FFCP PHASE1:Hg19::chr5:58571829..58571862,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=82bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | |association_with_transcript=82bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | ||
|cluster_id=chr5:58571829..58571862,- | |||
|coexpression_cluster_id=C2825 | |coexpression_cluster_id=C2825 | ||
|description=CAGE_peak_9_at_PDE4D_5end | |description=CAGE_peak_9_at_PDE4D_5end | ||
|id=chr5:58571829..58571862,- | |id=chr5:58571829..58571862,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.71e-14;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;7.90e-16;9!UBERON:0001557;7.90e-16;9!UBERON:0001950;4.20e-14;20!UBERON:0002619;1.69e-12;22!UBERON:0000956;1.44e-10;25!UBERON:0000203;1.44e-10;25!UBERON:0001869;5.05e-09;32!UBERON:0007023;1.37e-08;114!UBERON:0000200;1.74e-08;6!UBERON:0001893;2.38e-08;34!UBERON:0002791;9.07e-08;32!UBERON:0003528;2.79e-07;34!UBERON:0002020;2.79e-07;34!UBERON:0001872;2.81e-07;5!UBERON:0000065;8.50e-07;44 | |||
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| ||
|short_description=p9@PDE4D | |short_description=p9@PDE4D | ||
}} | }} |
Latest revision as of 07:34, 18 September 2015
Short description: | p9@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE4D_5end |
Coexpression cluster: | C2825_cervical_gall_bile_rectal_epitheloid_large_umbilical |
Association with transcript: | 82bp_to_ENST00000503258, NM_001197220, uc003jrv.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.08e-30 | 114 |
larynx | 8.38e-16 | 9 |
neocortex | 4.40e-14 | 20 |
regional part of cerebral cortex | 1.76e-12 | 22 |
organ system subdivision | 2.22e-12 | 223 |
cerebral cortex | 1.50e-10 | 25 |
pallium | 1.50e-10 | 25 |
upper respiratory tract | 2.15e-10 | 19 |
subdivision of digestive tract | 3.54e-10 | 118 |
cerebral hemisphere | 9.89e-10 | 32 |
digestive system | 1.78e-09 | 145 |
digestive tract | 1.78e-09 | 145 |
primitive gut | 1.78e-09 | 145 |
respiratory primordium | 2.76e-09 | 38 |
endoderm of foregut | 2.76e-09 | 38 |
telencephalon | 6.50e-09 | 34 |
regional part of forebrain | 1.65e-08 | 41 |
forebrain | 1.65e-08 | 41 |
anterior neural tube | 1.65e-08 | 41 |
future forebrain | 1.65e-08 | 41 |
regional part of telencephalon | 1.66e-08 | 32 |
gyrus | 1.94e-08 | 6 |
endoderm-derived structure | 4.30e-08 | 160 |
endoderm | 4.30e-08 | 160 |
presumptive endoderm | 4.30e-08 | 160 |
neural tube | 4.78e-08 | 56 |
neural rod | 4.78e-08 | 56 |
future spinal cord | 4.78e-08 | 56 |
neural keel | 4.78e-08 | 56 |
brain grey matter | 8.77e-08 | 34 |
gray matter | 8.77e-08 | 34 |
respiratory tract | 2.55e-07 | 54 |
parietal lobe | 4.94e-07 | 5 |
regional part of nervous system | 5.50e-07 | 53 |
regional part of brain | 5.50e-07 | 53 |