FFCP PHASE1:Hg19::chr18:5296001..5296045,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:5296001..5296045,-
|short_description=p1@ZFP161
|description=CAGE_peak_1_at_ZFP161_5end
|association_with_transcript=0bp_to_ENST00000357006,ENST0000040014...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7541 | |EntrezGene=7541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12860 | |HGNC=12860 | ||
|TSSclassifier=strong | |||
|UniProt=O43829 | |UniProt=O43829 | ||
|association_with_transcript=0bp_to_ENST00000357006,ENST00000400143,uc002kmr.2,uc010dkp.2_5end | |||
|cluster_id=chr18:5296001..5296045,- | |||
|description=CAGE_peak_1_at_ZFP161_5end | |||
|id=chr18:5296001..5296045,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.73e-11!94;UBERON:0001016!2.73e-11!94;UBERON:0005743!1.12e-10!86;UBERON:0002791!4.21e-10!33;UBERON:0001893!4.32e-10!34;UBERON:0001017!6.26e-10!82;UBERON:0001049!1.26e-09!57;UBERON:0005068!1.26e-09!57;UBERON:0006241!1.26e-09!57;UBERON:0007135!1.26e-09!57;UBERON:0003080!1.56e-09!42;UBERON:0001869!2.54e-09!32;UBERON:0002780!3.29e-09!41;UBERON:0001890!3.29e-09!41;UBERON:0006240!3.29e-09!41;UBERON:0002020!4.31e-09!34;UBERON:0003528!4.31e-09!34;UBERON:0000956!7.77e-09!25;UBERON:0000203!7.77e-09!25;UBERON:0003056!2.17e-08!61;UBERON:0002619!5.69e-08!22;UBERON:0000955!1.63e-07!69;UBERON:0006238!1.63e-07!69;UBERON:0002616!2.94e-07!59;UBERON:0004121!4.77e-07!169;UBERON:0001950!6.00e-07!20;UBERON:0000924!6.57e-07!173;UBERON:0006601!6.57e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.23e-09;25!UBERON:0000203;2.23e-09;25!UBERON:0002791;6.76e-09;32!UBERON:0001893;7.40e-09;34!UBERON:0001869;1.17e-08;32!UBERON:0002619;1.38e-08;22!UBERON:0003528;2.64e-08;34!UBERON:0002020;2.64e-08;34!UBERON:0001950;1.75e-07;20!UBERON:0002780;4.80e-07;41!UBERON:0001890;4.80e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.06e-10,89;UBERON:0001893,3.78e-10,34;UBERON:0002791,9.54e-10,32;UBERON:0001017,1.19e-09,81;UBERON:0001869,2.23e-09,32;UBERON:0001049,2.41e-09,56;UBERON:0005068,2.41e-09,56;UBERON:0006241,2.41e-09,56;UBERON:0007135,2.41e-09,56;UBERON:0002780,3.09e-09,41;UBERON:0001890,3.09e-09,41;UBERON:0003080,3.09e-09,41;UBERON:0006240,3.09e-09,41;UBERON:0003528,3.80e-09,34;UBERON:0002020,3.80e-09,34;UBERON:0000956,6.75e-09,25;UBERON:0000203,6.75e-09,25;UBERON:0000073,9.49e-09,53;UBERON:0002616,9.49e-09,53;UBERON:0003056,1.49e-08,61;UBERON:0002619,4.96e-08,22;UBERON:0003075,1.29e-07,82;UBERON:0007284,1.29e-07,82;UBERON:0002346,2.63e-07,86;UBERON:0000955,2.99e-07,68;UBERON:0006238,2.99e-07,68;UBERON:0001950,5.27e-07,20;UBERON:0004121,6.34e-07,171;UBERON:0000924,6.34e-07,171;UBERON:0006601,6.34e-07,171 | |||
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| ||
|short_description=p1@ZFP161 | |||
}} | }} |
Latest revision as of 20:30, 19 September 2015
Short description: | p1@ZFP161 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZFP161_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357006, ENST00000400143, uc002kmr.2, uc010dkp.2_5end |
EntrezGene: | ZFP161 |
HGNC: | 12860 |
UniProt: | O43829 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.06e-10 | 89 |
telencephalon | 3.78e-10 | 34 |
regional part of telencephalon | 9.54e-10 | 32 |
central nervous system | 1.19e-09 | 81 |
cerebral hemisphere | 2.23e-09 | 32 |
neural tube | 2.41e-09 | 56 |
neural rod | 2.41e-09 | 56 |
future spinal cord | 2.41e-09 | 56 |
neural keel | 2.41e-09 | 56 |
regional part of forebrain | 3.09e-09 | 41 |
forebrain | 3.09e-09 | 41 |
anterior neural tube | 3.09e-09 | 41 |
future forebrain | 3.09e-09 | 41 |
brain grey matter | 3.80e-09 | 34 |
gray matter | 3.80e-09 | 34 |
cerebral cortex | 6.75e-09 | 25 |
pallium | 6.75e-09 | 25 |
regional part of nervous system | 9.49e-09 | 53 |
regional part of brain | 9.49e-09 | 53 |
pre-chordal neural plate | 1.49e-08 | 61 |
regional part of cerebral cortex | 4.96e-08 | 22 |
neural plate | 1.29e-07 | 82 |
presumptive neural plate | 1.29e-07 | 82 |
neurectoderm | 2.63e-07 | 86 |
brain | 2.99e-07 | 68 |
future brain | 2.99e-07 | 68 |
neocortex | 5.27e-07 | 20 |
ectoderm-derived structure | 6.34e-07 | 171 |
ectoderm | 6.34e-07 | 171 |
presumptive ectoderm | 6.34e-07 | 171 |