FFCP PHASE1:Hg19::chr19:44169575..44169593,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:44169575..44169593,-
|short_description=p@chr19:44169575..44169593,-
|description=CAGE_peak_at_chr19:44169575..44169593,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:44169575..44169593,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr19:44169575..44169593,- | |||
|id=chr19:44169575..44169593,- | |||
|ontology_enrichment_celltype=CL:0000766!6.91e-40!76;CL:0002009!4.08e-37!65;CL:0002194!1.14e-35!63;CL:0000576!1.14e-35!63;CL:0000040!1.14e-35!63;CL:0000559!1.14e-35!63;CL:0000557!4.06e-34!71;CL:0002057!1.23e-33!42;CL:0000860!1.91e-33!45;CL:0000839!7.52e-32!70;CL:0000763!2.43e-24!112;CL:0000049!2.43e-24!112;CL:0000723!3.77e-19!436;CL:0000048!6.15e-19!430;CL:0000034!1.18e-18!444;CL:0000738!1.00e-15!140;CL:0002320!5.52e-15!365;CL:0000012!1.84e-14!682;CL:0000548!2.53e-14!679;CL:0000004!2.53e-14!679;CL:0000255!2.53e-14!679;CL:0000134!3.36e-14!358;CL:0002371!8.21e-14!591;CL:0000144!1.94e-13!625;CL:0002087!5.04e-13!119;CL:0002031!5.30e-12!124;CL:0000219!9.19e-12!390;CL:0000037!1.36e-10!172;CL:0000566!1.36e-10!172;CL:0002032!2.46e-10!165;CL:0000837!2.46e-10!165;CL:0000988!3.07e-10!182;CL:0000003!5.07e-10!722;CL:0000063!2.53e-08!578;CL:0000094!1.28e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.45e-70;33!CL:0002057;3.45e-70;33!CL:0000473;2.52e-65;39!CL:0000234;2.52e-65;39!CL:0000576;2.93e-42;48!CL:0000766;1.00e-35;69!CL:0000763;2.57e-16;100!CL:0000094;7.05e-13;8!CL:0000235;2.58e-11;6!CL:0002393;3.13e-11;6!CL:0002397;3.13e-11;6!CL:0002087;2.04e-10;104!CL:0000738;8.06e-10;136!CL:0000081;3.71e-09;11!CL:0000771;3.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.15e-88,48;CL:0000234,1.15e-88,48;CL:0000860,1.40e-78,42;CL:0002057,1.40e-78,42;CL:0000766,1.06e-74,72;CL:0002009,9.06e-70,61;CL:0002194,1.06e-68,59;CL:0000576,1.06e-68,59;CL:0000040,1.06e-68,59;CL:0000559,1.06e-68,59;CL:0000557,1.30e-62,67;CL:0000839,2.32e-60,66;CL:0000763,1.58e-50,108;CL:0000049,1.58e-50,108;CL:0000738,1.36e-39,136;CL:0002087,7.34e-34,115;CL:0000037,3.90e-31,168;CL:0002031,2.75e-30,120;CL:0002032,6.76e-30,161;CL:0000837,6.76e-30,161;CL:0000988,6.49e-29,177;CL:0000048,3.73e-14,427;CL:0000723,9.39e-14,433;CL:0000034,3.09e-13,441;CL:0000134,3.54e-13,354;CL:0000094,4.45e-13,8;CL:0002320,1.16e-12,361;CL:0000235,4.82e-11,6;CL:0000219,7.50e-11,386;CL:0000081,2.68e-09,11;CL:0002393,1.64e-07,9;CL:0002397,1.64e-07,9;CL:0000771,2.91e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-56;42!CL:0000049;5.89e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.29e-09;3!DOID:127;8.29e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.26e-09,3;DOID:127,4.26e-09,3;DOID:0060072,6.46e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.10e-31!80;UBERON:0001474!2.42e-29!86;UBERON:0004765!9.38e-26!101;UBERON:0001434!9.38e-26!101;UBERON:0002204!1.23e-24!167;UBERON:0002390!1.95e-23!102;UBERON:0003061!1.95e-23!102;UBERON:0002193!1.44e-19!112;UBERON:0002405!9.74e-17!115;UBERON:0003081!1.29e-16!216;UBERON:0002384!2.26e-14!375;UBERON:0000926!1.73e-12!448;UBERON:0004120!1.73e-12!448;UBERON:0006603!1.73e-12!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.66e-54,76;UBERON:0001474,2.94e-49,82;UBERON:0002390,2.43e-46,98;UBERON:0003061,2.43e-46,98;UBERON:0004765,6.12e-44,90;UBERON:0002405,3.52e-42,93;UBERON:0002193,5.25e-41,108;UBERON:0001434,1.76e-38,100;UBERON:0002204,6.17e-28,167;UBERON:0003081,9.90e-26,203;UBERON:0000926,4.51e-18,315;UBERON:0004120,4.51e-18,315;UBERON:0006603,4.51e-18,315;UBERON:0002384,5.85e-12,371 