FFCP PHASE1:Hg19::chr14:36988691..36988705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000521945_5end | |association_with_transcript=20bp_to_ENST00000521945_5end | ||
|cluster_id=chr14:36988691..36988705,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_3_at_ENST00000521945_5end | |description=CAGE_peak_3_at_ENST00000521945_5end | ||
|id=chr14:36988691..36988705,- | |id=chr14:36988691..36988705,- | ||
|ontology_enrichment_celltype=CL:0000082!1.32e-08!19;CL:0000322!2.55e-07!3;CL:0002605!6.27e-07!3 | |ontology_enrichment_celltype=CL:0000082!1.32e-08!19;CL:0000322!2.55e-07!3;CL:0002605!6.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;5.71e-11;3!CL:0000082;5.72e-10;19!CL:0002553;5.31e-09;1!CL:0000167;6.99e-09;1!CL:0000164;6.99e-09;1!CL:0000502;6.99e-09;1!CL:0000172;6.99e-09;1!CL:0000173;6.99e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,5.16e-11,3;CL:0000082,5.51e-10,19;CL:0002553,5.31e-09,1;CL:0000167,7.27e-09,1;CL:0000164,7.27e-09,1;CL:0000502,7.27e-09,1;CL:0000172,7.27e-09,1;CL:0000173,7.27e-09,1;CL:0002351,7.27e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.06e-25;5!UBERON:0008947;3.38e-16;29!UBERON:0001041;4.11e-12;30!CL:0002351;6.99e-09;1 | |||
|ontology_enrichment_disease=DOID:0050615!2.64e-07!16 | |ontology_enrichment_disease=DOID:0050615!2.64e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3112;2.93e-09;1!DOID:4430;6.99e-09;1!DOID:1324;1.83e-08;15!DOID:3905;2.41e-08;9!DOID:0050615;6.07e-08;16!DOID:3908;4.49e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.05e-09,1;DOID:4430,7.27e-09,1;DOID:1324,1.81e-08,15;DOID:3905,2.38e-08,9;DOID:0050615,6.02e-08,16;DOID:3908,4.43e-07,5 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.06e-25,5;UBERON:0004117,1.06e-25,5;UBERON:0007689,1.06e-25,5;UBERON:0007123,1.06e-25,5;UBERON:0003091,1.06e-25,5;UBERON:0002048,1.04e-21,22;UBERON:0000117,1.04e-21,22;UBERON:0000171,1.04e-21,22;UBERON:0000170,1.04e-21,22;UBERON:0005597,1.04e-21,22;UBERON:0000118,1.04e-21,22;UBERON:0005178,3.71e-17,34;UBERON:0002224,3.71e-17,34;UBERON:0005181,1.25e-16,35;UBERON:0000341,2.56e-16,2;UBERON:0005153,9.62e-16,37;UBERON:0008947,3.29e-15,38;UBERON:0003258,3.29e-15,38;UBERON:0005911,8.36e-14,82;UBERON:0005157,4.18e-12,47;UBERON:0009722,8.50e-12,11;UBERON:0007690,8.50e-12,11;UBERON:0004821,5.16e-11,3;UBERON:0003215,5.16e-11,3;UBERON:0010368,5.16e-11,3;UBERON:0009911,5.16e-11,3;UBERON:0002299,5.16e-11,3;UBERON:0006524,5.16e-11,3;UBERON:0008874,5.16e-11,3;UBERON:0002169,5.16e-11,3;UBERON:0004894,5.16e-11,3;UBERON:0000915,9.46e-11,52;UBERON:0000065,2.66e-10,54;UBERON:0004802,5.51e-10,19;UBERON:0000115,5.51e-10,19;UBERON:0002171,1.60e-09,1;UBERON:0006518,1.60e-09,1;UBERON:0008949,1.60e-09,1;UBERON:0000101,1.60e-09,1;UBERON:0002167,1.60e-09,1;UBERON:0001007,6.63e-08,145;UBERON:0001555,6.63e-08,145;UBERON:0007026,6.63e-08,145;UBERON:0008814,2.97e-07,18;UBERON:0001004,3.75e-07,74;UBERON:0004119,6.22e-07,160;UBERON:0000925,6.22e-07,160;UBERON:0006595,6.22e-07,160 | |||
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|short_description=p3@ENST00000521945 | |short_description=p3@ENST00000521945 | ||
}} | }} |
Latest revision as of 20:31, 24 July 2015
Short description: | p3@ENST00000521945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000521945_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 20bp_to_ENST00000521945_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 5.16e-11 | 3 |
epithelial cell of lung | 5.51e-10 | 19 |
lung fibroblast | 5.31e-09 | 1 |
peptide hormone secreting cell | 7.27e-09 | 1 |
enteroendocrine cell | 7.27e-09 | 1 |
type D enteroendocrine cell | 7.27e-09 | 1 |
somatostatin secreting cell | 7.27e-09 | 1 |
pancreatic D cell | 7.27e-09 | 1 |
progenitor cell of endocrine pancreas | 7.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.05e-09 | 1 |
somatostatinoma | 7.27e-09 | 1 |
lung cancer | 1.81e-08 | 15 |
lung carcinoma | 2.38e-08 | 9 |
respiratory system cancer | 6.02e-08 | 16 |
non-small cell lung carcinoma | 4.43e-07 | 5 |