FFCP PHASE1:Hg19::chr15:45930121..45930131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45930121..45930131,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:45930121..45930131,+ | |description=CAGE_peak_at_chr15:45930121..45930131,+ | ||
|id=chr15:45930121..45930131,+ | |id=chr15:45930121..45930131,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.16e-101!42;CL:0000860!1.86e-94!45;CL:0002194!5.54e-69!63;CL:0000576!5.54e-69!63;CL:0000040!5.54e-69!63;CL:0000559!5.54e-69!63;CL:0002009!1.08e-66!65;CL:0000839!1.57e-61!70;CL:0000557!1.38e-60!71;CL:0000766!3.56e-60!76;CL:0002087!3.42e-41!119;CL:0000763!7.49e-39!112;CL:0000049!7.49e-39!112;CL:0000738!2.32e-36!140;CL:0002031!2.08e-34!124;CL:0000037!2.56e-28!172;CL:0000566!2.56e-28!172;CL:0000988!2.22e-26!182;CL:0002032!4.57e-26!165;CL:0000837!4.57e-26!165;CL:0000134!1.24e-13!358;CL:0002320!3.16e-13!365;CL:0000219!8.62e-12!390;CL:0000048!4.53e-10!430;CL:0000723!7.95e-10!436;CL:0000034!1.65e-09!444;CL:0000842!4.89e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.16e-101!42;CL:0000860!1.86e-94!45;CL:0002194!5.54e-69!63;CL:0000576!5.54e-69!63;CL:0000040!5.54e-69!63;CL:0000559!5.54e-69!63;CL:0002009!1.08e-66!65;CL:0000839!1.57e-61!70;CL:0000557!1.38e-60!71;CL:0000766!3.56e-60!76;CL:0002087!3.42e-41!119;CL:0000763!7.49e-39!112;CL:0000049!7.49e-39!112;CL:0000738!2.32e-36!140;CL:0002031!2.08e-34!124;CL:0000037!2.56e-28!172;CL:0000566!2.56e-28!172;CL:0000988!2.22e-26!182;CL:0002032!4.57e-26!165;CL:0000837!4.57e-26!165;CL:0000134!1.24e-13!358;CL:0002320!3.16e-13!365;CL:0000219!8.62e-12!390;CL:0000048!4.53e-10!430;CL:0000723!7.95e-10!436;CL:0000034!1.65e-09!444;CL:0000842!4.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-100;33!CL:0002057;1.36e-100;33!CL:0000473;7.88e-69;39!CL:0000234;7.88e-69;39!CL:0000576;1.70e-49;48!CL:0000766;3.34e-27;69!CL:0002087;6.17e-15;104!CL:0000763;1.59e-14;100!CL:0000738;3.07e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-92,42;CL:0002057,1.23e-92,42;CL:0000473,1.15e-80,48;CL:0000234,1.15e-80,48;CL:0002194,6.69e-64,59;CL:0000576,6.69e-64,59;CL:0000040,6.69e-64,59;CL:0000559,6.69e-64,59;CL:0002009,9.76e-62,61;CL:0000766,6.46e-57,72;CL:0000839,6.86e-57,66;CL:0000557,5.25e-56,67;CL:0000763,5.00e-37,108;CL:0000049,5.00e-37,108;CL:0002087,1.81e-31,115;CL:0002031,4.99e-30,120;CL:0000738,9.10e-29,136;CL:0002032,8.52e-24,161;CL:0000837,8.52e-24,161;CL:0000037,1.15e-22,168;CL:0000988,2.41e-21,177;CL:0000134,7.00e-09,354;CL:0002320,1.23e-08,361;CL:0000219,9.03e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-62;42!CL:0000049;1.39e-09;108!UBERON:0005425;2.36e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.05e-53!80;UBERON:0001474!5.35e-49!86;UBERON:0002390!4.36e-46!102;UBERON:0003061!4.36e-46!102;UBERON:0002193!2.12e-41!112;UBERON:0004765!8.15e-41!101;UBERON:0001434!8.15e-41!101;UBERON:0002405!4.39e-35!115;UBERON:0002204!3.76e-22!167;UBERON:0003081!4.36e-21!216;UBERON:0002384!1.14e-12!375;UBERON:0000926!4.28e-07!448;UBERON:0004120!4.28e-07!448;UBERON:0006603!4.28e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!4.05e-53!80;UBERON:0001474!5.35e-49!86;UBERON:0002390!4.36e-46!102;UBERON:0003