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,1.34465029290355,0,1.46062018077475,0.487932798790507,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,1.96682138424452,1.53531759238885,0.464448369948228,0.919421224478927,0,0.369754010166788,0,0,0,1.66198622559563,4.41197784434312,1.95309783644267,0,0.32389366601898,0,0.726991193897824,1.13362783106643,1.21292030593908,3.48643555358527,5.75635043230556,7.12324653058738,5.17846306179871,4.61089271752381,7.33094912654614,15.5135556331478,13.5551783552603,16.251178391321,5.83551252582075,3.0019676506363,6.06753408001728,38.2604865463628,14.4418062184242,39.6389017995406,0.989553900560148,1.19678194572979,1.27867425159808,14.2202526928006,14.1846306172785,16.8162007228805,4.01997864410789,6.25779502104242,2.6062661364614,9.08099253950053,12.5214396235772,12.9749578850763,1.26753171787165,1.4882300997553,0.419317291016752,1.57260083605093,2.70318407114711,0.803627933485401,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,1.77383517970051,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0.531831842075461,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0,3.9534125230819,15.511210565933,0,0,0.12663051166458,0,0,0,0.560677600142307,1.06748995729705,0.74000264525148,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0.587172493218824,0.485618833104395,0.280901613404497,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0,0,0,0,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0,0.474541238222193,0.674156540800822,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0.984868024349589,1.40402559083543,1.18904929830983,0,0,0.283550194484773,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.4400297149257,0.129271715757778,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,0,0,0.871533458600294,0.099972991182057,2.43247561282381,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0.385029108839245,0,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,8.23907726341901,11.966458368161,0.828831026872071,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0.686286847621712,0.620304078368662,3.45142721309787,1.06727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0.771048469013278,0.355123450626254,0.0821271560138091,2.59627214591811,0.581051892299796,0.120859449591622,0.200506470303285,0.0920809889358963,0.459257792658427,0.364182336013434,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0.462145851343933,0.460511024178389,0.689182862422653,0.429680979473094,0,0.255679882248303,0,0,0.384380134730212,0,0,0,0.94443704049192,0,0.924100740528266,0,0,0.55597265731176,0,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0.353437207037059,0.202182481573316,0,1.26377536871694,0,1.21856744815642,3.16950440270266,0,0.848432591722276,3.39024349860728,0,1.32687795048244,0.876901770507525,0,0,0,0.6196469961995,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,1.03051603426729,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982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| ||
|short_description=p@chr19:44169575..44169593,- | |||
}} | }} |
Latest revision as of 14:31, 27 July 2015
Short description: | p@chr19:44169575..44169593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:44169575..44169593, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.66e-54 | 76 |
bone element | 2.94e-49 | 82 |
hematopoietic system | 2.43e-46 | 98 |
blood island | 2.43e-46 | 98 |
skeletal element | 6.12e-44 | 90 |
immune system | 3.52e-42 | 93 |
hemolymphoid system | 5.25e-41 | 108 |
skeletal system | 1.76e-38 | 100 |
musculoskeletal system | 6.17e-28 | 167 |
lateral plate mesoderm | 9.90e-26 | 203 |
mesoderm | 4.51e-18 | 315 |
mesoderm-derived structure | 4.51e-18 | 315 |
presumptive mesoderm | 4.51e-18 | 315 |
connective tissue | 5.85e-12 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.26e-09 | 3 |
leiomyoma | 4.26e-09 | 3 |
benign neoplasm | 6.46e-07 | 4 |