FFCP PHASE1:Hg19::chr16:15797878..15797905,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15797878..15797905,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr16:15797878..15797905,- | |description=CAGE_peak_at_chr16:15797878..15797905,- | ||
|id=chr16:15797878..15797905,- | |id=chr16:15797878..15797905,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.50e-10;65!UBERON:0004872;6.71e-10;7!UBERON:0002532;3.93e-08;206!UBERON:0010316;3.93e-08;206!UBERON:0006601;2.04e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.29e-89!115;UBERON:0001049!5.12e-26!57;UBERON:0005068!5.12e-26!57;UBERON:0006241!5.12e-26!57;UBERON:0007135!5.12e-26!57;UBERON:0001017!1.84e-20!82;UBERON:0003080!1.90e-20!42;UBERON:0002616!3.13e-20!59;UBERON:0005743!3.53e-20!86;UBERON:0003075!3.92e-20!86;UBERON:0007284!3.92e-20!86;UBERON:0002780!2.13e-19!41;UBERON:0001890!2.13e-19!41;UBERON:0006240!2.13e-19!41;UBERON:0002346!1.27e-18!90;UBERON:0000073!5.35e-18!94;UBERON:0001016!5.35e-18!94;UBERON:0000955!1.19e-17!69;UBERON:0006238!1.19e-17!69;UBERON:0000153!3.30e-15!129;UBERON:0007811!3.30e-15!129;UBERON:0001893!3.76e-15!34;UBERON:0002020!4.33e-15!34;UBERON:0003528!4.33e-15!34;UBERON:0002791!1.86e-14!33;UBERON:0000033!3.71e-14!123;UBERON:0001869!1.62e-13!32;UBERON:0002619!3.09e-13!22;UBERON:0004121!3.32e-13!169;UBERON:0003056!1.57e-12!61;UBERON:0000924!1.59e-12!173;UBERON:0006601!1.59e-12!173;UBERON:0001950!1.68e-11!20;UBERON:0000956!3.89e-11!25;UBERON:0000203!3.89e-11!25;UBERON:0000062!4.58e-11!511;UBERON:0000477!7.91e-10!286;UBERON:0002298!2.11e-09!8;UBERON:0000481!5.54e-09!347;UBERON:0000468!8.91e-09!659;UBERON:0004111!5.80e-08!241;UBERON:0000922!9.40e-08!612;UBERON:0000064!1.66e-07!219;UBERON:0001871!5.34e-07!7;UBERON:0000467!5.93e-07!625;UBERON:0000480!6.84e-07!626;UBERON:0003076!8.46e-07!15;UBERON:0003057!8.46e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.29e-89!115;UBERON:0001049!5.12e-26!57;UBERON:0005068!5.12e-26!57;UBERON:0006241!5.12e-26!57;UBERON:0007135!5.12e-26!57;UBERON:0001017!1.84e-20!82;UBERON:0003080!1.90e-20!42;UBERON:0002616!3.13e-20!59;UBERON:0005743!3.53e-20!86;UBERON:0003075!3.92e-20!86;UBERON:0007284!3.92e-20!86;UBERON:0002780!2.13e-19!41;UBERON:0001890!2.13e-19!41;UBERON:0006240!2.13e-19!41;UBERON:0002346!1.27e-18!90;UBERON:0000073!5.35e-18!94;UBERON:0001016!5.35e-18!94;UBERON:0000955!1.19e-17!69;UBERON:0006238!1.19e-17!69;UBERON:0000153!3.30e-15!129;UBERON:0007811!3.30e-15!129;UBERON:0001893!3.76e-15!34;UBERON:0002020!4.33e-15!34;UBERON:0003528!4.33e-15!34;UBERON:0002791!1.86e-14!33;UBERON:0000033!3.71e-14!123;UBERON:0001869!1.62e-13!32;UBERON:0002619!3.09e-13!22;UBERON:0004121!3.32e-13!169;UBERON:0003056!1.57e-12!61;UBERON:0000924!1.59e-12!173;UBERON:0006601!1.59e-12!173;UBERON:0001950!1.68e-11!20;UBERON:0000956!3.89e-11!25;UBERON:0000203!3.89e-11!25;UBERON:0000062!4.58e-11!511;UBERON:0000477!7.91e-10!286;UBERON:0002298!2.11e-09!8;UBERON:0000481!5.54e-09!347;UBERON:0000468!8.91e-09!659;UBERON:0004111!5.80e-08!241;UBERON:0000