FFCP PHASE1:Hg19::chr12:6484722..6484736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000542260,ENST00000544882_5end | |association_with_transcript=0bp_to_ENST00000542260,ENST00000544882_5end | ||
|cluster_id=chr12:6484722..6484736,- | |||
|coexpression_cluster_id=C3317 | |||
|description=CAGE_peak_2_at_SCNN1A_5end | |description=CAGE_peak_2_at_SCNN1A_5end | ||
|id=chr12:6484722..6484736,- | |id=chr12:6484722..6484736,- | ||
|ontology_enrichment_celltype=CL:0000066!1.07e-23!254;CL:0002076!7.81e-17!43;CL:0000223!1.63e-16!59;CL:0002368!6.27e-11!13;CL:0002202!3.90e-08!9;CL:0002632!3.90e-08!9;CL:0000082!6.72e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.07e-23!254;CL:0002076!7.81e-17!43;CL:0000223!1.63e-16!59;CL:0002368!6.27e-11!13;CL:0002202!3.90e-08!9;CL:0002632!3.90e-08!9;CL:0000082!6.72e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.85e-14;42!CL:0002368;6.93e-12;13!CL:1000507;7.91e-09;10!CL:1000494;7.91e-09;10!CL:0002202;2.49e-08;9!CL:0002632;2.49e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.59e-20,253;CL:0002076,3.55e-18,42;CL:0000223,5.17e-17,58;CL:0002368,6.87e-12,13;CL:1000507,7.80e-09,10;CL:1000494,7.80e-09,10;CL:0002202,2.38e-08,9;CL:0002632,2.38e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000223;3.24e-09;58!UBERON:0006595;4.42e-07;86!UBERON:0009117;8.97e-07;10!UBERON:0005564;8.97e-07;10 | |||
|ontology_enrichment_disease=DOID:305!2.22e-16!106;DOID:0050687!1.27e-11!143;DOID:299!1.44e-07!25 | |ontology_enrichment_disease=DOID:305!2.22e-16!106;DOID:0050687!1.27e-11!143;DOID:299!1.44e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;4.47e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.55e-15,106;DOID:299,4.05e-10,25;DOID:0050687,6.30e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.64e-26!169;UBERON:0000925!4.64e-26!169;UBERON:0006595!4.64e-26!169;UBERON:0004921!3.50e-21!129;UBERON:0004185!3.50e-21!129;UBERON:0001007!9.62e-21!155;UBERON:0001555!9.62e-21!155;UBERON:0007026!9.62e-21!155;UBERON:0000464!2.97e-20!104;UBERON:0000466!1.54e-19!126;UBERON:0000077!1.34e-18!130;UBERON:0005177!6.28e-15!107;UBERON:0001041!2.35e-13!98;UBERON:0001008!1.74e-12!45;UBERON:0005153!2.73e-12!37;UBERON:0001004!4.30e-12!72;UBERON:0005911!5.16e-12!82;UBERON:0006554!7.65e-12!44;UBERON:0000062!5.13e-11!511;UBERON:0005178!5.99e-11!34;UBERON:0002224!5.99e-11!34;UBERON:0000065!9.92e-11!53;UBERON:0002553!1.24e-10!70;UBERON:0005181!2.09e-10!35;UBERON:0000160!1.40e-09!27;UBERON:0000058!1.57e-09!26;UBERON:0005157!2.66e-09!51;UBERON:0000481!3.12e-09!347;UBERON:0005409!3.39e-09!35;UBERON:0002048!3.94e-09!22;UBERON:0000117!3.94e-09!22;UBERON:0000171!3.94e-09!22;UBERON:0000170!3.94e-09!22;UBERON:0005597!3.94e-09!22;UBERON:0000118!3.94e-09!22;UBERON:0003886!7.73e-09!63;UBERON:0000922!1.03e-08!612;UBERON:0009569!1.99e-08!113;UBERON:0001048!2.04e-08!168;UBERON:0005156!2.68e-08!59;UBERON:0000990!2.68e-08!59;UBERON:0003104!4.66e-08!238;UBERON:0009142!4.66e-08!238;UBERON:0003064!5.12e-08!37;UBERON:0008947!1.23e-07!38;UBERON:0003258!1.23e-07!38;UBERON:0000468!1.31e-07!659;UBERON:0002113!1.36e-07!27;UBERON:0003918!1.36e-07!27;UBERON:0005095!1.36e-07!27;UBERON:0007687!1.36e-07!27;UBERON:0003101!1.54e-07!22;UBERON:0000079!1.54e-07!22;UBERON:0000064!1.56e-07!219;UBERON:0000161!2.30e-07!35;UBERON:0000489!2.33e-07!32;UBERON:0003135!3.29e-07!11;UBERON:0000063!4.68e-07!97;UBERON:0003133!4.68e-07!48;UBERON:0000072!6.15e-07!46;UBERON:0007196!6.20e-07!14;UBERON:0001558!6.20e-07!14;UBERON:0002108!6.23e-07!14;UBERON:0004802!6.72e-07!19;UBERON:0000115!6.72e-07!19;UBERON:0000467!7.99e-07!625;UBERON:0007023!8.20e-07!115;UBERON:0000080!8.49e-07!18;UBERON:0002120!8.49e-07!18;UBERON:0004875!8.49e-07!18;UBERON:0005721!8.49e-07!18;UBERON:0005754!8.49e-07!18;UBERON:0007297!8.49e-07!18;UBERON:0000480!9.70e-07!626 | |ontology_enrichment_uberon=UBERON:0004119!4.64e-26!169;UBERON:0000925!4.64e-26!169;UBERON:0006595!4.64e-26!169;UBERON:0004921!3.50e-21!129;UBERON:0004185!3.50e-21!129;UBERON:0001007!9.62e-21!155;UBERON:0001555!9.62e-21!155;UBERON:0007026!9.62e-21!155;UBERON:0000464!2.97e-20!104;UBERON:0000466!1.54e-19!126;UBERON:0000077!1.34e-18!130;UBERON:0005177!6.28e-15!107;UBERON:0001041!2.35e-13!98;UBERON:0001008!1.74e-12!45;UBERON:0005153!2.73e-12!37;UBERON:0001004!4.30e-12!72;UBERON:0005911!5.16e-12!82;UBERON:0006554!7.65e-12!44;UBERON:0000062!5.13e-11!511;UBERON:0005178!5.99e-11!34;UBERON:0002224!5.99e-11!34;UBERON:0000065!9.92e-11!53;UBERON:0002553!1.24e-10!70;UBERON:0005181!2.09e-10!35;UBERON:0000160!1.40e-09!27;UBERON:0000058!1.57e-09!26;UBERON:0005157!2.66e-09!51;UBERON:0000481!3.12e-09!347;UBERON:0005409!3.39e-09!35;UBERON:0002048!3.94e-09!22;UBERON:0000117!3.94e-09!22;UBERON:0000171!3.94e-09!22;UBERON:0000170!3.94e-09!22;UBERON:0005597!3.94e-09!22;UBERON:0000118!3.94e-09!22;UBERON:0003886!7.73e-09!63;UBERON:0000922!1.03e-08!612;UBERON:0009569!1.99e-08!113;UBERON:0001048!2.04e-08!168;UBERON:0005156!2.68e-08!59;UBERON:0000990!2.68e-08!59;UBERON:0003104!4.66e-08!238;UBERON:0009142!4.66e-08!238;UBERON:0003064!5.12e-08!37;UBERON:0008947!1.23e-07!38;UBERON:0003258!1.23e-07!38;UBERON:0000468!1.31e-07!659;UBERON:0002113!1.36e-07!27;UBERON:0003918!1.36e-07!27;UBERON:0005095!1.36e-07!27;UBERON:0007687!1.36e-07!27;UBERON:0003101!1.54e-07!22;UBERON:0000079!1.54e-07!22;UBERON:0000064!1.56e-07!219;UBERON:0000161!2.30e-07!35;UBERON:0000489!2.33e-07!32;UBERON:0003135!3.29e-07!11;UBERON:0000063!4.68e-07!97;UBERON:0003133!4.68e-07!48;UBERON:0000072!6.15e-07!46;UBERON:0007196!6.20e-07!14;UBERON:0001558!6.20e-07!14;UBERON:0002108!6.23e-07!14;UBERON:0004802!6.72e-07!19;UBERON:0000115!6.72e-07!19;UBERON:0000467!7.99e-07!625;UBERON:0007023!8.20e-07!115;UBERON:0000080!8.49e-07!18;UBERON:0002120!8.49e-07!18;UBERON:0004875!8.49e-07!18;UBERON:0005721!8.49e-07!18;UBERON:0005754!8.49e-07!18;UBERON:0007297!8.49e-07!18;UBERON:0000480!9.70e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.33e-12;33!UBERON:0006554;2.77e-11;30!UBERON:0001008;2.77e-11;30!UBERON:0005178;1.99e-10;34!UBERON:0002224;1.99e-10;34!UBERON:0005409;1.28e-09;22!UBERON:0005181;2.43e-09;35!UBERON:0004211;7.91e-09;10!UBERON:0009773;7.91e-09;10!UBERON:0001231;7.91e-09;10!UBERON:0004810;7.91e-09;10!UBERON:0002048;1.41e-08;22!UBERON:0000117;1.41e-08;22!UBERON:0000171;1.41e-08;22!UBERON:0000170;1.41e-08;22!UBERON:0000160;5.72e-08;17!UBERON:0000489;2.89e-07;29!UBERON:0002113;3.42e-07;24!UBERON:0011143;3.42e-07;24!UBERON:0003101;6.02e-07;22!UBERON:0000079;6.02e-07;22!UBERON:0007196;6.84e-07;15!UBERON:0001558;6.84e-07;15!UBERON:0000065;8.29e-07;44 | |||
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| ||
|short_description=p2@SCNN1A | |short_description=p2@SCNN1A | ||
}} | }} |
Latest revision as of 20:52, 19 September 2015
Short description: | p2@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCNN1A_5end |
Coexpression cluster: | C3317_smallcell_lung_merkel_small_kidney_bronchioalveolar_Renal |
Association with transcript: | 0bp_to_ENST00000542260, ENST00000544882_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.59e-20 | 253 |
endo-epithelial cell | 3.55e-18 | 42 |
endodermal cell | 5.17e-17 | 58 |
respiratory epithelial cell | 6.87e-12 | 13 |
kidney tubule cell | 7.80e-09 | 10 |
nephron tubule epithelial cell | 7.80e-09 | 10 |
epithelial cell of tracheobronchial tree | 2.38e-08 | 9 |
epithelial cell of lower respiratory tract | 2.38e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.55e-15 | 106 |
adenocarcinoma | 4.05e-10 | 25 |
cell type cancer | 6.30e-10 | 143 |