FFCP PHASE1:Hg19::chr17:38497715..38497734,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5914 | |EntrezGene=5914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9864 | |HGNC=9864 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUX3 | |UniProt=B3KUX3 | ||
|association_with_transcript=75bp_to_AK098172_5end | |association_with_transcript=75bp_to_AK098172_5end | ||
|cluster_id=chr17:38497715..38497734,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_8_at_RARA_5end | |description=CAGE_peak_8_at_RARA_5end | ||
|id=chr17:38497715..38497734,+ | |id=chr17:38497715..38497734,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.04e-46!42;CL:0000860!2.10e-42!45;CL:0000738!2.70e-39!140;CL:0000766!8.09e-37!76;CL:0000557!2.55e-31!71;CL:0000037!2.80e-29!172;CL:0000566!2.80e-29!172;CL:0002031!1.20e-28!124;CL:0002009!8.91e-28!65;CL:0002087!1.64e-27!119;CL:0000839!1.74e-27!70;CL:0002194!3.88e-26!63;CL:0000576!3.88e-26!63;CL:0000040!3.88e-26!63;CL:0000559!3.88e-26!63;CL:0000988!4.66e-26!182;CL:0002032!1.56e-25!165;CL:0000837!1.56e-25!165;CL:0000763!3.35e-23!112;CL:0000049!3.35e-23!112;CL:0000094!2.66e-10!8;CL:0002393!5.11e-10!9;CL:0002397!5.11e-10!9;CL:0000134!6.78e-08!358;CL:0000624!8.65e-08!6;CL:0002320!2.89e-07!365;CL:0000081!7.36e-07!11 | |ontology_enrichment_celltype=CL:0002057!1.04e-46!42;CL:0000860!2.10e-42!45;CL:0000738!2.70e-39!140;CL:0000766!8.09e-37!76;CL:0000557!2.55e-31!71;CL:0000037!2.80e-29!172;CL:0000566!2.80e-29!172;CL:0002031!1.20e-28!124;CL:0002009!8.91e-28!65;CL:0002087!1.64e-27!119;CL:0000839!1.74e-27!70;CL:0002194!3.88e-26!63;CL:0000576!3.88e-26!63;CL:0000040!3.88e-26!63;CL:0000559!3.88e-26!63;CL:0000988!4.66e-26!182;CL:0002032!1.56e-25!165;CL:0000837!1.56e-25!165;CL:0000763!3.35e-23!112;CL:0000049!3.35e-23!112;CL:0000094!2.66e-10!8;CL:0002393!5.11e-10!9;CL:0002397!5.11e-10!9;CL:0000134!6.78e-08!358;CL:0000624!8.65e-08!6;CL:0002320!2.89e-07!365;CL:0000081!7.36e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.01e-61;33!CL:0002057;7.01e-61;33!CL:0000473;7.94e-42;39!CL:0000234;7.94e-42;39!CL:0000576;4.04e-41;48!CL:0000766;4.41e-33;69!CL:0002087;2.75e-19;104!CL:0000094;3.63e-17;8!CL:0000738;3.88e-15;136!CL:0000763;4.91e-15;100!CL:0000624;1.03e-12;6!CL:0000081;5.04e-12;11!CL:0000988;3.17e-10;177!CL:0002393;5.53e-09;6!CL:0002397;5.53e-09;6!CL:0000791;3.16e-08;18!CL:0000789;3.16e-08;18!CL:0002419;3.16e-08;18!CL:0000775;1.12e-07;3!CL:0000219;1.32e-07;193!CL:0000623;1.88e-07;3!CL:0000898;2.68e-07;3!CL:0000226;3.93e-07;3!CL:0000842;3.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.07e-79,42;CL:0002057,3.07e-79,42;CL:0000738,4.89e-71,136;CL:0000766,8.16e-70,72;CL:0000473,1.09e-67,48;CL:0000234,1.09e-67,48;CL:0000557,1.60e-59,67;CL:0000037,3.27e-57,168;CL:0002009,1.23e-54,61;CL:0002031,2.68e-54,120;CL:0000988,2.71e-53,177;CL:0002087,3.24e-53,115;CL:0000839,8.51e-53,66;CL:0002194,1.51e-51,59;CL:0000576,1.51e-51,59;CL:0000040,1.51e-51,59;CL:0000559,1.51e-51,59;CL:0002032,2.12e-51,161;CL:0000837,2.12e-51,161;CL:0000763,4.23e-47,108;CL:0000049,4.23e-47,108;CL:0000