FFCP PHASE1:Hg19::chr9:98269700..98269723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt=Q13635,Q59FG5 | |UniProt=Q13635,Q59FG5 | ||
|association_with_transcript=-1bp_to_ENST00000429896,NM_001083606,uc010mrp.2_5end | |association_with_transcript=-1bp_to_ENST00000429896,NM_001083606,uc010mrp.2_5end | ||
|cluster_id=chr9:98269700..98269723,- | |||
|description=CAGE_peak_2_at_PTCH1_5end | |description=CAGE_peak_2_at_PTCH1_5end | ||
|id=chr9:98269700..98269723,- | |id=chr9:98269700..98269723,- | ||
|ontology_enrichment_celltype=CL:0000791!8.47e-11!18;CL:0000789!8.47e-11!18;CL:0002420!8.47e-11!18;CL:0002419!8.47e-11!18;CL:0000790!8.47e-11!18;CL:0000625!9.16e-09!11 | |ontology_enrichment_celltype=CL:0000791!8.47e-11!18;CL:0000789!8.47e-11!18;CL:0002420!8.47e-11!18;CL:0002419!8.47e-11!18;CL:0000790!8.47e-11!18;CL:0000625!9.16e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.36e-19;18!CL:0000789;2.36e-19;18!CL:0002419;2.36e-19;18!CL:0000625;2.16e-15;11!CL:0000084;3.04e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.25e-19,18;CL:0000789,7.25e-19,18;CL:0002420,7.25e-19,18;CL:0002419,7.25e-19,18;CL:0000790,7.25e-19,18;CL:0000625,2.76e-15,11;CL:0000084,6.31e-12,25;CL:0000827,6.31e-12,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.36e-19;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-27!115;UBERON:0001049!2.07e-09!57;UBERON:0005068!2.07e-09!57;UBERON:0006241!2.07e-09!57;UBERON:0007135!2.07e-09!57;UBERON:0000477!7.33e-08!286;UBERON:0002616!2.84e-07!59;UBERON:0002346!6.58e-07!90;UBERON:0000153!8.44e-07!129;UBERON:0007811!8.44e-07!129;UBERON:0001007!9.49e-07!155;UBERON:0001555!9.49e-07!155;UBERON:0007026!9.49e-07!155 | |ontology_enrichment_uberon=UBERON:0007023!1.96e-27!115;UBERON:0001049!2.07e-09!57;UBERON:0005068!2.07e-09!57;UBERON:0006241!2.07e-09!57;UBERON:0007135!2.07e-09!57;UBERON:0000477!7.33e-08!286;UBERON:0002616!2.84e-07!59;UBERON:0002346!6.58e-07!90;UBERON:0000153!8.44e-07!129;UBERON:0007811!8.44e-07!129;UBERON:0001007!9.49e-07!155;UBERON:0001555!9.49e-07!155;UBERON:0007026!9.49e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.06e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.46e-29,114;UBERON:0001049,1.87e-08,56;UBERON:0005068,1.87e-08,56;UBERON:0006241,1.87e-08,56;UBERON:0007135,1.87e-08,56;UBERON:0011216,2.45e-07,223;UBERON:0000073,3.69e-07,53;UBERON:0002616,3.69e-07,53 | |||
|phase1_expression=0.363356758541113,0.214100523890983,1.12763523276777,0,0.893922188854576,0.872338524100369,0,0.631719873426831,1.30592814099919,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0.572471974262113,0.958120975510189,0.125542639594803,0.152826811495903,0.328402357799783,0.157421562627358,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0.369754010166788,0,0.284338464974843,0,1.10799081706375,1.00272223735071,1.08505435357926,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,1.77901850772711,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,2.55722701147983,1.57204305099666,1.02800749499755,0.334372990781356,3.91106719960308,2.36723902867367,0,0,0.294605907474837,0,0,0.384273959177026,0,0,0,0,1.63115219478266,0.535081656179426,0,0,2.29932296161153,0.68725489096526,0.759059076058509,2.22995790026868,3.25541726928209,6.65316431113862,3.312652619711,4.22355816809581,2.49861453104692,4.2619905367923,2.46338399076314,4.63695509416885,4.27904313253612,5.21367853978076,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,0,0.973269740605272,0.283604451492204,0.221729397462564,0.43917392846563,0.916853528483988,0.364295288292542,0.370784442784429,0.324547393654683,0.522389211897802,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,1.33888245105868,0.402829317109147,0.760272105718513,1.22031028774085,0.367663080345869,0.81014194788176,0.357