FFCP PHASE1:Hg19::chr10:134823232..134823267,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:134823232..134823267,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:134823232..134823267,+ | |description=CAGE_peak_at_chr10:134823232..134823267,+ | ||
|id=chr10:134823232..134823267,+ | |id=chr10:134823232..134823267,+ | ||
|ontology_enrichment_celltype=CL:0000766!9.03e-73!76;CL:0002009!2.66e-71!65;CL:0002194!2.63e-68!63;CL:0000576!2.63e-68!63;CL:0000040!2.63e-68!63;CL:0000559!2.63e-68!63;CL:0000860!1.22e-66!45;CL:0000557!8.60e-66!71;CL:0002057!1.98e-63!42;CL:0000839!1.09e-61!70;CL:0000763!3.73e-51!112;CL:0000049!3.73e-51!112;CL:0000738!7.62e-49!140;CL:0002087!6.35e-39!119;CL:0002031!1.26e-36!124;CL:0000037!3.95e-35!172;CL:0000566!3.95e-35!172;CL:0002032!6.57e-34!165;CL:0000837!6.57e-34!165;CL:0000988!7.39e-32!182;CL:0002393!5.57e-14!9;CL:0002397!5.57e-14!9;CL:0000235!1.33e-10!10;CL:0000990!6.96e-10!8;CL:0000094!2.41e-09!8;CL:0000453!7.97e-08!5;CL:0000451!9.14e-08!10;CL:0000134!2.83e-07!358;CL:0002320!8.92e-07!365 | |ontology_enrichment_celltype=CL:0000766!9.03e-73!76;CL:0002009!2.66e-71!65;CL:0002194!2.63e-68!63;CL:0000576!2.63e-68!63;CL:0000040!2.63e-68!63;CL:0000559!2.63e-68!63;CL:0000860!1.22e-66!45;CL:0000557!8.60e-66!71;CL:0002057!1.98e-63!42;CL:0000839!1.09e-61!70;CL:0000763!3.73e-51!112;CL:0000049!3.73e-51!112;CL:0000738!7.62e-49!140;CL:0002087!6.35e-39!119;CL:0002031!1.26e-36!124;CL:0000037!3.95e-35!172;CL:0000566!3.95e-35!172;CL:0002032!6.57e-34!165;CL:0000837!6.57e-34!165;CL:0000988!7.39e-32!182;CL:0002393!5.57e-14!9;CL:0002397!5.57e-14!9;CL:0000235!1.33e-10!10;CL:0000990!6.96e-10!8;CL:0000094!2.41e-09!8;CL:0000453!7.97e-08!5;CL:0000451!9.14e-08!10;CL:0000134!2.83e-07!358;CL:0002320!8.92e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-86;33!CL:0002057;4.67e-86;33!CL:0000473;4.10e-79;39!CL:0000234;4.10e-79;39!CL:0000576;8.47e-70;48!CL:0000766;4.31e-57;69!CL:0000763;2.22e-24;100!CL:0002393;7.23e-18;6!CL:0002397;7.23e-18;6!CL:0000738;8.73e-17;136!CL:0000094;1.14e-16;8!CL:0002087;4.07e-16;104!CL:0000081;7.65e-12;11!CL:0000235;2.53e-11;6!CL:0000988;8.68e-10;177!CL:0000775;1.81e-09;3!CL:0000767;3.68e-09;3!CL:0000875;5.33e-09;3!CL:0002396;5.33e-09;3!CL:0000219;1.08e-07;193!CL:0001014;5.74e-07;2!CL:0001016;5.74e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.26e-129,48;CL:0000234,1.26e-129,48;CL:0000766,1.22e-121,72;CL:0002009,2.43e-120,61;CL:0000860,1.05e-119,42;CL:0002057,1.05e-119,42;CL:0002194,1.06e-114,59;CL:0000576,1.06e-114,59;CL:0000040,1.06e-114,59;CL:0000559,1.06e-114,59;CL:0000557,1.42e-108,67;CL:0000839,2.19e-101,66;CL:0000763,3.19e-86,108;CL:0000049,3.19e-86,108;CL:0000738,2.19e-68,136;CL:0002087,1.06e-55,115;CL:0002031,2.65e-55,120;CL:0002032,1.85e-53,161;CL:0000837,1.85e-53,161;CL:0000037,8.78e-53,168;CL:0000988,2.10e-49,177;CL:0002393,3.98e-25,9;CL:0002397,3.98e-25,9;CL:0000134,1.23e-18,354;CL:0002320,5.32e-18,361;CL:0000094,9.93e-17,8;CL:0000219,9.20e-16,386;CL:0000048,4.99e-13,427;CL:0000723,1.19e-12,433;CL:0000034,3.64e-12,441;CL:0000081,6.96e-12,11;CL:0000235,2.34e-11,6;CL:0000775,1.39e-09,3;CL:0000767,4.31e-09,3;CL:0000875,5.73e-09,3;CL:0002396,5.73e-09,3;CL:0001014,5.66e-07,2;CL:0001016,5.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.45e-85;42!CL:0000049;1.90e-23;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.13e-65!102;UBERON:0003061!4.13e-65!102;UBERON:0002193!8.71e-59!112;UBERON:0002371!4.07e-56!80;UBERON:0001474!8.53e-51!86;UBERON:0002405!6.48e-41!115;UBERON:0004765!2.79e-40!101;UBERON:0001434!2.79e-40!101;UBERON:0003081!2.66e-23!216;UBERON:0002204!6.60e-17!167;UBERON:0000926!2.24e-11!448;UBERON:0004120!2.24e-11!448;UBERON:0006603!2.24e-11!448;UBERON:0000178!7.18e-10!15;UBERON:0000179!7.18e-10!15;UBERON:0000463!7.18e-10!15 | |ontology_enrichment_uberon=UBERON:0002390!4.13e-65!102;UBERON:0003061!4.13e-65!102;UBERON:0002193!8.71e-59!112;UBERON:0002371!4.07e-56!80;UBERON:0001474!8.53e-51!86;UBERON:0002405!6.48e-41!115;UBERON:0004765!2.79e-40!101;UBERON:0001434!2.79e-40!101;UBERON:0003081!2.66e-23!216;UBERON:0002204!6.60e-17!167;UBERON:0000926!2.24e-11!448;UBERON:0004120!2.24e-11!448;UBERON:0006603!2.24e-11!448;UBERON:0000178!7.18e-10!15;UBERON:0000179!7.18e-10!15;UBERON:0000463!7.18e-10!