061!4.36e-46!102;UBERON:0002193!2.12e-41!112;UBERON:0004765!8.15e-41!101;UBERON:0001434!8.15e-41!101;UBERON:0002405!4.39e-35!115;UBERON:0002204!3.76e-22!167;UBERON:0003081!4.36e-21!216;UBERON:0002384!1.14e-12!375;UBERON:0000926!4.28e-07!448;UBERON:0004120!4.28e-07!448;UBERON:0006603!4.28e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.36e-09;1!UBERON:0001785;2.36e-09;1!UBERON:0002464;2.36e-09;1!UBERON:0004904;2.36e-09;1!UBERON:0001021;2.36e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.41e-49,76;UBERON:0001474,2.68e-45,82;UBERON:0004765,5.00e-41,90;UBERON:0002405,1.30e-39,93;UBERON:0002390,1.91e-37,98;UBERON:0003061,1.91e-37,98;UBERON:0001434,1.23e-36,100;UBERON:0002193,1.05e-33,108;UBERON:0002204,1.14e-20,167;UBERON:0003081,2.10e-16,203;UBERON:0000941,2.26e-09,1;UBERON:0001785,2.26e-09,1;UBERON:0002464,2.26e-09,1;UBERON:0004904,2.26e-09,1;UBERON:0001021,2.26e-09,1;UBERON:0003902,2.26e-09,1;UBERON:0005425,2.26e-09,1;UBERON:0000926,2.64e-09,315;UBERON:0004120,2.64e-09,315;UBERON:0006603,2.64e-09,315;UBERON:0002384,2.66e-08,371 | |||
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|short_description=p@chr15:45930121..45930131,+ | |short_description=p@chr15:45930121..45930131,+ | ||
}} | }} |
Latest revision as of 02:05, 25 July 2015
Short description: | p@chr15:45930121..45930131, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45930121..45930131, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-92 | 42 |
defensive cell | 1.15e-80 | 48 |
phagocyte | 1.15e-80 | 48 |
monopoietic cell | 6.69e-64 | 59 |
monocyte | 6.69e-64 | 59 |
monoblast | 6.69e-64 | 59 |
promonocyte | 6.69e-64 | 59 |
macrophage dendritic cell progenitor | 9.76e-62 | 61 |
myeloid leukocyte | 6.46e-57 | 72 |
myeloid lineage restricted progenitor cell | 6.86e-57 | 66 |
granulocyte monocyte progenitor cell | 5.25e-56 | 67 |
myeloid cell | 5.00e-37 | 108 |
common myeloid progenitor | 5.00e-37 | 108 |
nongranular leukocyte | 1.81e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 4.99e-30 | 120 |
leukocyte | 9.10e-29 | 136 |
hematopoietic oligopotent progenitor cell | 8.52e-24 | 161 |
hematopoietic multipotent progenitor cell | 8.52e-24 | 161 |
hematopoietic stem cell | 1.15e-22 | 168 |
hematopoietic cell | 2.41e-21 | 177 |
mesenchymal cell | 7.00e-09 | 354 |
connective tissue cell | 1.23e-08 | 361 |
motile cell | 9.03e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.41e-49 | 76 |
bone element | 2.68e-45 | 82 |
skeletal element | 5.00e-41 | 90 |
immune system | 1.30e-39 | 93 |
hematopoietic system | 1.91e-37 | 98 |
blood island | 1.91e-37 | 98 |
skeletal system | 1.23e-36 | 100 |
hemolymphoid system | 1.05e-33 | 108 |
musculoskeletal system | 1.14e-20 | 167 |
lateral plate mesoderm | 2.10e-16 | 203 |
cranial nerve II | 2.26e-09 | 1 |
cranial nerve | 2.26e-09 | 1 |
nerve trunk | 2.26e-09 | 1 |
nerve connecting eye with brain | 2.26e-09 | 1 |
nerve | 2.26e-09 | 1 |
retinal neural layer | 2.26e-09 | 1 |
presumptive neural retina | 2.26e-09 | 1 |
mesoderm | 2.64e-09 | 315 |
mesoderm-derived structure | 2.64e-09 | 315 |
presumptive mesoderm | 2.64e-09 | 315 |
connective tissue | 2.66e-08 | 371 |