198913136319,0.898117490504679,1.0135033243499,0,0,0,0,0,0,0,0.379891534993739,0.662045904066094,0.573673241497627,0,0,0,0,0.311211035399766,0.942974704487816,0.817309515567294,0.151357427644931,0.576175924479999,0.70296429550139,0,0,0,0.469737994575059,0.485618833104395,0.421352420106746,0.204154171254893,0.245668634623536,0.619954687054593,0,0.494533858557114,0.910161361938026,0.718618141816238,0.336672227908132,0.250237039743928,0.277064115484183,1.75591048352335,0,0.751190294532984,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.515262646192195,0,0.558350568994769,0.506328996723799,0.487185025805993,0.757301322732344,0.552299391853796,0.484938170456436,0.710019185033229,0.403008392910561,0.508681776931463,0.386521706326594,0,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,0,0,1.77236972004421,0.882926198829301,1.10689594688802,0,0.439001141634502,0,0.301586917234893,0.277765335475589,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0.577465791044295,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0,0.425325291727159,0,0,0.766765358330422,0,0.704387472105808,0.829312462163088,0.864719720501769,1.51490920111656,0.317489471460845,0.381988425558278,0,0,1.23392991243988,0.300343057843917,0,0.336393253036082,0.43596006883328,0.07333828582095,0.646358578788889,0,0.845302752556,0,1.04007436911366,0,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,1.42156779497018,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.00876629594175,2.36436912242313,3.88129634747131,5.26206448746968,0,1.30139853857622,0,0.335032530668698,0,0,0,0,1.2269149171914,1.50051156317903,0.542530047399471,0.207970861530807,0,0.788512075169673,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0.391602314925481,0.686286847621712,1.03384013061444,1.2942852049117,2.881644060693,2.12189300012382,0,0.30239029332968,0,0.153461973288062,0.841980283299221,0.512556597022804,0.511707249066704,0.321707842287215,0,0.771048469013278,0.177561725313127,0.164254312027618,0,0.116210378459959,0.483437798366489,0.200506470303285,0.736647911487171,0.229628896329213,0,0.262248829918848,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.211103257785751,2.27466768141793,0.340187410553031,0,0,0.812839312631559,1.00337954770971,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.9273691048295,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.770243085573222,0.614014698904518,0.551346289938122,0.644521469209642,0.435050081742686,0.170453254832202,0.0890320356467374,0.330569830721956,0.576570202095319,0.510450849978337,0.50578890427775,0,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0,0,0.255897791311334,0.855877976067841,0.95460974377781,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.687743287091848,0,0,0.21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| ||
|short_description=p2@PTCH1 | |short_description=p2@PTCH1 | ||
}} | }} |
Latest revision as of 10:53, 18 September 2015
Short description: | p2@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000429896, NM_001083606, uc010mrp.2_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | Q13635Q59FG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.25e-19 | 18 |
alpha-beta T cell | 7.25e-19 | 18 |
immature T cell | 7.25e-19 | 18 |
mature T cell | 7.25e-19 | 18 |
immature alpha-beta T cell | 7.25e-19 | 18 |
CD8-positive, alpha-beta T cell | 2.76e-15 | 11 |
T cell | 6.31e-12 | 25 |
pro-T cell | 6.31e-12 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.46e-29 | 114 |
neural tube | 1.87e-08 | 56 |
neural rod | 1.87e-08 | 56 |
future spinal cord | 1.87e-08 | 56 |
neural keel | 1.87e-08 | 56 |
organ system subdivision | 2.45e-07 | 223 |
regional part of nervous system | 3.69e-07 | 53 |
regional part of brain | 3.69e-07 | 53 |