134,5.46e-19,354;CL:0002320,3.10e-18,361;CL:0000094,3.17e-17,8;CL:0000219,1.38e-15,386;CL:0002393,1.70e-13,9;CL:0002397,1.70e-13,9;CL:0000624,9.94e-13,6;CL:0000034,1.23e-12,441;CL:0000048,2.24e-12,427;CL:0000081,4.57e-12,11;CL:0000723,6.18e-12,433;CL:0000791,3.21e-08,18;CL:0000789,3.21e-08,18;CL:0002420,3.21e-08,18;CL:0002419,3.21e-08,18;CL:0000790,3.21e-08,18;CL:0000775,9.62e-08,3;CL:0000623,1.94e-07,3;CL:0000825,1.94e-07,3;CL:0000898,2.36e-07,3;CL:0000226,3.85e-07,3;CL:0000842,3.85e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.47e-57;42!CL:0000049;1.48e-13;108!CL:0000790;3.16e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.47e-36!102;UBERON:0003061!2.47e-36!102;UBERON:0002193!5.41e-32!112;UBERON:0002371!3.60e-28!80;UBERON:0001474!6.98e-25!86;UBERON:0002405!7.25e-22!115;UBERON:0004765!1.77e-18!101;UBERON:0001434!1.77e-18!101;UBERON:0003081!1.02e-13!216;UBERON:0002204!4.04e-09!167;UBERON:0000178!3.22e-07!15;UBERON:0000179!3.22e-07!15;UBERON:0000463!3.22e-07!15;UBERON:0002384!9.39e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.47e-36!102;UBERON:0003061!2.47e-36!102;UBERON:0002193!5.41e-32!112;UBERON:0002371!3.60e-28!80;UBERON:0001474!6.98e-25!86;UBERON:0002405!7.25e-22!115;UBERON:0004765!1.77e-18!101;UBERON:0001434!1.77e-18!101;UBERON:0003081!1.02e-13!216;UBERON:0002204!4.04e-09!167;UBERON:0000178!3.22e-07!15;UBERON:0000179!3.22e-07!15;UBERON:0000463!3.22e-07!15;UBERON:0002384!9.39e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.75e-07;15!UBERON:0000179;3.75e-07;15!UBERON:0000463;3.75e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-56,98;UBERON:0003061,1.51e-56,98;UBERON:0002371,3.90e-53,76;UBERON:0002193,7.92e-50,108;UBERON:0001474,3.10e-48,82;UBERON:0002405,4.89e-43,93;UBERON:0004765,1.03e-42,90;UBERON:0001434,4.65e-37,100;UBERON:0003081,5.73e-21,203;UBERON:0002204,1.07e-17,167;UBERON:0002384,3.30e-17,371;UBERON:0000926,2.59e-09,315;UBERON:0004120,2.59e-09,315;UBERON:0006603,2.59e-09,315;UBERON:0000178,3.53e-07,15;UBERON:0000179,3.53e-07,15;UBERON:0000463,3.53e-07,15 | |||
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| ||
|short_description=p8@RARA | |short_description=p8@RARA | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p8@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RARA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 75bp_to_AK098172_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | B3KUX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-56 | 98 |
blood island | 1.51e-56 | 98 |
bone marrow | 3.90e-53 | 76 |
hemolymphoid system | 7.92e-50 | 108 |
bone element | 3.10e-48 | 82 |
immune system | 4.89e-43 | 93 |
skeletal element | 1.03e-42 | 90 |
skeletal system | 4.65e-37 | 100 |
lateral plate mesoderm | 5.73e-21 | 203 |
musculoskeletal system | 1.07e-17 | 167 |
connective tissue | 3.30e-17 | 371 |
mesoderm | 2.59e-09 | 315 |
mesoderm-derived structure | 2.59e-09 | 315 |
presumptive mesoderm | 2.59e-09 | 315 |
blood | 3.53e-07 | 15 |
haemolymphatic fluid | 3.53e-07 | 15 |
organism substance | 3.53e-07 | 15 |