FFCP PHASE1:Hg19::chr2:61244339..61244364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150962 | |EntrezGene=150962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26505 | |HGNC=26505 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUL8,Q3MIT2 | |UniProt=A8MUL8,Q3MIT2 | ||
|association_with_transcript=-11bp_to_ENST00000398658,ENST00000407787,ENST00000430495,uc002saq.1,uc010fci.2_5end | |association_with_transcript=-11bp_to_ENST00000398658,ENST00000407787,ENST00000430495,uc002saq.1,uc010fci.2_5end | ||
|cluster_id=chr2:61244339..61244364,- | |||
|description=CAGE_peak_1_at_PUS10_5end | |description=CAGE_peak_1_at_PUS10_5end | ||
|id=chr2:61244339..61244364,- | |id=chr2:61244339..61244364,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.44e-08!51;DOID:0060083!5.44e-08!51;DOID:1240!1.47e-07!39 | |ontology_enrichment_disease=DOID:2531!5.44e-08!51;DOID:0060083!5.44e-08!51;DOID:1240!1.47e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.99e-08,39;DOID:2531,1.94e-07,51;DOID:0060083,1.94e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0001049!4.66e-10!57;UBERON:0005068!4.66e-10!57;UBERON:0006241!4.66e-10!57;UBERON:0007135!4.66e-10!57;UBERON:0007023!4.76e-10!115;UBERON:0003080!1.26e-09!42;UBERON:0002346!1.31e-09!90;UBERON:0001893!5.01e-09!34;UBERON:0002616!1.15e-08!59;UBERON:0002791!1.33e-08!33;UBERON:0003075!1.77e-08!86;UBERON:0007284!1.77e-08!86;UBERON:0000073!1.99e-08!94;UBERON:0001016!1.99e-08!94;UBERON:0001869!2.07e-08!32;UBERON:0002020!3.10e-08!34;UBERON:0003528!3.10e-08!34;UBERON:0000955!4.03e-08!69;UBERON:0006238!4.03e-08!69;UBERON:0000153!4.75e-08!129;UBERON:0007811!4.75e-08!129;UBERON:0003056!9.04e-08!61;UBERON:0001017!9.47e-08!82;UBERON:0005743!9.89e-08!86;UBERON:0000033!3.45e-07!123 | |ontology_enrichment_uberon=UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0001049!4.66e-10!57;UBERON:0005068!4.66e-10!57;UBERON:0006241!4.66e-10!57;UBERON:0007135!4.66e-10!57;UBERON:0007023!4.76e-10!115;UBERON:0003080!1.26e-09!42;UBERON:0002346!1.31e-09!90;UBERON:0001893!5.01e-09!34;UBERON:0002616!1.15e-08!59;UBERON:0002791!1.33e-08!33;UBERON:0003075!1.77e-08!86;UBERON:0007284!1.77e-08!86;UBERON:0000073!1.99e-08!94;UBERON:0001016!1.99e-08!94;UBERON:0001869!2.07e-08!32;UBERON:0002020!3.10e-08!34;UBERON:0003528!3.10e-08!34;UBERON:0000955!4.03e-08!69;UBERON:0006238!4.03e-08!69;UBERON:0000153!4.75e-08!129;UBERON:0007811!4.75e-08!129;UBERON:0003056!9.04e-08!61;UBERON:0001017!9.47e-08!82;UBERON:0005743!9.89e-08!86;UBERON:0000033!3.45e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.07e-08;34!UBERON:0002791;9.31e-08;32!UBERON:0001869;1.26e-07;32!UBERON:0002780;1.45e-07;41!UBERON:0001890;1.45e-07;41!UBERON:0003528;2.51e-07;34!UBERON:0002020;2.51e-07;34!UBERON:0001950;2.69e-07;20!UBERON:0000956;8.19e-07;25!UBERON:0000203;8.19e-07;25!UBERON:0002619;8.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.84e-11,41;UBERON:0001890,3.84e-11,41;UBERON:0003080,3.84e-11,41;UBERON:0006240,3.84e-11,41;UBERON:0001049,1.72e-10,56;UBERON:0005068,1.72e-10,56;UBERON:0006241,1.72e-10,56;UBERON:0007135,1.72e-10,56;UBERON:0000073,2.05e-10,53;UBERON:0002616,2.05e-10,53;UBERON:0002346,2.34e-10,86;UBERON:0001893,2.57e-10,34;UBERON:0001869,1.41e-09,32;UBERON:0003056,1.49e-09,61;UBERON:0002791,1.90e-09,32;UBERON:0003528,2.95e-09,34;UBERON:0002020,2.95e-09,34;UBERON:0003075,5.00e-09,82;UBERON:0007284,5.00e-09,82;UBERON:0007023,8.18e-09,114;UBERON:0000955,1.96e-08,68;UBERON:0006238,1.96e-08,68;UBERON:0001016,2.82e-08,89;UBERON:0001017,9.37e-08,81;UBERON:0001950,9.46e-08,20;UBERON:0000956,1.65e-07,25;UBERON:0000203,1.65e-07,25;UBERON:0002619,2.33e-07,22;UBERON:0010314,7.32e-07,132 | |||
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| ||
|short_description=p1@PUS10 | |short_description=p1@PUS10 | ||
}} | }} |
Latest revision as of 21:01, 17 September 2015
Short description: | p1@PUS10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PUS10_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000398658, ENST00000407787, ENST00000430495, uc002saq.1, uc010fci.2_5end |
EntrezGene: | PUS10 |
HGNC: | 26505 |
UniProt: | A8MUL8Q3MIT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.84e-11 | 41 |
forebrain | 3.84e-11 | 41 |
anterior neural tube | 3.84e-11 | 41 |
future forebrain | 3.84e-11 | 41 |
neural tube | 1.72e-10 | 56 |
neural rod | 1.72e-10 | 56 |
future spinal cord | 1.72e-10 | 56 |
neural keel | 1.72e-10 | 56 |
regional part of nervous system | 2.05e-10 | 53 |
regional part of brain | 2.05e-10 | 53 |
neurectoderm | 2.34e-10 | 86 |
telencephalon | 2.57e-10 | 34 |
cerebral hemisphere | 1.41e-09 | 32 |
pre-chordal neural plate | 1.49e-09 | 61 |
regional part of telencephalon | 1.90e-09 | 32 |
brain grey matter | 2.95e-09 | 34 |
gray matter | 2.95e-09 | 34 |
neural plate | 5.00e-09 | 82 |
presumptive neural plate | 5.00e-09 | 82 |
adult organism | 8.18e-09 | 114 |
brain | 1.96e-08 | 68 |
future brain | 1.96e-08 | 68 |
nervous system | 2.82e-08 | 89 |
central nervous system | 9.37e-08 | 81 |
neocortex | 9.46e-08 | 20 |
cerebral cortex | 1.65e-07 | 25 |
pallium | 1.65e-07 | 25 |
regional part of cerebral cortex | 2.33e-07 | 22 |
structure with developmental contribution from neural crest | 7.32e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.99e-08 | 39 |
hematologic cancer | 1.94e-07 | 51 |
immune system cancer | 1.94e-07 | 51 |