FFCP PHASE1:Hg19::chr2:241375069..241375136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2817 | |EntrezGene=2817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |HGNC=4449 | ||
|TSSclassifier=strong | |||
|UniProt=P35052 | |UniProt=P35052 | ||
|association_with_transcript=0bp_to_ENST00000264039,NM_002081,uc002vyw.3_5end | |association_with_transcript=0bp_to_ENST00000264039,NM_002081,uc002vyw.3_5end | ||
|cluster_id=chr2:241375069..241375136,+ | |||
|coexpression_cluster_id=C1899 | |coexpression_cluster_id=C1899 | ||
|description=CAGE_peak_1_at_GPC1_5end | |description=CAGE_peak_1_at_GPC1_5end | ||
|id=chr2:241375069..241375136,+ | |id=chr2:241375069..241375136,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.61e-29!180;CL:0000220!1.21e-22!246;CL:0002321!2.43e-22!248;CL:0000057!6.80e-17!75;CL:0000183!8.30e-12!59;CL:0000680!4.82e-11!57;CL:0000056!4.82e-11!57;CL:0000355!4.82e-11!57;CL:0000222!7.38e-11!119;CL:0000187!2.24e-10!54;CL:0000393!4.44e-10!60;CL:0000211!4.44e-10!60;CL:0000066!9.42e-10!254;CL:0000548!8.02e-08!679;CL:0000004!8.02e-08!679;CL:0000255!8.02e-08!679;CL:0002076!2.55e-07!43;CL:0000012!4.04e-07!682;CL:0000144!5.03e-07!625 | |ontology_enrichment_celltype=CL:0000055!1.61e-29!180;CL:0000220!1.21e-22!246;CL:0002321!2.43e-22!248;CL:0000057!6.80e-17!75;CL:0000183!8.30e-12!59;CL:0000680!4.82e-11!57;CL:0000056!4.82e-11!57;CL:0000355!4.82e-11!57;CL:0000222!7.38e-11!119;CL:0000187!2.24e-10!54;CL:0000393!4.44e-10!60;CL:0000211!4.44e-10!60;CL:0000066!9.42e-10!254;CL:0000548!8.02e-08!679;CL:0000004!8.02e-08!679;CL:0000255!8.02e-08!679;CL:0002076!2.55e-07!43;CL:0000012!4.04e-07!682;CL:0000144!5.03e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000057;3.33e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.08e-22,250;CL:0000057,3.70e-17,76;CL:0000680,1.58e-11,58;CL:0000056,1.58e-11,58;CL:0000355,1.58e-11,58;CL:0000222,2.86e-11,121;CL:0000187,7.47e-11,55;CL:0000393,1.55e-10,61;CL:0000211,1.55e-10,61;CL:0000066,3.54e-09,253;CL:0000192,4.46e-07,43;CL:0000514,4.46e-07,43;CL:0002076,5.40e-07,42;CL:0000076,6.06e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.45e-24!365;UBERON:0000481!6.96e-17!347;UBERON:0005256!7.90e-17!143;UBERON:0002100!1.90e-15!216;UBERON:0003102!2.16e-15!95;UBERON:0000119!5.09e-15!312;UBERON:0000486!1.16e-14!82;UBERON:0000483!1.79e-14!309;UBERON:0000468!4.09e-14!659;UBERON:0000914!6.05e-14!83;UBERON:0002329!6.05e-14!83;UBERON:0003077!6.05e-14!83;UBERON:0003059!6.05e-14!83;UBERON:0007282!6.05e-14!83;UBERON:0009618!6.05e-14!83;UBERON:0007285!6.05e-14!83;UBERON:0003104!9.27e-13!238;UBERON:0009142!9.27e-13!238;UBERON:0000467!3.89e-12!625;UBERON:0000480!6.66e-12!626;UBERON:0004290!9.64e-12!70;UBERON:0001134!1.24e-10!61;UBERON:0002036!1.24e-10!61;UBERON:0003082!1.24e-10