FFCP PHASE1:Hg19::chr5:151066486..151066501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt=P09486 | |UniProt=P09486 | ||
|association_with_transcript=15bp_to_NM_003118,uc003lui.2_5end | |association_with_transcript=15bp_to_NM_003118,uc003lui.2_5end | ||
|cluster_id=chr5:151066486..151066501,- | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_2_at_SPARC_5end | |description=CAGE_peak_2_at_SPARC_5end | ||
|id=chr5:151066486..151066501,- | |id=chr5:151066486..151066501,- | ||
|ontology_enrichment_celltype=CL:0000055!1.43e-34!180;CL:0000057!2.69e-19!75;CL:0000222!5.10e-17!119;CL:0000183!4.54e-14!59;CL:0000680!6.35e-14!57;CL:0000056!6.35e-14!57;CL:0000355!6.35e-14!57;CL:0000187!2.94e-13!54;CL:0000192!1.27e-11!42;CL:0000514!1.27e-11!42;CL:0000393!2.14e-11!60;CL:0000211!2.14e-11!60;CL:0000136!1.02e-09!15;CL:0000359!3.69e-09!32;CL:0000220!9.71e-08!246;CL:0002321!1.43e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.43e-34!180;CL:0000057!2.69e-19!75;CL:0000222!5.10e-17!119;CL:0000183!4.54e-14!59;CL:0000680!6.35e-14!57;CL:0000056!6.35e-14!57;CL:0000355!6.35e-14!57;CL:0000187!2.94e-13!54;CL:0000192!1.27e-11!42;CL:0000514!1.27e-11!42;CL:0000393!2.14e-11!60;CL:0000211!2.14e-11!60;CL:0000136!1.02e-09!15;CL:0000359!3.69e-09!32;CL:0000220!9.71e-08!246;CL:0002321!1.43e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.71e-10;55!CL:0000048;4.28e-09;58!CL:0000723;5.67e-09;61!CL:0000136;7.08e-09;13!CL:0000192;1.09e-08;43!CL:0000359;1.16e-08;32!CL:0000349;1.86e-08;19!CL:0000057;4.58e-08;73!CL:0000187;8.80e-08;55!CL:0002320;1.82e-07;188!CL:0002334;9.64e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.77e-20,76;CL:0000222,3.24e-17,121;CL:0000680,3.00e-14,58;CL:0000056,3.00e-14,58;CL:0000355,3.00e-14,58;CL:0000187,1.40e-13,55;CL:0000192,6.21e-12,43;CL:0000514,6.21e-12,43;CL:0000393,1.06e-11,61;CL:0000211,1.06e-11,61;CL:0000136,9.48e-10,15;CL:0000359,3.45e-09,32;CL:0000349,1.86e-08,19;CL:0002321,1.19e-07,250;CL:0002334,9.62e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.09e-08;43!CL:0000355;7.32e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.16e-16!83;UBERON:0002329!8.16e-16!83;UBERON:0003077!8.16e-16!83;UBERON:0003059!8.16e-16!83;UBERON:0007282!8.16e-16!83;UBERON:0009618!8.16e-16!83;UBERON:0007285!8.16e-16!83;UBERON:0000475!8.70e-16!365;UBERON:0004872!4.09e-15!84;UBERON:0001134!2.29e-14!61;UBERON:0002036!2.29e-14!61;UBERON:0003082!2.29e-14!61;UBERON:0004290!3.55e-14!70;UBERON:0002385!6.36e-14!63;UBERON:0001015!6.36e-14!63;UBERON:0000383!6.36e-14!63;UBERON:0002049!1.51e-13!79;UBERON:0007798!1.51e-13!79;UBERON:0004535!2.30e-13!110;UBERON:0001009!4.35e-13!113;UBERON:0005256!2.10e-11!143;UBERON:0000486!2.20e-11!82;UBERON:0000468!4.06e-11!659;UBERON:0000055!6.50e-11!69;UBERON:0001981!2.61e-10!60;UBERON:0007500!2.61e-10!60;UBERON:0004537!2.61e-10!60;UBERON:0006965!2.61e-10!60;UBERON:0001637!2.12e-09!42;UBERON:0003509!2.12e-09!42;UBERON:0004572!2.12e-09!42;UBERON:0000119!2.57e-09!312;UBERON:0003914!2.76e-09!118;UBERON:0000483!5.57e-09!309;UBERON:0000490!2.07e-08!138;UBERON:0004573!6.06e-08!33;UBERON:0004571!6.06e-08!33;UBERON:0002100!6.26e-08!216;UBERON:0000467!7.24e-08!625;UBERON:0000480!9.34e-08!626;UBERON:0004111!1.38e-07!241;UBERON:0000477!2.64e-07!286;UBERON:0000478!4.96e-07!24;UBERON:0001013!5.13e-07!14;UBERON:0000481!6.44e-07!347;UBERON:0000025!9.98e-07!194 | |ontology_enrichment_uberon=UBERON:0000914!8.16e-16!83;UBERON:0002329!8.16e-16!83;UBERON:0003077!8.16e-16!83;UBERON:0003059!8.16e-16!83;UBERON:0007282!8.16e-16!83;UBERON:0009618!8.16e-16!83;UBERON:0007285!8.16e-16!83;UBERON:0000475!8.70e-16!365;UBERON:0004872!4.09e-15!84;UBERON:0001134!2.29e-14!61;UBERON:0002036!2.29e-14!61;UBERON:0003082!2.29e-14!61;UBERON:0004290!3.55e-14!70;UBERON:0002385!6.36e-14!63;UBERON:0001015!6.36e-14!63;UBERON:0000383!6.36e-14!63;UBERON:0002049!1.51e-13!79;UBERON:0007798!1.51e-13!79;UBERON:0004535!2.30e-13!110;UBERON:0001009!4.35e-13!113;UBERON:0005256!2.10e-11!143;UBERON:0000486!2.20e-11!82;UBERON:0000468!4.06e-11!659;UBERON:0000055!6.50e-11!69;UBERON:0001981!2.61e-10!60;UBERON:0007500!2.61e-10!60;UBERON:0004537!2.61e-10!60;UBERON:0006965!2.61e-10!60;UBERON:0001637!2.12e-09!42;UBERON:0003509!2.12e-09!42;UBERON:0004572!2.12e-09!42;UBERON:0000119!2.57e-09!312;UBERON:0003914!2.76e-09!118;UBERON:0000483!5.57e-09!309;UBERON:0000490!2.07e-08!138;UBERON:0004573!6.06e-08!33;UBERON:0004571!6.06e-08!33;UBERON:0002100!6.26e-08!216;UBERON:0000467!7.24e-08!625;UBERON:0000480!9.34e-08!626;UBERON:0004111!1.38e-07!241;UBERON:0000477!2.64e-07!286;UBERON:0000478!4.96e-07!24;UBERON:0001013!5.13e-07!14;UBERON:0000481!6.44e-07!347;UBERON:0000025!9.98e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.50e-08;198!UBERON:0004573;2.79e-07;33!UBERON:0004571;2.79e-07;33!UBERON:0001637;4.00e-07;42!UBERON:0003509;4.00e-07;42!UBERON:0004572;4.00e-07;42!UBERON:0000478;4.62e-07;24!UBERON:0001013;4.90e-07;14 | |||
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| ||
|short_description=p2@SPARC | |short_description=p2@SPARC | ||
}} | }} |
Latest revision as of 10:32, 16 September 2015
Short description: | p2@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 15bp_to_NM_003118, uc003lui.2_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | P09486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.77e-20 | 76 |
mesodermal cell | 3.24e-17 | 121 |
muscle precursor cell | 3.00e-14 | 58 |
myoblast | 3.00e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.00e-14 | 58 |
muscle cell | 1.40e-13 | 55 |
smooth muscle cell | 6.21e-12 | 43 |
smooth muscle myoblast | 6.21e-12 | 43 |
electrically responsive cell | 1.06e-11 | 61 |
electrically active cell | 1.06e-11 | 61 |
fat cell | 9.48e-10 | 15 |
vascular associated smooth muscle cell | 3.45e-09 | 32 |
extraembryonic cell | 1.86e-08 | 19 |
embryonic cell | 1.19e-07 | 250 |
preadipocyte | 9.62e-07 | 12 |