FFCP PHASE1:Hg19::chr3:49027647..49027696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54681 | |EntrezGene=54681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28858 | |HGNC=28858 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-74bp_to_ENST00000475629_5end | |association_with_transcript=-74bp_to_ENST00000475629_5end | ||
|cluster_id=chr3:49027647..49027696,+ | |||
|description=CAGE_peak_1_at_P4HTM_5end | |description=CAGE_peak_1_at_P4HTM_5end | ||
|id=chr3:49027647..49027696,+ | |id=chr3:49027647..49027696,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.66e-31!115;UBERON:0001049!3.24e-23!57;UBERON:0005068!3.24e-23!57;UBERON:0006241!3.24e-23!57;UBERON:0007135!3.24e-23!57;UBERON:0002780!4.46e-19!41;UBERON:0001890!4.46e-19!41;UBERON:0006240!4.46e-19!41;UBERON:0002616!2.20e-18!59;UBERON:0003080!2.20e-18!42;UBERON:0005743!1.01e-17!86;UBERON:0003075!2.01e-17!86;UBERON:0007284!2.01e-17!86;UBERON:0000073!3.79e-17!94;UBERON:0001016!3.79e-17!94;UBERON:0000955!1.17e-16!69;UBERON:0006238!1.17e-16!69;UBERON:0001017!7.56e-16!82;UBERON:0002020!8.88e-15!34;UBERON:0003528!8.88e-15!34;UBERON:0002346!9.08e-15!90;UBERON:0001893!9.71e-15!34;UBERON:0002791!3.09e-14!33;UBERON:0001869!1.50e-13!32;UBERON:0003056!2.34e-13!61;UBERON:0002619!3.25e-11!22;UBERON:0000956!2.05e-10!25;UBERON:0000203!2.05e-10!25;UBERON:0001950!2.27e-10!20;UBERON:0000153!3.01e-09!129;UBERON:0007811!3.01e-09!129;UBERON:0000033!5.28e-09!123;UBERON:0000062!1.51e-07!511;UBERON:0000025!2.83e-07!194;UBERON:0004121!8.38e-07!169;UBERON:0000064!9.07e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!6.66e-31!115;UBERON:0001049!3.24e-23!57;UBERON:0005068!3.24e-23!57;UBERON:0006241!3.24e-23!57;UBERON:0007135!3.24e-23!57;UBERON:0002780!4.46e-19!41;UBERON:0001890!4.46e-19!41;UBERON:0006240!4.46e-19!41;UBERON:0002616!2.20e-18!59;UBERON:0003080!2.20e-18!42;UBERON:0005743!1.01e-17!86;UBERON:0003075!2.01e-17!86;UBERON:0007284!2.01e-17!86;UBERON:0000073!3.79e-17!94;UBERON:0001016!3.79e-17!94;UBERON:0000955!1.17e-16!69;UBERON:0006238!1.17e-16!69;UBERON:0001017!7.56e-16!82;UBERON:0002020!8.88e-15!34;UBERON:0003528!8.88e-15!34;UBERON:0002346!9.08e-15!90;UBERON:0001893!9.71e-15!34;UBERON:0002791!3.09e-14!33;UBERON:0001869!1.50e-13!32;UBERON:0003056!2.34e-13!61;UBERON:0002619!3.25e-11!22;UBERON:0000956!2.05e-10!25;UBERON:0000203!2.05e-10!25;UBERON:0001950!2.27e-10!20;UBERON:0000153!3.01e-09!129;UBERON:0007811!3.01e-09!129;UBERON:0000033!5.28e-09!123;UBERON:0000062!1.51e-07!511;UBERON:0000025!2.83e-07!194;UBERON:0004121!8.38e-07!169;UBERON:0000064!9.07e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.24e-14;41!UBERON:0001890;5.24e-14;41!UBERON:0000073;3.46e-13;53!UBERON:0002616;3.46e-13;53!UBERON:0001893;9.89e-13;34!UBERON:0003528;1.00e-12;34!UBERON:0002020;1.00e-12;