FFCP PHASE1:Hg19::chr1:207206095..207206121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79098 | |EntrezGene=79098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28667 | |HGNC=28667 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BW04 | |UniProt=Q9BW04 | ||
|association_with_transcript=0bp_to_ENST00000461135,NM_001083924,NM_023938,uc001hfd.2,uc009xcb.1_5end | |association_with_transcript=0bp_to_ENST00000461135,NM_001083924,NM_023938,uc001hfd.2,uc009xcb.1_5end | ||
|cluster_id=chr1:207206095..207206121,- | |||
|coexpression_cluster_id=C1844 | |coexpression_cluster_id=C1844 | ||
|description=CAGE_peak_2_at_C1orf116_5end | |description=CAGE_peak_2_at_C1orf116_5end | ||
|id=chr1:207206095..207206121,- | |id=chr1:207206095..207206121,- | ||
|ontology_enrichment_celltype=CL:0000066!4.92e-28!254;CL:0002076!2.66e-26!43;CL:0000223!2.30e-20!59;CL:0002251!8.50e-13!21;CL:0002368!3.95e-12!13;CL:0002202!2.56e-08!9;CL:0002632!2.56e-08!9;CL:0002159!6.40e-08!13;CL:1000507!4.15e-07!12;CL:1000494!4.15e-07!12 | |ontology_enrichment_celltype=CL:0000066!4.92e-28!254;CL:0002076!2.66e-26!43;CL:0000223!2.30e-20!59;CL:0002251!8.50e-13!21;CL:0002368!3.95e-12!13;CL:0002202!2.56e-08!9;CL:0002632!2.56e-08!9;CL:0002159!6.40e-08!13;CL:1000507!4.15e-07!12;CL:1000494!4.15e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.02e-24;42!CL:0002368;3.56e-16;13!CL:0002251;3.68e-15;20!CL:0002202;5.51e-11;9!CL:0002632;5.51e-11;9!CL:1000507;6.67e-10;10!CL:1000494;6.67e-10;10!CL:0002159;8.35e-10;14!CL:1000497;5.63e-08;17!CL:0002518;5.63e-08;17!CL:1000449;1.12e-07;15!CL:0000622;2.70e-07;5!CL:0000244;3.19e-07;4!CL:0000731;3.19e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.72e-32,42;CL:0000066,1.46e-30,253;CL:0000223,6.60e-23,58;CL:0002368,3.25e-16,13;CL:0002251,3.52e-15,20;CL:0002202,5.24e-11,9;CL:0002632,5.24e-11,9;CL:1000507,6.04e-10,10;CL:1000494,6.04e-10,10;CL:0002159,8.16e-10,14;CL:1000497,5.33e-08,17;CL:0002518,5.33e-08,17;CL:1000449,1.04e-07,15;CL:0000622,3.12e-07,5;CL:0000244,3.34e-07,4;CL:0000731,3.34e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;2.74e-12;58!UBERON:0006595;2.92e-07;86 | |||
|ontology_enrichment_disease=DOID:305!6.06e-16!106;DOID:1749!1.32e-11!14;DOID:0050687!1.09e-09!143 | |ontology_enrichment_disease=DOID:305!6.06e-16!106;DOID:1749!1.32e-11!14;DOID:0050687!1.09e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.66e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.75e-15,14;DOID:305,9.11e-11,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;2.71e-12;30!UBERON:0001008;2.71e-12;30!UBERON:0005178;6.48e-12;34!UBERON:0002224;6.48e-12;34!UBERON:0000161;1.01e-11;19!UBERON:0000166;1.01e-11;19!UBERON:0005181;1.41e-11;35!UBERON:0000165;1.30e-10;28!UBERON:0004211;6.67e-10;10!UBERON:0009773;6.67e-10;10!UBERON:0001231;6.67e-10;10!UBERON:0004810;6.67e-10;10!UBERON:0002048;1.06e-09;22!UBERON:0000117;1.06e-09;22!UBERON:0000171;1.06e-09;22!UBERON:0000170;1.06e-09;22!UBERON:0004807;1.11e-09;22!UBERON:0001041;1.14e-09;14!UBERON:0005911;1.59e-09;36!UBERON:0004921;4.21e-09;33!UBERON:0001004;8.15e-09;65!UBERON:0007196;1.26e-08;15!UBERON:0001558;1.26e-08;15!UBERON:0000344;1.49e-08;20!UBERON:0001555;2.04e-08;54!UBERON:0000365;4.84e-08;5!UBERON:0000065;9.47e-08;44!UBERON:0006555;1.12e-07;15!UBERON:0004819;1.12e-07;15!UBERON:0001285;1.12e-07;15!UBERON:0007684;1.12e-07;15!UBERON:0002294;2.14e-07;7!UBERON:0001173;2.14e-07;7!UBERON:0000486;2.19e-07;12!UBERON:0001044;2.89e-07;6!UBERON:0003293;2.89e-07;6!UBERON:0003294;2.89e-07;6!UBERON:0010047;2.89e-07;6!UBERON:0003408;2.89e-07;6!UBERON:0000167;2.89e-07;6!UBERON:0000489;5.41e-07;29!UBERON:0002113;7.32e-07;24!UBERON:0011143;7.32e-07;24 | |||
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| ||
|short_description=p2@C1orf116 | |short_description=p2@C1orf116 | ||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p2@C1orf116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf116_5end |
Coexpression cluster: | C1844_squamous_epidermoid_bronchioalveolar_Corneal_Alveolar_Esophageal_Urothelial |
Association with transcript: | 0bp_to_ENST00000461135, NM_001083924, NM_023938, uc001hfd.2, uc009xcb.1_5end |
EntrezGene: | C1orf116 |
HGNC: | 28667 |
UniProt: | Q9BW04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.72e-32 | 42 |
epithelial cell | 1.46e-30 | 253 |
endodermal cell | 6.60e-23 | 58 |
respiratory epithelial cell | 3.25e-16 | 13 |
epithelial cell of alimentary canal | 3.52e-15 | 20 |
epithelial cell of tracheobronchial tree | 5.24e-11 | 9 |
epithelial cell of lower respiratory tract | 5.24e-11 | 9 |
kidney tubule cell | 6.04e-10 | 10 |
nephron tubule epithelial cell | 6.04e-10 | 10 |
general ecto-epithelial cell | 8.16e-10 | 14 |
kidney cell | 5.33e-08 | 17 |
kidney epithelial cell | 5.33e-08 | 17 |
epithelial cell of nephron | 1.04e-07 | 15 |
acinar cell | 3.12e-07 | 5 |
transitional epithelial cell | 3.34e-07 | 4 |
urothelial cell | 3.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.75e-15 | 14 |
carcinoma | 9.11e-11 | 106 |