FFCP PHASE1:Hg19::chr1:160183899..160183921,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8682 | |EntrezGene=8682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8822 | |HGNC=8822 | ||
|TSSclassifier=strong | |||
|UniProt=Q14801 | |UniProt=Q14801 | ||
|association_with_transcript=40bp_to_L37385_5end | |association_with_transcript=40bp_to_L37385_5end | ||
|cluster_id=chr1:160183899..160183921,+ | |||
|description=CAGE_peak_12_at_PEA15_5end | |description=CAGE_peak_12_at_PEA15_5end | ||
|id=chr1:160183899..160183921,+ | |id=chr1:160183899..160183921,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.38e-08!180;CL:0000359!1.03e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.38e-08!180;CL:0000359!1.03e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.51e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.85e-08,32;CL:0000192,4.76e-07,43;CL:0000514,4.76e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0005743!9.55e-15!86;UBERON:0001017!1.00e-14!82;UBERON:0002616!1.49e-13!59;UBERON:0000073!4.59e-13!94;UBERON:0001016!4.59e-13!94;UBERON:0000468!1.49e-12!659;UBERON:0007023!2.25e-12!115;UBERON:0000467!4.09e-12!625;UBERON:0000480!6.69e-12!626;UBERON:0000955!2.72e-11!69;UBERON:0006238!2.72e-11!69;UBERON:0004111!5.53e-11!241;UBERON:0000477!8.13e-11!286;UBERON:0003080!2.28e-10!42;UBERON:0000025!2.59e-10!194;UBERON:0003075!3.03e-10!86;UBERON:0007284!3.03e-10!86;UBERON:0000475!6.89e-10!365;UBERON:0002780!8.12e-10!41;UBERON:0001890!8.12e-10!41;UBERON:0006240!8.12e-10!41;UBERON:0002050!8.87e-10!605;UBERON:0005423!8.87e-10!605;UBERON:0000483!9.69e-10!309;UBERON:0000923!1.13e-09!604;UBERON:0005291!1.13e-09!604;UBERON:0006598!1.13e-09!604;UBERON:0002532!1.13e-09!604;UBERON:0004121!1.26e-09!169;UBERON:0000119!2.13e-09!312;UBERON:0000922!2.23e-09!612;UBERON:0001893!4.04e-09!34;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0002791!5.62e-09!33;UBERON:0002346!6.37e-09!90;UBERON:0000924!9.47e-09!173;UBERON:0006601!9.47e-09!173;UBERON:0001869!2.86e-08!32;UBERON:0000033!3.10e-08!123;UBERON:0000153!3.98e-07!129;UBERON:0007811!3.98e-07!129;UBERON:0004872!6.63e-07!84 | |ontology_enrichment_uberon=UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0005743!9.55e-15!86;UBERON:0001017!1.00e-14!82;UBERON:0002616!1.49e-13!59;UBERON:0000073!4.59e-13!94;UBERON:0001016!4.59e-13!94;UBERON:0000468!1.49e-12!659;UBERON:0007023!2.25e-12!115;UBERON:0000467!4.09e-12!625;UBERON:0000480!6.69e-12!626;UBERON:0000955!2.72e-11!69;UBERON:0006238!2.72e-11!69;UBERON:0004111!5.53e-11!241;UBERON:0000477!8.13e-11!286;UBERON:0003080!2.28e-10!42;UBERON:0000025!2.59e-10!194;UBERON:0003075!3.03e-10!86;UBERON:0007284!3.03e-10!86;UBERON:0000475!6.89e-10!365;UBERON:0002780!8.12e-10!41;UBERON:0001890!8.12e-10!41;UBERON:0006240!8.12e-10!41;UBERON:0002050!8.87e-10!605;UBERON:0005423!8.87e-10!605;UBERON:0000483!9.69e-10!309;UBERON:0000923!1.13e-09!604;UBERON:0005291!1.13e-09!604;UBERON:0006598!1.13e-09!604;UBERON:0002532!1.13e-09!604;UBERON:0004121!1.26e-09!169;UBERON:0000119!2.13e-09!312;UBERON:0000922!2.23e-09!612;UBERON:0001893!4.04e-09!34;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0002791!5.62e-09!33;UBERON:0002346!6.37e-09!90;UBERON:0000924!9.47e-09!173;UBERON:0006601!9.47e-09!173;UBERON:0001869!2.86e-08!32;UBERON:0000033!3.10e-08!123;UBERON:0000153!3.98e-07!129;UBERON:0007811!3.98e-07!129;UBERON:0004872!6.63e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;5.69e-08;32!UBERON:0002780;1.02e-07;41!UBERON:0001890;1.02e-07;41!UBERON:0001016;1.40e-07;83!UBERON:0002619;1.43e-07;22!UBERON:0001869;3.75e-07;32!UBERON:0000073;5.68e-07;53!UBERON:0002616;5.68e-07;53!UBERON:0001950;6.26e-07;20!UBERON:0003528;7.17e-07;34!UBERON:0002020;7.17e-07;34 | |||
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| ||
|short_description=p12@PEA15 | |short_description=p12@PEA15 | ||
}} | }} |
Latest revision as of 01:36, 18 September 2015
Short description: | p12@PEA15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PEA15_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_L37385_5end |
EntrezGene: | PEA15 |
HGNC: | 8822 |
UniProt: | Q14801 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.85e-08 | 32 |
smooth muscle cell | 4.76e-07 | 43 |
smooth muscle myoblast | 4.76e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.38e-13 | 56 |
neural rod | 4.38e-13 | 56 |
future spinal cord | 4.38e-13 | 56 |
neural keel | 4.38e-13 | 56 |
central nervous system | 4.28e-12 | 81 |
nervous system | 4.94e-11 | 89 |
regional part of nervous system | 2.86e-10 | 53 |
regional part of brain | 2.86e-10 | 53 |
regional part of forebrain | 9.52e-10 | 41 |
forebrain | 9.52e-10 | 41 |
anterior neural tube | 9.52e-10 | 41 |
future forebrain | 9.52e-10 | 41 |
neural plate | 4.22e-09 | 82 |
presumptive neural plate | 4.22e-09 | 82 |
ecto-epithelium | 5.32e-09 | 104 |
regional part of telencephalon | 1.61e-08 | 32 |
adult organism | 2.07e-08 | 114 |
neurectoderm | 2.46e-08 | 86 |
brain | 4.49e-08 | 68 |
future brain | 4.49e-08 | 68 |
brain grey matter | 8.32e-08 | 34 |
gray matter | 8.32e-08 | 34 |
telencephalon | 8.32e-08 | 34 |
tube | 2.36e-07 | 192 |
regional part of cerebral cortex | 2.42e-07 | 22 |
cerebral hemisphere | 3.21e-07 | 32 |