34!UBERON:0002791;2.12e-12;32!UBERON:0001869;2.46e-12;32!UBERON:0002619;2.96e-11;22!UBERON:0000956;1.88e-10;25!UBERON:0000203;1.88e-10;25!UBERON:0001950;2.10e-10;20!UBERON:0007023;3.98e-09;114!UBERON:0000955;1.60e-08;68!UBERON:0001017;5.61e-08;75!UBERON:0001016;4.51e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.08e-30,114;UBERON:0001049,7.04e-24,56;UBERON:0005068,7.04e-24,56;UBERON:0006241,7.04e-24,56;UBERON:0007135,7.04e-24,56;UBERON:0000073,1.93e-22,53;UBERON:0002616,1.93e-22,53;UBERON:0002780,4.44e-19,41;UBERON:0001890,4.44e-19,41;UBERON:0003080,4.44e-19,41;UBERON:0006240,4.44e-19,41;UBERON:0003075,1.68e-18,82;UBERON:0007284,1.68e-18,82;UBERON:0000955,4.31e-17,68;UBERON:0006238,4.31e-17,68;UBERON:0001017,3.25e-16,81;UBERON:0002346,1.10e-15,86;UBERON:0001016,1.11e-15,89;UBERON:0003528,8.85e-15,34;UBERON:0002020,8.85e-15,34;UBERON:0001893,9.67e-15,34;UBERON:0003056,2.56e-14,61;UBERON:0002791,1.19e-13,32;UBERON:0001869,1.49e-13,32;UBERON:0011216,1.91e-12,223;UBERON:0002619,3.24e-11,22;UBERON:0000956,2.05e-10,25;UBERON:0000203,2.05e-10,25;UBERON:0001950,2.26e-10,20;UBERON:0010371,4.65e-10,104;UBERON:0010314,5.20e-10,132;UBERON:0000025,1.20e-07,192 | |||
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| ||
|short_description=p1@P4HTM | |short_description=p1@P4HTM | ||
}} | }} |
Latest revision as of 15:23, 18 September 2015
Short description: | p1@P4HTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_P4HTM_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_ENST00000475629_5end |
EntrezGene: | P4HTM |
HGNC: | 28858 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.08e-30 | 114 |
neural tube | 7.04e-24 | 56 |
neural rod | 7.04e-24 | 56 |
future spinal cord | 7.04e-24 | 56 |
neural keel | 7.04e-24 | 56 |
regional part of nervous system | 1.93e-22 | 53 |
regional part of brain | 1.93e-22 | 53 |
regional part of forebrain | 4.44e-19 | 41 |
forebrain | 4.44e-19 | 41 |
anterior neural tube | 4.44e-19 | 41 |
future forebrain | 4.44e-19 | 41 |
neural plate | 1.68e-18 | 82 |
presumptive neural plate | 1.68e-18 | 82 |
brain | 4.31e-17 | 68 |
future brain | 4.31e-17 | 68 |
central nervous system | 3.25e-16 | 81 |
neurectoderm | 1.10e-15 | 86 |
nervous system | 1.11e-15 | 89 |
brain grey matter | 8.85e-15 | 34 |
gray matter | 8.85e-15 | 34 |
telencephalon | 9.67e-15 | 34 |
pre-chordal neural plate | 2.56e-14 | 61 |
regional part of telencephalon | 1.19e-13 | 32 |
cerebral hemisphere | 1.49e-13 | 32 |
organ system subdivision | 1.91e-12 | 223 |
regional part of cerebral cortex | 3.24e-11 | 22 |
cerebral cortex | 2.05e-10 | 25 |
pallium | 2.05e-10 | 25 |
neocortex | 2.26e-10 | 20 |
ecto-epithelium | 4.65e-10 | 104 |
structure with developmental contribution from neural crest | 5.20e-10 | 132 |
tube | 1.20e-07 | 192 |