922!9.40e-08!612;UBERON:0000064!1.66e-07!219;UBERON:0001871!5.34e-07!7;UBERON:0000467!5.93e-07!625;UBERON:0000480!6.84e-07!626;UBERON:0003076!8.46e-07!15;UBERON:0003057!8.46e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.15e-20;114!UBERON:0004921;1.46e-08;33!UBERON:0006947;9.14e-08;3!UBERON:0004054;9.14e-08;3!UBERON:0003978;2.78e-07;3!UBERON:0000946;2.78e-07;3!UBERON:0000922;4.82e-07;49!UBERON:0003135;4.98e-07;11!UBERON:0000160;7.16e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.75e-77,114;UBERON:0011216,8.55e-11,223;UBERON:0001049,2.09e-08,56;UBERON:0005068,2.09e-08,56;UBERON:0006241,2.09e-08,56;UBERON:0007135,2.09e-08,56;UBERON:0000922,3.95e-08,592;UBERON:0003075,4.24e-08,82;UBERON:0007284,4.24e-08,82;UBERON:0005409,6.51e-08,25;UBERON:0010314,7.24e-08,132;UBERON:0006947,9.15e-08,3;UBERON:0004054,9.15e-08,3;UBERON:0005423,1.16e-07,581;UBERON:0002050,1.46e-07,564;UBERON:0002346,1.87e-07,86;UBERON:0003978,2.72e-07,3;UBERON:0009751,2.72e-07,3;UBERON:0000946,2.72e-07,3;UBERON:0002523,2.72e-07,3;UBERON:0005983,2.72e-07,3;UBERON:0002165,2.72e-07,3;UBERON:0002062,2.72e-07,3;UBERON:0007280,2.72e-07,3;UBERON:0000923,3.11e-07,560;UBERON:0010316,3.11e-07,560;UBERON:0005291,3.11e-07,560;UBERON:0006598,3.11e-07,560;UBERON:0010317,3.11e-07,560;UBERON:0002532,3.11e-07,560;UBERON:0001017,4.74e-07,81;UBERON:0003135,5.01e-07,11;UBERON:0000160,7.14e-07,17 | |||
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|short_description=p@chr16:15797878..15797905,- | |short_description=p@chr16:15797878..15797905,- | ||
}} | }} |
Latest revision as of 06:32, 25 July 2015
Short description: | p@chr16:15797878..15797905, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15797878..15797905, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.75e-77 | 114 |
organ system subdivision | 8.55e-11 | 223 |
neural tube | 2.09e-08 | 56 |
neural rod | 2.09e-08 | 56 |
future spinal cord | 2.09e-08 | 56 |
neural keel | 2.09e-08 | 56 |
embryo | 3.95e-08 | 592 |
neural plate | 4.24e-08 | 82 |
presumptive neural plate | 4.24e-08 | 82 |
gastrointestinal system | 6.51e-08 | 25 |
structure with developmental contribution from neural crest | 7.24e-08 | 132 |
male genital duct | 9.15e-08 | 3 |
internal male genitalia | 9.15e-08 | 3 |
developing anatomical structure | 1.16e-07 | 581 |
embryonic structure | 1.46e-07 | 564 |
neurectoderm | 1.87e-07 | 86 |
valve | 2.72e-07 | 3 |
cardiac mesenchyme | 2.72e-07 | 3 |
cardial valve | 2.72e-07 | 3 |
tunica intima | 2.72e-07 | 3 |
heart layer | 2.72e-07 | 3 |
endocardium | 2.72e-07 | 3 |
endocardial cushion | 2.72e-07 | 3 |
presumptive endocardium | 2.72e-07 | 3 |
germ layer | 3.11e-07 | 560 |
germ layer / neural crest | 3.11e-07 | 560 |
embryonic tissue | 3.11e-07 | 560 |
presumptive structure | 3.11e-07 | 560 |
germ layer / neural crest derived structure | 3.11e-07 | 560 |
epiblast (generic) | 3.11e-07 | 560 |
central nervous system | 4.74e-07 | 81 |
male reproductive organ | 5.01e-07 | 11 |
intestine | 7.14e-07 | 17 |