FFCP PHASE1:Hg19::chr19:18111927..18111988,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:18111927..18111988,+
|short_description=p2@ARRDC2
|description=CAGE_peak_2_at_ARRDC2_5end
|association_with_transcript=0bp_to_ENST00000379656,NM_001025604...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27106 | |EntrezGene=27106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25225 | |HGNC=25225 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBH0 | |UniProt=Q8TBH0 | ||
|association_with_transcript=0bp_to_ENST00000379656,NM_001025604,uc002nhu.2_5end | |||
|cluster_id=chr19:18111927..18111988,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_ARRDC2_5end | |||
|id=chr19:18111927..18111988,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.10e-49!172;CL:0000566!3.10e-49!172;CL:0000988!1.72e-47!182;CL:0002032!9.61e-47!165;CL:0000837!9.61e-47!165;CL:0000738!2.72e-41!140;CL:0002031!7.90e-36!124;CL:0002087!2.96e-34!119;CL:0000763!5.82e-32!112;CL:0000049!5.82e-32!112;CL:0000766!3.40e-24!76;CL:0000557!9.30e-22!71;CL:0000839!9.95e-22!70;CL:0002009!2.82e-20!65;CL:0002194!1.61e-19!63;CL:0000576!1.61e-19!63;CL:0000040!1.61e-19!63;CL:0000559!1.61e-19!63;CL:0000860!1.83e-15!45;CL:0002057!9.06e-15!42;CL:0000838!6.52e-13!52;CL:0000542!7.23e-13!53;CL:0000051!7.23e-13!53;CL:0000791!2.31e-11!18;CL:0000789!2.31e-11!18;CL:0002420!2.31e-11!18;CL:0002419!2.31e-11!18;CL:0000790!2.31e-11!18;CL:0002320!2.95e-10!365;CL:0000134!6.45e-10!358;CL:0000084!8.18e-09!25;CL:0000827!8.18e-09!25;CL:0000625!1.03e-07!11;CL:0000219!2.12e-07!390;CL:0000236!7.74e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.01e-11;18!CL:0000789;1.01e-11;18!CL:0002419;1.01e-11;18!CL:0000576;6.44e-11;48!CL:0000766;8.52e-11;69!CL:0000473;2.07e-10;39!CL:0000234;2.07e-10;39!CL:0000860;9.21e-10;33!CL:0002057;9.21e-10;33!CL:0000738;1.30e-09;136!CL:0000763;1.69e-09;100!CL:0002087;2.54e-09;104!CL:0000084;3.30e-09;25!CL:0000542;7.58e-09;53!CL:0000988;2.24e-08;177!CL:0000625;6.70e-08;11!CL:0000236;1.44e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.64e-49,168;CL:0000988,1.49e-47,177;CL:0002032,8.13e-47,161;CL:0000837,8.13e-47,161;CL:0000738,2.05e-41,136;CL:0002031,5.96e-36,120;CL:0002087,2.16e-34,115;CL:0000763,3.53e-32,108;CL:0000049,3.53e-32,108;CL:0000766,1.66e-24,72;CL:0000557,4.85e-22,67;CL:0000839,5.07e-22,66;CL:0002009,1.38e-20,61;CL:0002194,7.99e-20,59;CL:0000576,7.99e-20,59;CL:0000040,7.99e-20,59;CL:0000559,7.99e-20,59;CL:0000473,3.57e-17,48;CL:0000234,3.57e-17,48;CL:0000860,7.84e-15,42;CL:0002057,7.84e-15,42;CL:0000838,6.94e-13,52;CL:0000542,7.69e-13,53;CL:0000051,7.69e-13,53;CL:0000791,2.08e-11,18;CL:0000789,2.08e-11,18;CL:0002420,2.08e-11,18;CL:0002419,2.08e-11,18;CL:0000790,2.08e-11,18;CL:0002320,5.12e-10,361;CL:0000134,1.11e-09,354;CL:0000084,9.35e-09,25;CL:0000827,9.35e-09,25;CL:0000625,9.62e-08,11;CL:0000219,3.79e-07,386;CL:0000236,7.30e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.01e-11;18!CL:0002057;6.49e-11;42!CL:0000049;8.58e-10;108!CL:0000051;7.58e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.87e-28!102;UBERON:0003061!3.87e-28!102;UBERON:0002193!3.17e-26!112;UBERON:0002371!7.41e-20!80;UBERON:0001474!3.65e-19!86;UBERON:0004765!1.12e-16!101;UBERON:0001434!1.12e-16!101;UBERON:0002405!1.70e-13!115;UBERON:0002384!2.53e-09!375;UBERON:0000178!2.91e-08!15;UBERON:0000179!2.91e-08!15;UBERON:0000463!2.91e-08!15;UBERON:0003081!4.03e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.88e-08;15!UBERON:0000179;1.88e-08;15!UBERON:0000463;1.88e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.54e-28,98;UBERON:0003061,2.54e-28,98;UBERON:0002193,2.10e-26,108;UBERON:0002371,5.57e-20,76;UBERON:0002405,1.19e-19,93;UBERON:0001474,3.14e-19,82;UBERON:0004765,3.77e-17,90;UBERON:0001434,6.37e-16,100;UBERON:0002384,3.84e-09,371;UBERON:0000178,2.70e-08,15;UBERON:0000179,2.70e-08,15;UBERON:0000463,2.70e-08,15;UBERON:0003081,2.07e-07,203 | |||
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| ||
|short_description=p2@ARRDC2 | |||
}} | }} |
Latest revision as of 13:32, 16 September 2015
Short description: | p2@ARRDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARRDC2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000379656, NM_001025604, uc002nhu.2_5end |
EntrezGene: | ARRDC2 |
HGNC: | 25225 |
UniProt: | Q8TBH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.54e-28 | 98 |
blood island | 2.54e-28 | 98 |
hemolymphoid system | 2.10e-26 | 108 |
bone marrow | 5.57e-20 | 76 |
immune system | 1.19e-19 | 93 |
bone element | 3.14e-19 | 82 |
skeletal element | 3.77e-17 | 90 |
skeletal system | 6.37e-16 | 100 |
connective tissue | 3.84e-09 | 371 |
blood | 2.70e-08 | 15 |
haemolymphatic fluid | 2.70e-08 | 15 |
organism substance | 2.70e-08 | 15 |
lateral plate mesoderm | 2.07e-07 | 203 |