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-94,76;UBERON:0001474,1.35e-86,82;UBERON:0002390,3.80e-86,98;UBERON:0003061,3.80e-86,98;UBERON:0004765,7.77e-78,90;UBERON:0002193,5.41e-77,108;UBERON:0002405,6.18e-75,93;UBERON:0001434,7.74e-69,100;UBERON:0002204,3.44e-36,167;UBERON:0003081,8.84e-35,203;UBERON:0000926,1.25e-17,315;UBERON:0004120,1.25e-17,315;UBERON:0006603,1.25e-17,315;UBERON:0002384,3.91e-17,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,4.33485145285013,0,0,0,0,0,0,9.41792194504192,10.0272223735071,5.20826089718044,1.11957737119962,1.6194683300949,0,4.65274364094607,6.80176698639857,5.09426528494414,16.0376035464922,9.86802931252382,14.5561994320699,8.05538698502021,5.37937483711111,6.3850202069918,16.8925383560943,26.4648720269369,25.7310324529249,12.2357520702693,7.36846605156184,6.29225756446237,15.610278510916,11.2325159476633,14.7047538933779,2.96866170168044,3.59034583718937,5.11469700639233,8.41606792022894,13.0498601678962,19.3074897188628,6.28121663141858,2.08593167368081,6.29847649644838,4.23779651843358,10.6800514436394,9.17740923578565,2.74631872205524,5.10250319916104,3.56419697364239,1.57260083605093,1.65194582125657,1.6072558669708,1.14005097496499,2.98375015798635,3.47061892152804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,1.74129737299267,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,1.63802985597466,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.99602809578873,5.9832291840805,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,5.1771408196468,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,2.02979043692868,0.764637207142375,3.41788312304498,0.952927101831156,1.23408681925858,0.648473311192717,2.16012574895246,0.79312517629427,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0.522355239482415,0,0,0.580537987734511,0.292357268344742,0.574808199372465,0.193978032976839,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,8.51182150013745,0,0,0,0.0524545881349981,0.105600336519406,1.25501137532991,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0.471612915298998,0.414239055347196,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0.974301544196942,1.0629187225069,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,2.38875843943525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,4.33485145285013,0,0,0,0,0,0,9.41792194504192,10.0272223735071,5.20826089718044,1.11957737119962,1.6194683300949,0,4.65274364094607,6.80176698639857,5.09426528494414,16.0376035464922,9.86802931252382,14.5561994320699,8.05538698502021,5.37937483711111,6.3850202069918,16.8925383560943,26.4648720269369,25.7310324529249,12.2357520702693,7.36846605156184,6.29225756446237,15.610278510916,11.2325159476633,14.7047538933779,2.96866170168044,3.59034583718937,5.11469700639233,8.41606792022894,13.0498601678962,19.3074897188628,6.28121663141858,2.08593167368081,6.29847649644838,4.23779651843358,10.6800514436394,9.17740923578565,2.74631872205524,5.10250319916104,3.56419697364239,1.57260083605093,1.65194582125657,1.6072558669708,1.14005097496499,2.98375015798635,3.47061892152804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,1.74129737299267,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,1.63802985597466,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.99602809578873,5.9832291840805,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,5.1771408196468,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,2.02979043692868,0.764637207142375,3.41788312304498,0.952927101831156,1.23408681925858,0.648473311192717,2.16012574895246,0.79312517629427,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0.522355239482415,0,0,0.580537987734511,0.292357268344742,0.574808199372465,0.193978032976839,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,8.51182150013745,0,0,0,0.0524545881349981,0.105600336519406,1.25501137532991,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0.471612915298998,0.414239055347196,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0.974301544196942,1.0629187225069,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,2.38875843943525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:134823232..134823267,+ | |short_description=p@chr10:134823232..134823267,+ | ||
}} | }} |
Latest revision as of 11:49, 23 July 2015
Short description: | p@chr10:134823232..134823267, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134823232..134823267, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-94 | 76 |
bone element | 1.35e-86 | 82 |
hematopoietic system | 3.80e-86 | 98 |
blood island | 3.80e-86 | 98 |
skeletal element | 7.77e-78 | 90 |
hemolymphoid system | 5.41e-77 | 108 |
immune system | 6.18e-75 | 93 |
skeletal system | 7.74e-69 | 100 |
musculoskeletal system | 3.44e-36 | 167 |
lateral plate mesoderm | 8.84e-35 | 203 |
mesoderm | 1.25e-17 | 315 |
mesoderm-derived structure | 1.25e-17 | 315 |
presumptive mesoderm | 1.25e-17 | 315 |
connective tissue | 3.91e-17 | 371 |