FFCP PHASE1:Hg19::chr19:13961988..13962001,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:13961988..13962001,-
|short_description=p@chr19:13961988..13962001,-
|description=CAGE_peak_at_chr19:13961988..13962001,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:13961988..13962001,- | |||
|coexpression_cluster_id=C2360 | |||
|description=CAGE_peak_at_chr19:13961988..13962001,- | |||
|id=chr19:13961988..13962001,- | |||
|ontology_enrichment_celltype=CL:0002057!1.54e-52!42;CL:0000860!2.31e-52!45;CL:0000766!7.22e-45!76;CL:0000557!1.04e-40!71;CL:0002009!1.56e-37!65;CL:0000839!9.99e-36!70;CL:0002194!2.86e-35!63;CL:0000576!2.86e-35!63;CL:0000040!2.86e-35!63;CL:0000559!2.86e-35!63;CL:0000738!2.22e-32!140;CL:0000763!5.10e-28!112;CL:0000049!5.10e-28!112;CL:0000037!5.44e-24!172;CL:0000566!5.44e-24!172;CL:0002031!1.78e-23!124;CL:0002087!1.14e-22!119;CL:0000988!3.39e-22!182;CL:0002032!4.75e-20!165;CL:0000837!4.75e-20!165;CL:0000134!2.77e-13!358;CL:0002320!5.42e-13!365;CL:0000063!4.96e-12!578;CL:0002393!3.93e-11!9;CL:0002397!3.93e-11!9;CL:0000219!4.25e-11!390;CL:0000094!5.57e-09!8;CL:0000034!8.03e-08!444;CL:0000012!1.10e-07!682;CL:0000048!1.13e-07!430;CL:0000081!1.31e-07!11;CL:0000723!1.52e-07!436;CL:0000548!7.13e-07!679;CL:0000004!7.13e-07!679;CL:0000255!7.13e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.50e-63;33!CL:0002057;7.50e-63;33!CL:0000576;1.27e-43;48!CL:0000473;6.34e-43;39!CL:0000234;6.34e-43;39!CL:0000766;5.81e-32;69!CL:0000763;1.45e-15;100!CL:0000094;2.22e-15;8!CL:0002393;2.83e-14;6!CL:0002397;2.83e-14;6!CL:0000738;1.94e-12;136!CL:0002087;5.02e-12;104!CL:0000767;8.17e-12;3!CL:0000081;5.51e-11;11!CL:0000623;4.79e-10;3!CL:0000771;9.82e-08;2!CL:0001014;1.68e-07;2!CL:0001016;1.68e-07;2!CL:0000219;2.66e-07;193!CL:0000097;5.74e-07;5!CL:0000988;7.44e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-76,42;CL:0002057,3.92e-76,42;CL:0000766,9.40e-74,72;CL:0000557,2.26e-67,67;CL:0000473,1.53e-65,48;CL:0000234,1.53e-65,48;CL:0002009,5.64e-59,61;CL:0000839,9.02e-58,66;CL:0002194,4.74e-54,59;CL:0000576,4.74e-54,59;CL:0000040,4.74e-54,59;CL:0000559,4.74e-54,59;CL:0000763,1.40e-53,108;CL:0000049,1.40e-53,108;CL:0000738,1.82e-51,136;CL:0000037,2.22e-43,168;CL:0000988,1.36e-40,177;CL:0002032,7.64e-38,161;CL:0000837,7.64e-38,161;CL:0002031,1.55e-37,120;CL:0002087,5.32e-33,115;CL:0000134,3.85e-18,354;CL:0002320,1.49e-17,361;CL:0000219,1.76e-15,386;CL:0000094,2.17e-15,8;CL:0000034,8.19e-14,441;CL:0000048,6.00e-13,427;CL:0000723,1.34e-12,433;CL:0000767,8.19e-12,3;CL:0000081,5.42e-11,11;CL:0000623,3.31e-10,3;CL:0000825,3.31e-10,3;CL:0002393,2.30e-09,9;CL:0002397,2.30e-09,9;CL:0000771,7.88e-08,2;CL:0001014,1.77e-07,2;CL:0001016,1.77e-07,2;CL:0000097,5.74e-07,5;CL:0002028,5.74e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-52;42!CL:0000049;3.04e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.41e-37!86;UBERON:0002371!2.20e-37!80;UBERON:0004765!2.68e-30!101;UBERON:0001434!2.68e-30!101;UBERON:0002390!2.52e-29!102;UBERON:0003061!2.52e-29!102;UBERON:0002193!5.09e-26!112;UBERON:0002405!2.42e-24!115;UBERON:0002384!2.61e-13!375;UBERON:0002204!2.84e-12!167;UBERON:0003081!2.04e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-61,76;UBERON:0001474,2.30e-56,82;UBERON:0002390,6.48e-51,98;UBERON:0003061,6.48e-51,98;UBERON:0004765,1.62e-50,90;UBERON:0002405,1.39e-48,93;UBERON:0002193,2.77e-45,108;UBERON:0001434,1.63e-44,100;UBERON:0003081,4.43e-23,203;UBERON:0002204,9.23e-23,167;UBERON:0002384,9.46e-17,371;UBERON:0000926,3.93e-11,315;UBERON:0004120,3.93e-11,315;UBERON:0006603,3.93e-11,315 | |||
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| ||
|short_description=p@chr19:13961988..13962001,- | |||
}} | }} |
Latest revision as of 04:13, 26 July 2015
Short description: | p@chr19:13961988..13962001, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13961988..13962001, - |
Coexpression cluster: | C2360_Basophils_CD14_Mast_Natural_CD34_CD8_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.51e-61 | 76 |
bone element | 2.30e-56 | 82 |
hematopoietic system | 6.48e-51 | 98 |
blood island | 6.48e-51 | 98 |
skeletal element | 1.62e-50 | 90 |
immune system | 1.39e-48 | 93 |
hemolymphoid system | 2.77e-45 | 108 |
skeletal system | 1.63e-44 | 100 |
lateral plate mesoderm | 4.43e-23 | 203 |
musculoskeletal system | 9.23e-23 | 167 |
connective tissue | 9.46e-17 | 371 |
mesoderm | 3.93e-11 | 315 |
mesoderm-derived structure | 3.93e-11 | 315 |
presumptive mesoderm | 3.93e-11 | 315 |