30e-15!63;UBERON:0000383!1.30e-15!63;UBERON:0004535!8.71e-14!110;UBERON:0001009!1.57e-13!113;UBERON:0002100!2.77e-13!216;UBERON:0000490!3.42e-13!138;UBERON:0004573!6.12e-13!33;UBERON:0004571!6.12e-13!33;UBERON:0000468!2.17e-12!659;UBERON:0000467!4.05e-12!625;UBERON:0000480!5.26e-12!626;UBERON:0000926!8.62e-12!448;UBERON:0004120!8.62e-12!448;UBERON:0006603!8.62e-12!448;UBERON:0000475!6.11e-10!365;UBERON:0000119!8.70e-10!312;UBERON:0000483!1.11e-09!309;UBERON:0003102!2.50e-09!95;UBERON:0002204!4.18e-09!167;UBERON:0003081!4.54e-09!216;UBERON:0002199!6.49e-09!45;UBERON:0002416!6.49e-09!45;UBERON:0002097!5.11e-08!40;UBERON:0002050!2.22e-07!605;UBERON:0005423!2.22e-07!605;UBERON:0000923!2.66e-07!604;UBERON:0005291!2.66e-07!604;UBERON:0006598!2.66e-07!604;UBERON:0002532!2.66e-07!604;UBERON:0000947!2.98e-07!21;UBERON:0010191!2.98e-07!21;UBERON:0003104!7.00e-07!238;UBERON:0009142!7.00e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!3.33e-22!83;UBERON:0002329!3.33e-22!83;UBERON:0003077!3.33e-22!83;UBERON:0003059!3.33e-22!83;UBERON:0007282!3.33e-22!83;UBERON:0009618!3.33e-22!83;UBERON:0007285!3.33e-22!83;UBERON:0000486!6.69e-21!82;UBERON:0002049!4.40e-20!79;UBERON:0007798!4.40e-20!79;UBERON:0004290!7.05e-20!70;UBERON:0004872!7.70e-19!84;UBERON:0000055!2.32e-18!69;UBERON:0001981!1.12e-17!60;UBERON:0007500!1.12e-17!60;UBERON:0004537!1.12e-17!60;UBERON:0006965!1.12e-17!60;UBERON:0005256!1.37e-17!143;UBERON:0003914!1.89e-16!118;UBERON:0001134!2.21e-16!61;UBERON:0002036!2.21e-16!61;UBERON:0003082!2.21e-16!61;UBERON:0001637!2.61e-16!42;UBERON:0003509!2.61e-16!42;UBERON:0004572!2.61e-16!42;UBERON:0002385!1.30e-15!63;UBERON:0001015!1.30e-15!63;UBERON:0000383!1.30e-15!63;UBERON:0004535!8.71e-14!110;UBERON:0001009!1.57e-13!113;UBERON:0002100!2.77e-13!216;UBERON:0000490!3.42e-13!138;UBERON:0004573!6.12e-13!33;UBERON:0004571!6.12e-13!33;UBERON:0000468!2.17e-12!659;UBERON:0000467!4.05e-12!625;UBERON:0000480!5.26e-12!626;UBERON:0000926!8.62e-12!448;UBERON:0004120!8.62e-12!448;UBERON:0006603!8.62e-12!448;UBERON:0000475!6.11e-10!365;UBERON:0000119!8.70e-10!312;UBERON:0000483!1.11e-09!309;UBERON:0003102!2.50e-09!95;UBERON:0002204!4.18e-09!167;UBERON:0003081!4.54e-09!216;UBERON:0002199!6.49e-09!45;UBERON:0002416!6.49e-09!45;UBERON:0002097!5.11e-08!40;UBERON:0002050!2.22e-07!605;UBERON:0005423!2.22e-07!605;UBERON:0000923!2.66e-07!604;UBERON:0005291!2.66e-07!604;UBERON:0006598!2.66e-07!604;UBERON:0002532!2.66e-07!604;UBERON:0000947!2.98e-07!21;UBERON:0010191!2.98e-07!21;UBERON:0003104!7.00e-07!238;UBERON:0009142!7.00e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.94e-12;42!UBERON:0003509;4.94e-12;42!UBERON:0004572;4.94e-12;42!UBERON:0004573;8.00e-12;33!UBERON:0004571;8.00e-12;33!UBERON:0007500;2.79e-10;56!UBERON:0001981;2.79e-10;56!UBERON:0004537;2.79e-10;56!UBERON:0000055;1.44e-09;65!UBERON:0003914;4.34e-09;74!UBERON:0002049;1.56e-08;75!UBERON:0007798;1.56e-08;75!UBERON:0000947;2.97e-07;21!UBERON:0010191;2.97e-07;21!UBERON:0002384;4.91e-07;198!UBERON:0002097;6.75e-07;41 | |||
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| ||
|short_description=p1@SLC39A13 | |short_description=p1@SLC39A13 | ||
}} | }} |
Latest revision as of 05:25, 18 September 2015
Short description: | p1@SLC39A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC39A13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354884, ENST00000362021, ENST00000531419, ENST00000531865, ENST00000531974_5end |
EntrezGene: | SLC39A13 |
HGNC: | 20859 |
UniProt: | Q96H72E9PRH4E9PNN7E9PSA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.54e-22 | 121 |
fibroblast | 1.04e-19 | 76 |
embryonic cell | 1.06e-18 | 250 |
muscle precursor cell | 2.00e-18 | 58 |
myoblast | 2.00e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.00e-18 | 58 |
smooth muscle cell | 1.57e-17 | 43 |
smooth muscle myoblast | 1.57e-17 | 43 |
muscle cell | 3.05e-17 | 55 |
vascular associated smooth muscle cell | 8.06e-14 | 32 |
electrically responsive cell | 2.29e-13 | 61 |
electrically active cell | 2.29e-13 | 61 |
somatic stem cell | 1.90e-09 | 433 |
multi fate stem cell | 2.68e-09 | 427 |
stem cell | 3.76e-08 | 441 |
skin fibroblast | 9.43e-08 | 23 |