FFCP PHASE1:Hg19::chr10:102505147..102505162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5076 | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |HGNC=8616 | ||
|TSSclassifier=strong | |||
|UniProt=Q02962 | |UniProt=Q02962 | ||
|association_with_transcript=-305bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | |association_with_transcript=-305bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | ||
|cluster_id=chr10:102505147..102505162,+ | |||
|coexpression_cluster_id=C1556 | |coexpression_cluster_id=C1556 | ||
|description=CAGE_peak_9_at_PAX2_5end | |description=CAGE_peak_9_at_PAX2_5end | ||
|id=chr10:102505147..102505162,+ | |id=chr10:102505147..102505162,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.69e-14!12;CL:1000494!3.69e-14!12;CL:1000497!3.84e-13!18;CL:0002518!3.84e-13!18;CL:1000449!1.44e-10!16;CL:0000650!3.04e-10!3;CL:1000618!3.04e-10!3;CL:1001318!3.04e-10!3;CL:0002173!3.04e-10!3;CL:1000500!3.04e-10!3 | |ontology_enrichment_celltype=CL:1000507!3.69e-14!12;CL:1000494!3.69e-14!12;CL:1000497!3.84e-13!18;CL:0002518!3.84e-13!18;CL:1000449!1.44e-10!16;CL:0000650!3.04e-10!3;CL:1000618!3.04e-10!3;CL:1001318!3.04e-10!3;CL:0002173!3.04e-10!3;CL:1000500!3.04e-10!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.55e-98;2!UBERON:0005754;6.58e-50;1!UBERON:0003918;9.93e-21;10!UBERON:0007687;9.93e-21;10!UBERON:0003104;1.23e-07;31 | |||
|ontology_enrichment_disease=DOID:3347!2.90e-08!1 | |ontology_enrichment_disease=DOID:3347!2.90e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@PAX2 | |short_description=p9@PAX2 | ||
}} | }} |
Latest revision as of 22:09, 15 September 2015
Short description: | p9@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | -305bp_to_ENST00000355243, ENST00000361791, ENST00000370294, ENST00000370296, ENST00000428433, NM_000278, NM_003987, NM_003988, NM_003989, NM_003990, uc001krk.3, uc001krl.3, uc001krm.3, uc001krn.3, uc001kro.3, uc010qps.1_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | Q02962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data