FFCP PHASE1:Hg19::chr14:72975302..72975305,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:72975302..72975305,+ | |||
|description=CAGE_peak_at_chr14:72975302..72975305,+ | |description=CAGE_peak_at_chr14:72975302..72975305,+ | ||
|id=chr14:72975302..72975305,+ | |id=chr14:72975302..72975305,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.96e-33!57;UBERON:0005068!5.96e-33!57;UBERON:0006241!5.96e-33!57;UBERON:0007135!5.96e-33!57;UBERON:0002020!1.17e-31!34;UBERON:0003528!1.17e-31!34;UBERON:0001893!1.50e-31!34;UBERON:0001869!2.69e-31!32;UBERON:0002791!5.33e-30!33;UBERON:0002780!7.37e-30!41;UBERON:0001890!7.37e-30!41;UBERON:0006240!7.37e-30!41;UBERON:0003080!5.78e-29!42;UBERON:0007023!7.80e-29!115;UBERON:0002616!4.51e-27!59;UBERON:0001017!6.76e-27!82;UBERON:0002346!1.40e-25!90;UBERON:0005743!3.89e-25!86;UBERON:0000955!1.51e-24!69;UBERON:0006238!1.51e-24!69;UBERON:0003075!5.20e-24!86;UBERON:0007284!5.20e-24!86;UBERON:0000956!2.17e-22!25;UBERON:0000203!2.17e-22!25;UBERON:0000073!1.01e-21!94;UBERON:0001016!1.01e-21!94;UBERON:0002619!1.27e-20!22;UBERON:0001950!4.31e-20!20;UBERON:0003056!1.55e-17!61;UBERON:0000153!6.69e-13!129;UBERON:0007811!6.69e-13!129;UBERON:0000200!9.01e-13!6;UBERON:0000033!2.96e-12!123;UBERON:0000924!5.73e-12!173;UBERON:0006601!5.73e-12!173;UBERON:0004121!6.60e-11!169;UBERON:0002308!9.86e-11!9;UBERON:0000125!9.86e-11!9;UBERON:0000369!1.44e-09!4;UBERON:0002435!1.44e-09!4;UBERON:0000204!1.44e-09!4;UBERON:0010082!1.44e-09!4;UBERON:0001871!3.56e-09!7;UBERON:0002420!2.13e-08!9;UBERON:0007245!2.13e-08!9;UBERON:0010009!2.13e-08!9;UBERON:0010011!2.13e-08!9;UBERON:0000454!2.13e-08!9;UBERON:0000025!6.80e-08!194;UBERON:0009663!1.11e-07!7;UBERON:0005383!1.15e-07!3;UBERON:0005382!1.15e-07!3;UBERON:0002771!5.40e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!5.96e-33!57;UBERON:0005068!5.96e-33!57;UBERON:0006241!5.96e-33!57;UBERON:0007135!5.96e-33!57;UBERON:0002020!1.17e-31!34;UBERON:0003528!1.17e-31!34;UBERON:0001893!1.50e-31!34;UBERON:0001869!2.69e-31!32;UBERON:0002791!5.33e-30!33;UBERON:0002780!7.37e-30!41;UBERON:0001890!7.37e-30!41;UBERON:0006240!7.37e-30!41;UBERON:0003080!5.78e-29!42;UBERON:0007023!7.80e-29!115;UBERON:0002616!4.51e-27!59;UBERON:0001017!6.76e-27!82;UBERON:0002346!1.40e-25!90;UBERON:0005743!3.89e-25!86;UBERON:0000955!1.51e-24!69;UBERON:0006238!1.51e-24!69;UBERON:0003075!5.20e-24!86;UBERON:0007284!5.20e-24!86;UBERON:0000956!2.17e-22!25;UBERON:0000203!2.17e-22!25;UBERON:0000073!1.01e-21!94;UBERON:0001016!1.01e-21!94;UBERON:0002619!1.27e-20!22;UBERON:0001950!4.31e-20!20;UBERON:0003056!1.55e-17!61;UBERON:0000153!6.69e-13!129;UBERON:0007811!6.69e-13!129;UBERON:0000200!9.01e-13!6;UBERON:0000033!2.96e-12!123;UBERON:0000924!5.73e-12!173;UBERON:0006601!5.73e-12!173;UBERON:0004121!6.60e-11!169;UBERON:0002308!9.86e-11!9;UBERON:0000125!9.86e-11!9;UBERON:0000369!1.44e-09!4;UBERON:0002435!1.44e-09!4;UBERON:0000204!1.44e-09!4;UBERON:0010082!1.44e-09!4;UBERON:0001871!3.56e-09!7;UBERON:0002420!2.13e-08!9;UBERON:0007245!2.13e-08!9;UBERON:0010009!2.13e-08!9;UBERON:0010011!2.13e-08!9;UBERON:0000454!2.13e-08!9;UBERON:0000025!6.80e-08!194;UBERON:0009663!1.11e-07!7;UBERON:0005383!1.15e-07!3;UBERON:0005382!1.15e-07!3;UBERON:0002771!5.40e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-50;2!UBERON:0002757;2.74e-50;2!UBERON:0010134;2.74e-50;2!UBERON:0005408;2.74e-50;2!UBERON:0001899;2.74e-50;2!UBERON:0002702;4.52e-50;2!UBERON:0001870;5.96e-34;3!UBERON:0003296;5.56e-26;4!