!61;UBERON:0002385!5.64e-10!63;UBERON:0001015!5.64e-10!63;UBERON:0000383!5.64e-10!63;UBERON:0000490!2.29e-09!138;UBERON:0002050!2.96e-08!605;UBERON:0005423!2.96e-08!605;UBERON:0000923!3.17e-08!604;UBERON:0005291!3.17e-08!604;UBERON:0006598!3.17e-08!604;UBERON:0002532!3.17e-08!604;UBERON:0000922!5.58e-08!612;UBERON:0000064!7.67e-08!219;UBERON:0000477!2.22e-07!286;UBERON:0003914!2.22e-07!118;UBERON:0002199!2.51e-07!45;UBERON:0002416!2.51e-07!45;UBERON:0001444!2.69e-07!48;UBERON:0004111!3.65e-07!241;UBERON:0004872!6.99e-07!84;UBERON:0004923!7.45e-07!57 | |ontology_enrichment_uberon=UBERON:0000475!1.45e-24!365;UBERON:0000481!6.96e-17!347;UBERON:0005256!7.90e-17!143;UBERON:0002100!1.90e-15!216;UBERON:0003102!2.16e-15!95;UBERON:0000119!5.09e-15!312;UBERON:0000486!1.16e-14!82;UBERON:0000483!1.79e-14!309;UBERON:0000468!4.09e-14!659;UBERON:0000914!6.05e-14!83;UBERON:0002329!6.05e-14!83;UBERON:0003077!6.05e-14!83;UBERON:0003059!6.05e-14!83;UBERON:0007282!6.05e-14!83;UBERON:0009618!6.05e-14!83;UBERON:0007285!6.05e-14!83;UBERON:0003104!9.27e-13!238;UBERON:0009142!9.27e-13!238;UBERON:0000467!3.89e-12!625;UBERON:0000480!6.66e-12!626;UBERON:0004290!9.64e-12!70;UBERON:0001134!1.24e-10!61;UBERON:0002036!1.24e-10!61;UBERON:0003082!1.24e-10!61;UBERON:0002385!5.64e-10!63;UBERON:0001015!5.64e-10!63;UBERON:0000383!5.64e-10!63;UBERON:0000490!2.29e-09!138;UBERON:0002050!2.96e-08!605;UBERON:0005423!2.96e-08!605;UBERON:0000923!3.17e-08!604;UBERON:0005291!3.17e-08!604;UBERON:0006598!3.17e-08!604;UBERON:0002532!3.17e-08!604;UBERON:0000922!5.58e-08!612;UBERON:0000064!7.67e-08!219;UBERON:0000477!2.22e-07!286;UBERON:0003914!2.22e-07!118;UBERON:0002199!2.51e-07!45;UBERON:0002416!2.51e-07!45;UBERON:0001444!2.69e-07!48;UBERON:0004111!3.65e-07!241;UBERON:0004872!6.99e-07!84;UBERON:0004923!7.45e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@GPC1 | |short_description=p1@GPC1 | ||
}} | }} |
Latest revision as of 07:23, 16 September 2015
Short description: | p1@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPC1_5end |
Coexpression cluster: | C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes |
Association with transcript: | 0bp_to_ENST00000264039, NM_002081, uc002vyw.3_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.08e-22 | 250 |
fibroblast | 3.70e-17 | 76 |
muscle precursor cell | 1.58e-11 | 58 |
myoblast | 1.58e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-11 | 58 |
mesodermal cell | 2.86e-11 | 121 |
muscle cell | 7.47e-11 | 55 |
electrically responsive cell | 1.55e-10 | 61 |
electrically active cell | 1.55e-10 | 61 |
epithelial cell | 3.54e-09 | 253 |
smooth muscle cell | 4.46e-07 | 43 |
smooth muscle myoblast | 4.46e-07 | 43 |
endo-epithelial cell | 5.40e-07 | 42 |
squamous epithelial cell | 6.06e-07 | 63 |