FFCP PHASE1:Hg19::chr14:22554655..22554676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A0JD19 | |UniProt=A0JD19 | ||
|association_with_transcript=0bp_to_uc001wcz.1_5end | |association_with_transcript=0bp_to_uc001wcz.1_5end | ||
|cluster_id=chr14:22554655..22554676,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_uc001wcz.1_5end | |description=CAGE_peak_1_at_uc001wcz.1_5end | ||
|id=chr14:22554655..22554676,+ | |id=chr14:22554655..22554676,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.80e-33!18;CL:0000789!1.80e-33!18;CL:0002420!1.80e-33!18;CL:0002419!1.80e-33!18;CL:0000790!1.80e-33!18;CL:0000625!1.15e-23!11;CL:0000084!1.19e-22!25;CL:0000827!1.19e-22!25;CL:0000624!1.09e-13!6;CL:0000838!3.66e-12!52;CL:0000542!7.88e-12!53;CL:0000051!7.88e-12!53;CL:0000738!7.30e-10!140;CL:0002087!1.20e-09!119;CL:0000898!7.92e-08!3;CL:0000842!4.73e-07!3;CL:0000037!5.42e-07!172;CL:0000566!5.42e-07!172;CL:0000623!5.47e-07!3;CL:0000825!5.47e-07!3;CL:0002031!8.88e-07!124;CL:0002619!9.59e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.80e-33!18;CL:0000789!1.80e-33!18;CL:0002420!1.80e-33!18;CL:0002419!1.80e-33!18;CL:0000790!1.80e-33!18;CL:0000625!1.15e-23!11;CL:0000084!1.19e-22!25;CL:0000827!1.19e-22!25;CL:0000624!1.09e-13!6;CL:0000838!3.66e-12!52;CL:0000542!7.88e-12!53;CL:0000051!7.88e-12!53;CL:0000738!7.30e-10!140;CL:0002087!1.20e-09!119;CL:0000898!7.92e-08!3;CL:0000842!4.73e-07!3;CL:0000037!5.42e-07!172;CL:0000566!5.42e-07!172;CL:0000623!5.47e-07!3;CL:0000825!5.47e-07!3;CL:0002031!8.88e-07!124;CL:0002619!9.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.09e-46;18!CL:0000789;7.09e-46;18!CL:0002419;7.09e-46;18!CL:0000084;7.15e-32;25!CL:0000625;4.45e-30;11!CL:0000624;2.15e-20;6!CL:0000898;2.56e-11;3!CL:0000226;4.70e-10;3!CL:0000842;4.70e-10;3!CL:0000623;6.00e-10;3!CL:0000542;2.97e-09;53!CL:0000815;3.88e-08;2!CL:0000792;3.88e-08;2!CL:0002677;3.88e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.78e-46,18;CL:0000789,7.78e-46,18;CL:0002420,7.78e-46,18;CL:0002419,7.78e-46,18;CL:0000790,7.78e-46,18;CL:0000084,7.64e-32,25;CL:0000827,7.64e-32,25;CL:0000625,4.60e-30,11;CL:0000624,2.30e-20,6;CL:0000838,5.91e-19,52;CL:0000542,1.66e-18,53;CL:0000051,1.66e-18,53;CL:0000898,2.80e-11,3;CL:0002087,1.29e-10,115;CL:0000226,4.41e-10,3;CL:0000842,4.41e-10,3;CL:0000623,5.53e-10,3;CL:0000825,5.53e-10,3;CL:0000738,5.68e-10,136;CL:0000815,4.16e-08,2;CL:0000792,4.16e-08,2;CL:0002677,4.16e-08,2;CL:0002031,3.48e-07,120;CL:0000037,5.64e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;7.09e-46;18!CL:0000051;2.97e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.07e-18!15;UBERON:0000179!1.07e-18!15;UBERON:0000463!1.07e-18!15;UBERON:0007023!4.97e-10!115;UBERON:0004177!7.38e-08!7;UBERON:0002193!4.05e-07!112;UBERON:0002390!6.38e-07!102;UBERON:0003061!6.38e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!1.07e-18!15;UBERON:0000179!1.07e-18!15;UBERON:0000463!1.07e-18!15;UBERON:0007023!4.97e-10!115;UBERON:0004177!7.38e-08!7;UBERON:0002193!4.05e-07!112;UBERON:0002390!6.38e-07!102;UBERON:0003061!6.38e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.11e-29;15!UBERON:0000179;9.11e-29;15!UBERON:0000463;9.11e-29;15!UBERON:0002390;6.28e-18;32!UBERON:0002193;6.16e-11;42!UBERON:0002370;4.46e-08;2!UBERON:0005058;4.46e-08;2!UBERON:0009113;4.46e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.66e-29,15;UBERON:0000179,8.66e-29,15;UBERON:0000463,8.66e-29,15;UBERON:0002370,1.51e-08,4;UBERON:0005058,1.51e-08,4;UBERON:0009113,1.51e-08,4;UBERON:0003295,1.51e-08,4;UBERON:0005562,1.51e-08,4;UBERON:0004177,5.70e-08,7;UBERON:0005057,5.70e-08,7 | |||
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| ||
|short_description=p1@uc001wcz.1 | |short_description=p1@uc001wcz.1 | ||
}} | }} |
Latest revision as of 04:45, 19 September 2015
Short description: | p1@uc001wcz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wcz.1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc001wcz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.78e-46 | 18 |
alpha-beta T cell | 7.78e-46 | 18 |
immature T cell | 7.78e-46 | 18 |
mature T cell | 7.78e-46 | 18 |
immature alpha-beta T cell | 7.78e-46 | 18 |
T cell | 7.64e-32 | 25 |
pro-T cell | 7.64e-32 | 25 |
CD8-positive, alpha-beta T cell | 4.60e-30 | 11 |
CD4-positive, alpha-beta T cell | 2.30e-20 | 6 |
lymphoid lineage restricted progenitor cell | 5.91e-19 | 52 |
lymphocyte | 1.66e-18 | 53 |
common lymphoid progenitor | 1.66e-18 | 53 |
naive T cell | 2.80e-11 | 3 |
nongranular leukocyte | 1.29e-10 | 115 |
single nucleate cell | 4.41e-10 | 3 |
mononuclear cell | 4.41e-10 | 3 |
natural killer cell | 5.53e-10 | 3 |
pro-NK cell | 5.53e-10 | 3 |
leukocyte | 5.68e-10 | 136 |
regulatory T cell | 4.16e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.16e-08 | 2 |
naive regulatory T cell | 4.16e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 3.48e-07 | 120 |
hematopoietic stem cell | 5.64e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 8.66e-29 | 15 |
haemolymphatic fluid | 8.66e-29 | 15 |
organism substance | 8.66e-29 | 15 |
thymus | 1.51e-08 | 4 |
hemolymphoid system gland | 1.51e-08 | 4 |
thymic region | 1.51e-08 | 4 |
pharyngeal gland | 1.51e-08 | 4 |
thymus primordium | 1.51e-08 | 4 |
hemopoietic organ | 5.70e-08 | 7 |
immune organ | 5.70e-08 | 7 |