FFCP PHASE1:Hg19::chr6:34213016..34213037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:34213016..34213037,+ | |||
|coexpression_cluster_id=C4595 | |coexpression_cluster_id=C4595 | ||
|description=CAGE_peak_at_chr6:34213016..34213037,+ | |description=CAGE_peak_at_chr6:34213016..34213037,+ | ||
|id=chr6:34213016..34213037,+ | |id=chr6:34213016..34213037,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.20e-23!682;CL:0000548!1.63e-23!679;CL:0000004!1.63e-23!679;CL:0000255!1.63e-23!679;CL:0002321!1.09e-21!248;CL:0000220!5.88e-21!246;CL:0000144!3.24e-19!625;CL:0000222!1.37e-15!119;CL:0000003!4.21e-15!722;CL:0002371!2.24e-13!591;CL:0000066!7.42e-12!254;CL:0000115!3.15e-10!35;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000183!1.52e-09!59;CL:0000055!2.22e-09!180;CL:0000071!3.76e-09!18;CL:0002546!3.76e-09!18;CL:0000213!6.93e-09!57;CL:0000215!6.93e-09!57;CL:0002139!1.47e-08!24;CL:0002078!4.45e-08!44;CL:0000187!5.82e-08!54;CL:0000680!1.04e-07!57;CL:0000056!1.04e-07!57;CL:0000355!1.04e-07!57;CL:1000449!1.54e-07!16;CL:0000063!1.71e-07!578;CL:0000192!7.20e-07!42;CL:0000514!7.20e-07!42 | |ontology_enrichment_celltype=CL:0000012!1.20e-23!682;CL:0000548!1.63e-23!679;CL:0000004!1.63e-23!679;CL:0000255!1.63e-23!679;CL:0002321!1.09e-21!248;CL:0000220!5.88e-21!246;CL:0000144!3.24e-19!625;CL:0000222!1.37e-15!119;CL:0000003!4.21e-15!722;CL:0002371!2.24e-13!591;CL:0000066!7.42e-12!254;CL:0000115!3.15e-10!35;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000183!1.52e-09!59;CL:0000055!2.22e-09!180;CL:0000071!3.76e-09!18;CL:0002546!3.76e-09!18;CL:0000213!6.93e-09!57;CL:0000215!6.93e-09!57;CL:0002139!1.47e-08!24;CL:0002078!4.45e-08!44;CL:0000187!5.82e-08!54;CL:0000680!1.04e-07!57;CL:0000056!1.04e-07!57;CL:0000355!1.04e-07!57;CL:1000449!1.54e-07!16;CL:0000063!1.71e-07!578;CL:0000192!7.20e-07!42;CL:0000514!7.20e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.88e-11;18!CL:0000115;1.48e-10;36!CL:0002139;3.25e-09;24!CL:1000449;2.86e-08;15!CL:0002681;2.41e-07;12!CL:0002584;2.41e-07;12!CL:1000746;4.12e-07;7!CL:1000612;4.12e-07;7!CL:0002551;5.48e-07;6!CL:1000497;7.50e-07;17!CL:0002518;7.50e-07;17!CL:0002078;8.79e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.41e-21,250;CL:0000222,1.59e-20,121;CL:0000115,2.40e-12,36;CL:0000393,3.64e-12,61;CL:0000211,3.64e-12,61;CL:0000071,1.67e-11,18;CL:0002546,1.67e-11,18;CL:0000213,1.01e-10,58;CL:0000215,1.01e-10,58;CL:0002078,2.54e-10,45;CL:0000187,3.30e-10,55;CL:0000680,5.10e-10,58;CL:0000056,5.10e-10,58;CL:0000355,5.10e-10,58;CL:0002139,2.24e-09,24;CL:1000449,3.50e-08,15;CL:0000066,3.94e-08,253;CL:0000192,1.74e-07,43;CL:0000514,1.74e-07,43;CL:0002681,2.70e-07,12;CL:0002584,2.70e-07,12;CL:1000746,4.90e-07,7;CL:1000612,4.90e-07,7;CL:0002551,8.08e-07,6;CL:1000497,8.86e-07,17;CL:0002518,8.86e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.88e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.33e-11!79;UBERON:0007798!3.33e-11!79;UBERON:0000055!1.17e-10!69;UBERON:0003914!2.42e-10!118;UBERON:0001981!4.39e-10!60;UBERON:0007500!4.39e-10!60;UBERON:0004537!4.39e-10!60;UBERON:0006965!4.39e-10!60;UBERON:0004290!1.75e-09!70;UBERON:0001637!3.06e-09!42;UBERON:0003509!3.06e-09!42;UBERON:0004572!3.06e-09!42;UBERON:0001986!3.76e-09!18;UBERON:0004638!3.76e-09!18;UBERON:0004852!3.76e-09!18;UBERON:0000486!8.19e-09!82;UBERON:0000914!1.03e-08!83;UBERON:0002329!1.03e-08!83;UBERON:0003077!1.03e-08!83;UBERON:0003059!1.03e-08!83;UBERON:0007282!1.03e-08!83;UBERON:0009618!1.03e-08!83;UBERON:0007285!1.03e-08!83;UBERON:0005256!1.95e-08!143;UBERON:0000490!5.74e-08!138;UBERON:0004872!1.23e-07!84;UBERON:0004211!1.54e-07!16;UBERON:0001285!1.54e-07!16;UBERON:0007684!1.54e-07!16;UBERON:0003220!1.54e-07!16;UBERON:0004208!1.54e-07!16;UBERON:0000487!1.59e-07!22;UBERON:0006555!5.31e-07!17;UBERON:0005103!5.31e-07!17;UBERON:0000083!5.31e-07!17;UBERON:0009201!5.31e-07!17;UBERON:0004819!5.31e-07!17;UBERON:0006553!5.31e-07!17;UBERON:0003074!5.31e-07!17;UBERON:0003060!5.31e-07!17 | |ontology_enrichment_uberon=UBERON:0002049!3.33e-11!79;UBERON:0007798!3.33e-11!79;UBERON:0000055!1.17e-10!69;UBERON:0003914!2.42e-10!118;UBERON:0001981!4.39e-10!60;UBERON:0007500!4.39e-10!60;UBERON:0004537!4.39e-10!60;UBERON:0006965!4.39e-10!60;UBERON:0004290!1.75e-09!70;UBERON:0001637!3.06e-09!42;UBERON:0003509!3.06e-09!42;UBERON:0004572!3.06e-09!42;UBERON:0001986!3.76e-09!18;UBERON:0004638!3.76e-09!18;UBERON:0004852!3.76e-09!18;UBERON:0000486!8.19e-09!82;UBERON:0000914!1.03e-08!83;UBERON:0002329!1.03e-08!83;UBERON:0003077!1.03e-08!83;UBERON:0003059!1.03e-08!83;UBERON:0007282!1.03e-08!83;UBERON:0009618!1.03e-08!83;UBERON:0007285!1.03e-08!83;UBERON:0005256!1.95e-08!143;UBERON:0000490!5.74e-08!138;UBERON:0004872!1.23e-07!84;UBERON:0004211!1.54e-07!16;UBERON:0001285!1.54e-07!16;UBERON:0007684!1.54e-07!16;UBERON:0003220!1.54e-07!16;UBERON:0004208!1.54e-07!16;UBERON:0000487!1.59e-07!22;UBERON:0006555!5.31e-07!17;UBERON:0005103!5.31e-07!17;UBERON:0000083!5.31e-07!17;UBERON:0009201!5.31e-07!17;UBERON:0004819!5.31e-07!17;UBERON:0006553!5.31e-07!17;UBERON:0003074!5.31e-07!17;UBERON:0003060!5.31e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.88e-11;18!UBERON:0001986;1.88e-11;18!UBERON:0004852;1.88e-11;18!UBERON:0003914;1.33e-09;74!UBERON:0000487;1.86e-09;22!UBERON:0006555;2.86e-08;15!UBERON:0004819;2.86e-08;15!UBERON:0001285;2.86e-08;15!UBERON:0007684;2.86e-08;15!UBERON:0007500;3.02e-08;56!UBERON:0001981;3.02e-08;56!UBERON:0004537;3.02e-08;56!UBERON:0006914;1.13e-07;25!UBERON:0000490;1.17e-07;33!UBERON:0001637;1.22e-07;42!UBERON:0003509;1.22e-07;42!UBERON:0004572;1.22e-07;42!UBERON:0000353;1.24e-07;15!UBERON:0002067;1.26e-07;9!UBERON:0001225;2.41e-07;12!UBERON:0008987;2.41e-07;12!UBERON:0004573;3.03e-07;33!UBERON:0004571;3.03e-07;33!UBERON:0000074;4.12e-07;7!UBERON:0001229;4.12e-07;7 | |||
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| ||
|short_description=p@chr6:34213016..34213037,+ | |short_description=p@chr6:34213016..34213037,+ | ||
}} | }} |
Latest revision as of 00:51, 31 July 2015
Short description: | p@chr6:34213016..34213037, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:34213016..34213037, + |
Coexpression cluster: | C4595_iPS_Fibroblast_Alveolar_meningioma_Endothelial_choriocarcinoma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.41e-21 | 250 |
mesodermal cell | 1.59e-20 | 121 |
endothelial cell | 2.40e-12 | 36 |
electrically responsive cell | 3.64e-12 | 61 |
electrically active cell | 3.64e-12 | 61 |
blood vessel endothelial cell | 1.67e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-11 | 18 |
lining cell | 1.01e-10 | 58 |
barrier cell | 1.01e-10 | 58 |
meso-epithelial cell | 2.54e-10 | 45 |
muscle cell | 3.30e-10 | 55 |
muscle precursor cell | 5.10e-10 | 58 |
myoblast | 5.10e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.10e-10 | 58 |
endothelial cell of vascular tree | 2.24e-09 | 24 |
epithelial cell of nephron | 3.50e-08 | 15 |
epithelial cell | 3.94e-08 | 253 |
smooth muscle cell | 1.74e-07 | 43 |
smooth muscle myoblast | 1.74e-07 | 43 |
kidney cortical cell | 2.70e-07 | 12 |
renal cortical epithelial cell | 2.70e-07 | 12 |
glomerular cell | 4.90e-07 | 7 |
kidney corpuscule cell | 4.90e-07 | 7 |
fibroblast of dermis | 8.08e-07 | 6 |
kidney cell | 8.86e-07 | 17 |
kidney epithelial cell | 8.86e-07 | 17 |