UBERON:0010133;5.56e-26;4!UBERON:0002784;5.56e-26;4!UBERON:0000200;9.07e-18;6!UBERON:0001894;1.65e-15;7!UBERON:0002780;8.57e-09;41!UBERON:0001890;8.57e-09;41!UBERON:0000073;7.98e-07;53!UBERON:0002616;7.98e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.74e-50,2;UBERON:0002757,2.74e-50,2;UBERON:0010134,2.74e-50,2;UBERON:0005408,2.74e-50,2;UBERON:0001899,2.74e-50,2;UBERON:0002702,4.52e-50,2;UBERON:0001870,5.96e-34,3;UBERON:0003296,5.56e-26,4;UBERON:0010133,5.56e-26,4;UBERON:0002784,5.56e-26,4;UBERON:0000200,9.07e-18,6;UBERON:0001894,1.65e-15,7;UBERON:0006222,1.65e-15,7;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.390178042679635,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0.293016358543788,0.121360521749513,0.66866030566487,0,0,0,0,0,0.984685914873589,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.338693328263138,0,0.408610218334727,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0.1251909307065,0,0.110929051536852,0.434674820589684,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0.132864840313363,0.327130788511688,0.327609848846413,0,0,0.39997479170986,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0,0.756215088665154,0.345786262321089,0.807378228159255,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.270150338473579,0.781078098613847,0,0.570742291745161,0,0,0.496211178389294,0,0.127762427639595,0,2.01770233331294,0,0,0,0,0,0.339848664884159,0.789273282754189,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.785233868459781,0,0.8453114551668,0,0,0,0.89947040332436,0,0,0,0,0,0,0,0.339957450954573,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.390178042679635,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0.293016358543788,0.121360521749513,0.66866030566487,0,0,0,0,0,0.984685914873589,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.338693328263138,0,0.408610218334727,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0.1251909307065,0,0.110929051536852,0.434674820589684,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0.132864840313363,0.327130788511688,0.327609848846413,0,0,0.39997479170986,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0,0.756215088665154,0.345786262321089,0.807378228159255,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.270150338473579,0.781078098613847,0,0.570742291745161,0,0,0.496211178389294,0,0.127762427639595,0,2.01770233331294,0,0,0,0,0,0.339848664884159,0.789273282754189,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.785233868459781,0,0.8453114551668,0,0,0,0.89947040332436,0,0,0,0,0,0,0,0.339957450954573,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr14:72975302..72975305,+ | |short_description=p@chr14:72975302..72975305,+ | ||
}} | }} |
Latest revision as of 22:29, 24 July 2015
Short description: | p@chr14:72975302..72975305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:72975302..72975305, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.74e-50 | 2 |
regional part of epithalamus | 2.74e-50 | 2 |
secretory circumventricular organ | 2.74e-50 | 2 |
circumventricular organ | 2.74e-50 | 2 |
epithalamus | 2.74e-50 | 2 |
middle frontal gyrus | 4.52e-50 | 2 |
frontal cortex | 5.96e-34 | 3 |
gland of diencephalon | 5.56e-26 | 4 |
neuroendocrine gland | 5.56e-26 | 4 |
regional part of diencephalon | 5.56e-26 | 4 |
gyrus | 9.07e-18 | 6 |
diencephalon | 1.65e-15 | 7 |
future diencephalon | 1.65e-15 | 7 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |