FF:12148-128F6: Difference between revisions

Latest revision as of 18:32, 4 June 2020

Name:	CD8+ T Cells (pluriselect), donor090325, donation1
Species:	Human (Homo sapiens)
Library ID:	CNhs12201
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	NA
cell type	T cell, CD8+
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005124

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12201		CAGE		DRX008067		DRR008939

Accession ID Hg19

Library id		BAM		CTSS
CNhs12201		DRZ000364		DRZ001749

Accession ID Hg38

Library id		BAM		CTSS
CNhs12201		DRZ011714		DRZ013099

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.162
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.19
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.223
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.114
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.0609
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.403
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.39
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.776
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.697
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.114
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.0469
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.348
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.0609
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.114
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.449
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.162
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.399
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.219
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.462
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.212
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.114
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.372
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.119
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.569
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.255
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.56
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.241
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0.0609
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.244
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.205
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.205
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.224
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.907
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.114
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.0609
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.0609
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.73
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12201

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	1.22595e-9
MA0003.1	MA0003.1	0.491
MA0004.1	MA0004.1	0.689
MA0006.1	MA0006.1	0.29
MA0007.1	MA0007.1	0.676
MA0009.1	MA0009.1	0.251
MA0014.1	MA0014.1	0.81
MA0017.1	MA0017.1	0.0358
MA0018.2	MA0018.2	0.304
MA0019.1	MA0019.1	0.516
MA0024.1	MA0024.1	0.243
MA0025.1	MA0025.1	0.346
MA0027.1	MA0027.1	0.67
MA0028.1	MA0028.1	2.4628e-7
MA0029.1	MA0029.1	0.919
MA0030.1	MA0030.1	0.0252
MA0031.1	MA0031.1	0.00235
MA0035.2	MA0035.2	0.155
MA0038.1	MA0038.1	0.18
MA0039.2	MA0039.2	0.456
MA0040.1	MA0040.1	0.224
MA0041.1	MA0041.1	0.229
MA0042.1	MA0042.1	0.206
MA0043.1	MA0043.1	0.263
MA0046.1	MA0046.1	0.547
MA0047.2	MA0047.2	0.0231
MA0048.1	MA0048.1	0.189
MA0050.1	MA0050.1	6.78281e-10
MA0051.1	MA0051.1	2.88432e-5
MA0052.1	MA0052.1	0.0493
MA0055.1	MA0055.1	0.634
MA0057.1	MA0057.1	0.604
MA0058.1	MA0058.1	0.396
MA0059.1	MA0059.1	0.516
MA0060.1	MA0060.1	0.185
MA0061.1	MA0061.1	1.28376e-4
MA0062.2	MA0062.2	4.13705e-26
MA0065.2	MA0065.2	0.0469
MA0066.1	MA0066.1	0.369
MA0067.1	MA0067.1	0.21
MA0068.1	MA0068.1	0.388
MA0069.1	MA0069.1	0.687
MA0070.1	MA0070.1	0.358
MA0071.1	MA0071.1	0.835
MA0072.1	MA0072.1	0.278
MA0073.1	MA0073.1	0.808
MA0074.1	MA0074.1	0.718
MA0076.1	MA0076.1	3.51631e-12
MA0077.1	MA0077.1	0.0518
MA0078.1	MA0078.1	0.706
MA0079.2	MA0079.2	0.935
MA0080.2	MA0080.2	1.9682e-14
MA0081.1	MA0081.1	0.00164
MA0083.1	MA0083.1	0.0349
MA0084.1	MA0084.1	0.587
MA0087.1	MA0087.1	0.516
MA0088.1	MA0088.1	0.0413
MA0090.1	MA0090.1	4.64849e-4
MA0091.1	MA0091.1	0.99
MA0092.1	MA0092.1	0.853
MA0093.1	MA0093.1	0.688
MA0099.2	MA0099.2	0.159
MA0100.1	MA0100.1	0.348
MA0101.1	MA0101.1	0.0465
MA0102.2	MA0102.2	0.0659
MA0103.1	MA0103.1	0.232
MA0104.2	MA0104.2	0.122
MA0105.1	MA0105.1	1.61252e-5
MA0106.1	MA0106.1	0.181
MA0107.1	MA0107.1	0.0513
MA0108.2	MA0108.2	8.998e-9
MA0111.1	MA0111.1	0.274
MA0112.2	MA0112.2	0.504
MA0113.1	MA0113.1	0.718
MA0114.1	MA0114.1	0.339
MA0115.1	MA0115.1	0.811
MA0116.1	MA0116.1	6.97936e-5
MA0117.1	MA0117.1	0.542
MA0119.1	MA0119.1	0.302
MA0122.1	MA0122.1	0.188
MA0124.1	MA0124.1	0.607
MA0125.1	MA0125.1	0.545
MA0131.1	MA0131.1	0.35
MA0135.1	MA0135.1	0.511
MA0136.1	MA0136.1	8.19029e-28
MA0137.2	MA0137.2	0.00216
MA0138.2	MA0138.2	0.99
MA0139.1	MA0139.1	0.00597
MA0140.1	MA0140.1	0.187
MA0141.1	MA0141.1	0.782
MA0142.1	MA0142.1	0.641
MA0143.1	MA0143.1	0.445
MA0144.1	MA0144.1	0.0561
MA0145.1	MA0145.1	0.702
MA0146.1	MA0146.1	0.329
MA0147.1	MA0147.1	0.214
MA0148.1	MA0148.1	0.147
MA0149.1	MA0149.1	0.36
MA0150.1	MA0150.1	0.526
MA0152.1	MA0152.1	0.0208
MA0153.1	MA0153.1	0.574
MA0154.1	MA0154.1	0.00789
MA0155.1	MA0155.1	0.773
MA0156.1	MA0156.1	1.68776e-31
MA0157.1	MA0157.1	0.00485
MA0159.1	MA0159.1	0.185
MA0160.1	MA0160.1	0.413
MA0162.1	MA0162.1	0.942
MA0163.1	MA0163.1	4.77974e-9
MA0164.1	MA0164.1	0.587
MA0258.1	MA0258.1	0.674
MA0259.1	MA0259.1	0.442

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12201

Novel motif	Logo	P-value
1	1	0.451
10	10	0.0303
100	100	0.704
101	101	0.349
102	102	0.694
103	103	0.103
104	104	0.541
105	105	0.125
106	106	0.74
107	107	0.0366
108	108	0.489
109	109	0.0743
11	11	0.151
110	110	0.592
111	111	0.472
112	112	0.444
113	113	0.18
114	114	0.336
115	115	0.28
116	116	0.369
117	117	0.00334
118	118	0.466
119	119	0.932
12	12	0.46
120	120	0.5
121	121	0.874
122	122	0.367
123	123	0.697
124	124	0.181
125	125	0.828
126	126	0.148
127	127	0.321
128	128	0.81
129	129	0.221
13	13	0.614
130	130	0.865
131	131	0.354
132	132	0.526
133	133	0.981
134	134	0.639
135	135	0.417
136	136	0.913
137	137	0.0264
138	138	0.218
139	139	0.0745
14	14	0.327
140	140	0.226
141	141	0.871
142	142	0.827
143	143	3.76691e-4
144	144	0.798
145	145	0.551
146	146	0.239
147	147	0.0127
148	148	0.242
149	149	0.921
15	15	0.133
150	150	0.996
151	151	0.435
152	152	0.33
153	153	0.882
154	154	0.816
155	155	0.0616
156	156	0.841
157	157	0.31
158	158	0.151
159	159	0.114
16	16	0.939
160	160	0.791
161	161	0.19
162	162	0.12
163	163	0.874
164	164	0.416
165	165	0.589
166	166	0.678
167	167	0.534
168	168	0.0274
169	169	0.993
17	17	0.885
18	18	0.818
19	19	0.228
2	2	0.666
20	20	0.959
21	21	0.736
22	22	0.855
23	23	0.653
24	24	0.599
25	25	0.0333
26	26	0.981
27	27	0.024
28	28	0.317
29	29	0.0529
3	3	0.0715
30	30	0.608
31	31	0.788
32	32	0.065
33	33	0.332
34	34	0.788
35	35	0.0922
36	36	0.0581
37	37	0.232
38	38	0.656
39	39	0.345
4	4	0.825
40	40	0.63
41	41	0.0364
42	42	0.0726
43	43	0.34
44	44	0.645
45	45	0.896
46	46	0.317
47	47	0.0964
48	48	0.254
49	49	0.265
5	5	0.103
50	50	0.522
51	51	0.579
52	52	0.204
53	53	0.312
54	54	0.638
55	55	0.435
56	56	0.729
57	57	0.857
58	58	0.0528
59	59	0.35
6	6	0.707
60	60	0.431
61	61	0.071
62	62	0.0347
63	63	0.938
64	64	0.285
65	65	0.89
66	66	0.909
67	67	0.886
68	68	0.698
69	69	0.694
7	7	0.179
70	70	0.0388
71	71	0.147
72	72	0.061
73	73	0.615
74	74	0.36
75	75	0.0252
76	76	0.279
77	77	0.436
78	78	0.389
79	79	0.511
8	8	0.682
80	80	6.56502e-4
81	81	0.46
82	82	0.187
83	83	0.836
84	84	0.758
85	85	0.669
86	86	0.14
87	87	0.377
88	88	0.652
89	89	0.727
9	9	0.378
90	90	0.0425
91	91	0.904
92	92	0.634
93	93	0.233
94	94	0.112
95	95	0.0115
96	96	0.187
97	97	0.53
98	98	0.171
99	99	0.0176

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12201

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
+|DRA_sample_Accession=CAGE@SAMD00005124
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000034,CL:0002032,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000542,CL:0000219,CL:0000004,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002420,CL:0002419,CL:0000790,CL:0000838,CL:0002031,CL:0000827,CL:0000037,CL:0000566,CL:0000625,CL:0000837,CL:0000051
+|accession_numbers=CAGE;DRX008067;DRR008939;DRZ000364;DRZ001749;DRZ011714;DRZ013099
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.07!116.85!TCF7;;chr4:109087445..109087463,-!p1@LEF1!2.03!107.36!LEF1;;chr2:68592406..68592424,+!p1@PLEK!1.91!79.96!PLEK;;chr17:45810594..45810608,+!p1@TBX21!1.88!74.08!TBX21;;chr2:192015701..192015743,-!p1@STAT4!1.85!93.36!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.82!65.80!IKZF1;;chr3:63953435..63953499,+!p1@ATXN7!1.81!63.39!ATXN7;;chr2:192015750..192015793,-!p2@STAT4!1.68!62.79!STAT4;;chr5:133450365..133450444,+!p1@TCF7!1.66!194.69!TCF7;;chr2:231090433..231090469,+!p1@SP140!1.65!43.37!SP140;;chr3:27763807..27763822,-!p1@EOMES!1.59!38.10!EOMES;;chrY:21906594..21906622,-!p1@KDM5D!1.57!35.99!KDM5D;;chr9:117150254..117150271,-!p1@AKNA!1.54!89.44!AKNA;;chr3:18486354..18486377,-!p2@SATB1!1.53!40.50!SATB1;;chr5:133451347..133451358,+!p3@TCF7!1.51!31.32!TCF7;;chr1:25256756..25256774,-!p1@RUNX3!1.49!54.66!RUNX3;;chr3:71355163..71355209,-!p5@FOXP1!1.49!40.81!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!1.46!862.19!KLF2;;chr3:71542615..71542644,-!p12@FOXP1!1.45!27.40!FOXP1;;chr6:106546808..106546833,+!p3@PRDM1!1.43!32.37!PRDM1;;chr11:47400078..47400106,-!p1@SPI1!1.42!25.45!SPI1;;chr7:50343895..50343936,+!p5@IKZF1!1.40!24.24!IKZF1;;chr15:60884706..60884743,-!p1@RORA!1.39!117.15!RORA;;chr17:37934365..37934387,-!p2@IKZF3!1.39!23.49!IKZF3;;chr2:68592394..68592405,+!p2@PLEK!1.39!23.34!PLEK;;chr20:50159198..50159299,-!p1@NFATC2!1.38!33.43!NFATC2;;chr14:75988771..75988826,+!p1@BATF!1.31!25.75!BATF;;chr17:38020392..38020477,-!p1@IKZF3!1.31!19.27!IKZF3;;chr19:19779619..19779670,+!p1@ZNF101!1.30!52.70!ZNF101;;chr9:3525727..3525828,-!p2@RFX3!1.29!46.23!RFX3;;chr14:99738059..99738086,-!p2@BCL11B!1.29!18.52!BCL11B;;chr4:57522166..57522260,-!p2@HOPX!1.28!20.93!HOPX;;chr16:85932760..85932775,+!p1@IRF8!1.27!17.62!IRF8;;chr4:109090075..109090095,-!p2@LEF1!1.26!17.17!LEF1;;chr4:57522598..57522664,-!p3@HOPX!1.26!17.01!HOPX;;chr7:50344289..50344323,+!p1@IKZF1!1.25!16.86!IKZF1;;chr1:26697243..26697258,-!p1@ZNF683!1.25!16.71!ZNF683;;chr8:67525443..67525459,-!p2@MYBL1!1.21!22.59!MYBL1;;chr3:71542684..71542720,-!p18@FOXP1!1.21!15.36!FOXP1;;chr3:18480217..18480239,-!p3@SATB1!1.21!15.06!SATB1;;chr13:41593425..41593480,-!p1@ELF1!1.19!92.00!ELF1;;chr2:231090471..231090504,+!p2@SP140!1.18!14.30!SP140;;chr11:128392085..128392232,-!p1@ETS1!1.17!458.50!ETS1;;chr10:8096772..8096787,+!p2@GATA3!1.17!16.11!GATA3;;chr4:57522674..57522699,-!p5@HOPX!1.17!13.85!HOPX;;chr20:56195474..56195506,-!p1@ZBP1!1.17!13.70!ZBP1;;chr6:391743..391759,+!p1@IRF4!1.16!13.40!IRF4;;chr11:128392273..128392308,-!p2@ETS1!1.13!53.00!ETS1;;chr10:8096631..8096660,+!p1@GATA3!1.12!14.91!GATA3;;chr11:128563948..128564003,+!p1@FLI1!1.10!139.13!FLI1;;chr6:91006518..91006570,-!p1@BACH2!1.09!26.20!BACH2;;chr6:106546731..106546755,+!p5@PRDM1!1.09!11.44!PRDM1;;chr7:50344251..50344288,+!p3@IKZF1!1.09!11.29!IKZF1;;chr17:38020557..38020572,-!p4@IKZF3!1.09!11.29!IKZF3;;chr16:88752889..88752921,-!p1@SNAI3!1.08!12.95!SNAI3;;chr4:109089901..109089930,-!p3@LEF1!1.07!10.69!LEF1;;chr14:64970670..64970712,-!p3@ZBTB25!1.06!22.89!ZBTB25;;chr4:57522513..57522548,-!p4@HOPX!1.06!10.54!HOPX;;chrX:106960285..106960299,-!p1@TSC22D3!1.05!277.06!TSC22D3;;chr7:50348268..50348366,+!p4@IKZF1!1.04!9.94!IKZF1;;chrX:49121165..49121179,-!p1@FOXP3!1.03!9.79!FOXP3;;chr1:26697189..26697205,-!p2@ZNF683!1.02!9.49!ZNF683;;chr17:38020481..38020506,-!p7@IKZF3!1.02!9.49!IKZF3;;chr16:3313791..3313834,+!p2@ZNF263!1.01!20.63!ZNF263;;chrX:101186981..101187030,-!p1@ZMAT1!1.00!30.12!ZMAT1;;chr16:68119324..68119364,+!p1@NFATC3!0.99!40.50!NFATC3;;chr9:114287433..114287513,+!p1@ZNF483!0.99!23.04!ZNF483;;chr12:54778471..54778528,-!p1@ZNF385A!0.99!8.88!ZNF385A;;chr17:37934280..37934299,-!p6@IKZF3!0.99!8.88!IKZF3;;chr3:18487057..18487105,-!p4@SATB1!0.99!8.73!SATB1;;chr6:45296048..45296082,+!p1@RUNX2!0.97!9.64!RUNX2;;chr6:106546786..106546802,+!p6@PRDM1!0.97!8.43!PRDM1;;chr3:71542651..71542683,-!p22@FOXP1!0.97!8.28!FOXP1;;chr17:37934204..37934241,-!p3@IKZF3!0.97!8.28!IKZF3;;chr4:38665769..38665801,+!p2@KLF3!0.96!75.59!KLF3;;chr21:36421535..36421610,-!p2@RUNX1!0.96!29.51!RUNX1;;chr14:75988831..75988847,+!p2@BATF!0.96!8.13!BATF;;chr2:178128250..178128293,-!p6@NFE2L2!0.95!20.33!NFE2L2;;chr19:38085768..38085821,+!p1@ZNF540!0.95!11.90!ZNF540;;chr4:109088940..109089037,-!p4@LEF1!0.95!7.98!LEF1;;chr1:25291475..25291511,-!p2@RUNX3!0.95!7.83!RUNX3;;chr21:36421347..36421380,-!p8@RUNX1!0.95!7.83!RUNX1;;chr19:19729477..19729542,-!p1@PBX4!0.93!16.56!PBX4;;chr13:74707894..74707947,-!p6@KLF12!0.93!8.43!KLF12;;chr3:18466787..18466839,-!p1@SATB1!0.92!34.18!SATB1;;chr4:109088089..109088101,-!p11@LEF1!0.92!7.23!LEF1;;chr20:51588873..51588953,+!p1@TSHZ2!0.91!9.64!TSHZ2;;chr1:92951607..92951661,-!p1@GFI1!0.91!7.08!GFI1;;chr20:56195525..56195556,-!p2@ZBP1!0.91!7.08!ZBP1;;chr2:145277640..145277771,-!p1@ZEB2!0.90!97.27!ZEB2;;chr6:143266297..143266356,-!p1@HIVEP2!0.90!34.78!HIVEP2;;chr8:60031619..60031676,-!p1@TOX!0.90!15.66!TOX;;chr4:109088130..109088163,-!p13@LEF1!0.90!6.93!LEF1;;chr3:71179699.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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
+|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12201.12148-128F6.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12201.12148-128F6.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12201.12148-128F6.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12201.12148-128F6.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12201.12148-128F6.hg38.nobarcode.ctss.bed.gz
 |id=FF:12148-128F6
-|is_a=EFO:0002091;;FF:0000002;;FF:0000030;;FF:0000210
+|is_a=EFO:0002091;;FF:0000030;;FF:0000210
+|is_obsolete=
+|library_id=CNhs12201
+|library_id_phase_based=2:CNhs12201
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12148
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12148
 |name=CD8+ T Cells (pluriselect), donor090325, donation1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12201,LSID976,release010,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=128
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=4.42287
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.26236556556513e-222!GO:0043227;membrane-bound organelle;1.60797398746054e-194!GO:0043231;intracellular membrane-bound organelle;3.48565792127772e-194!GO:0043226;organelle;1.05173623101214e-180!GO:0043229;intracellular organelle;4.46740876153793e-180!GO:0005737;cytoplasm;1.56818185458477e-132!GO:0044422;organelle part;2.15886302625099e-106!GO:0005634;nucleus;6.28346346059124e-105!GO:0044446;intracellular organelle part;6.28346346059124e-105!GO:0043170;macromolecule metabolic process;3.4608915946309e-98!GO:0044237;cellular metabolic process;1.19464276928971e-94!GO:0044444;cytoplasmic part;2.46389770044254e-91!GO:0044238;primary metabolic process;4.62564327280459e-91!GO:0032991;macromolecular complex;5.36245966465721e-88!GO:0030529;ribonucleoprotein complex;2.93819718375137e-85!GO:0003723;RNA binding;5.15426944022961e-84!GO:0044428;nuclear part;1.66645322896103e-78!GO:0043283;biopolymer metabolic process;1.29187466045811e-67!GO:0043233;organelle lumen;9.4541951572675e-66!GO:0031974;membrane-enclosed lumen;9.4541951572675e-66!GO:0010467;gene expression;9.98548826979396e-66!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.68483605372228e-57!GO:0006396;RNA processing;2.01453823503056e-56!GO:0005515;protein binding;2.79902115085607e-55!GO:0006412;translation;7.82154665766087e-53!GO:0033036;macromolecule localization;1.47489629980615e-48!GO:0005739;mitochondrion;5.56341865036554e-48!GO:0031981;nuclear lumen;6.92075896556322e-48!GO:0019538;protein metabolic process;3.01262377068857e-47!GO:0016071;mRNA metabolic process;4.86708144468968e-47!GO:0015031;protein transport;4.69032104259263e-46!GO:0003676;nucleic acid binding;1.83732611362287e-45!GO:0044267;cellular protein metabolic process;2.67999235898103e-45!GO:0005840;ribosome;3.77041620749394e-45!GO:0044260;cellular macromolecule metabolic process;1.51484882197896e-44!GO:0045184;establishment of protein localization;1.53315806626377e-44!GO:0008104;protein localization;1.74504827018837e-44!GO:0008380;RNA splicing;2.1693681115116e-41!GO:0043234;protein complex;2.56613480071336e-41!GO:0006397;mRNA processing;1.66331999137111e-40!GO:0003735;structural constituent of ribosome;1.57450247126451e-39!GO:0009059;macromolecule biosynthetic process;3.33826754116915e-39!GO:0016070;RNA metabolic process;1.49472468257759e-36!GO:0031090;organelle membrane;6.98325392347654e-36!GO:0033279;ribosomal subunit;1.63417276636546e-35!GO:0031967;organelle envelope;7.82818410786152e-35!GO:0044429;mitochondrial part;1.02738495805893e-34!GO:0031975;envelope;1.72552362466318e-34!GO:0005829;cytosol;2.9492591465971e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.2739583109403e-31!GO:0046907;intracellular transport;2.79434693009207e-31!GO:0005654;nucleoplasm;4.47558145101236e-30!GO:0006886;intracellular protein transport;5.305594592094e-30!GO:0005681;spliceosome;5.98100833469541e-30!GO:0044249;cellular biosynthetic process;7.40483690216275e-30!GO:0016043;cellular component organization and biogenesis;2.79424190680259e-29!GO:0009058;biosynthetic process;6.87839670908979e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.86124572208812e-28!GO:0006259;DNA metabolic process;6.25127600199498e-28!GO:0065003;macromolecular complex assembly;3.81542149464748e-26!GO:0044445;cytosolic part;2.97008487368783e-25!GO:0044451;nucleoplasm part;3.12964758397868e-24!GO:0000166;nucleotide binding;8.92697329044173e-24!GO:0006512;ubiquitin cycle;3.38376005448218e-23!GO:0051649;establishment of cellular localization;6.05163747335219e-23!GO:0051641;cellular localization;6.05480008821257e-23!GO:0022607;cellular component assembly;8.386787431065e-23!GO:0005740;mitochondrial envelope;6.9437581212299e-22!GO:0006996;organelle organization and biogenesis;2.91427734453471e-21!GO:0031966;mitochondrial membrane;6.39403312945632e-21!GO:0019866;organelle inner membrane;6.62380073871164e-21!GO:0012501;programmed cell death;1.01712181625538e-20!GO:0006915;apoptosis;1.16490910291713e-20!GO:0022618;protein-RNA complex assembly;3.82454739133056e-20!GO:0008219;cell death;8.75072263660234e-20!GO:0016265;death;8.75072263660234e-20!GO:0005730;nucleolus;4.79151873163141e-19!GO:0005743;mitochondrial inner membrane;5.0746170703563e-19!GO:0006119;oxidative phosphorylation;6.49464903320335e-19!GO:0044265;cellular macromolecule catabolic process;6.70198487375699e-19!GO:0016874;ligase activity;7.60006283307945e-19!GO:0015935;small ribosomal subunit;1.17866911061257e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.6706501487619e-18!GO:0016604;nuclear body;2.9079610188172e-18!GO:0019941;modification-dependent protein catabolic process;4.21782426143013e-18!GO:0043632;modification-dependent macromolecule catabolic process;4.21782426143013e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.59969654582068e-18!GO:0006511;ubiquitin-dependent protein catabolic process;5.83445685297146e-18!GO:0016462;pyrophosphatase activity;6.87669439118102e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;7.36701418869065e-18!GO:0043412;biopolymer modification;7.63416945579647e-18!GO:0044257;cellular protein catabolic process;8.09267545122974e-18!GO:0015934;large ribosomal subunit;8.7017242703928e-18!GO:0017111;nucleoside-triphosphatase activity;1.08458209858372e-17!GO:0043285;biopolymer catabolic process;1.04646868818965e-16!GO:0006605;protein targeting;1.10089653160215e-16!GO:0050794;regulation of cellular process;1.22222300900613e-16!GO:0044455;mitochondrial membrane part;1.77856077482081e-16!GO:0032553;ribonucleotide binding;1.98689748665397e-16!GO:0032555;purine ribonucleotide binding;1.98689748665397e-16!GO:0043228;non-membrane-bound organelle;3.2499139237526e-16!GO:0043232;intracellular non-membrane-bound organelle;3.2499139237526e-16!GO:0017076;purine nucleotide binding;4.20606201088393e-16!GO:0008135;translation factor activity, nucleic acid binding;5.31545992121086e-16!GO:0008134;transcription factor binding;1.2060149936764e-15!GO:0031980;mitochondrial lumen;1.60872166365883e-15!GO:0005759;mitochondrial matrix;1.60872166365883e-15!GO:0006457;protein folding;2.0920786039887e-15!GO:0006464;protein modification process;2.21683030053276e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.12335461015259e-15!GO:0006913;nucleocytoplasmic transport;3.67278197989262e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.91644583609025e-15!GO:0000375;RNA splicing, via transesterification reactions;4.91644583609025e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.91644583609025e-15!GO:0006974;response to DNA damage stimulus;5.19591232741853e-15!GO:0016607;nuclear speck;6.4391821388802e-15!GO:0051169;nuclear transport;6.7448326009787e-15!GO:0009057;macromolecule catabolic process;1.23810060671412e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.75451599109231e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.04482535903112e-14!GO:0042981;regulation of apoptosis;4.7086139982794e-14!GO:0043687;post-translational protein modification;6.7141476224275e-14!GO:0005524;ATP binding;6.7141476224275e-14!GO:0043067;regulation of programmed cell death;7.03296910548058e-14!GO:0012505;endomembrane system;9.58619481450662e-14!GO:0019222;regulation of metabolic process;1.07986570553158e-13!GO:0005635;nuclear envelope;1.22842041928361e-13!GO:0032559;adenyl ribonucleotide binding;1.77440669319969e-13!GO:0005746;mitochondrial respiratory chain;1.93345953565204e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;2.02923987817334e-13!GO:0006281;DNA repair;2.11732872116075e-13!GO:0051276;chromosome organization and biogenesis;2.15654280764478e-13!GO:0030554;adenyl nucleotide binding;5.13267848266454e-13!GO:0030163;protein catabolic process;6.18312232653124e-13!GO:0006323;DNA packaging;8.09624148011526e-13!GO:0016887;ATPase activity;9.1659892764573e-13!GO:0042623;ATPase activity, coupled;9.7369877400148e-13!GO:0006413;translational initiation;1.67058222282071e-12!GO:0042254;ribosome biogenesis and assembly;2.05999930440696e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.26997492381138e-12!GO:0050136;NADH dehydrogenase (quinone) activity;2.55517426323026e-12!GO:0003954;NADH dehydrogenase activity;2.55517426323026e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.55517426323026e-12!GO:0031965;nuclear membrane;2.72205612290617e-12!GO:0004386;helicase activity;3.27337163562098e-12!GO:0044248;cellular catabolic process;3.72755328351011e-12!GO:0048193;Golgi vesicle transport;3.76948788056107e-12!GO:0003743;translation initiation factor activity;4.13624875705596e-12!GO:0048770;pigment granule;6.27030614074285e-12!GO:0042470;melanosome;6.27030614074285e-12!GO:0007049;cell cycle;2.15254150937234e-11!GO:0031323;regulation of cellular metabolic process;2.15767893210429e-11!GO:0016192;vesicle-mediated transport;2.80879658829731e-11!GO:0008026;ATP-dependent helicase activity;2.92691624760192e-11!GO:0050789;regulation of biological process;3.35727580605815e-11!GO:0016568;chromatin modification;3.75750113587497e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.79821282079631e-11!GO:0042773;ATP synthesis coupled electron transport;4.79821282079631e-11!GO:0006446;regulation of translational initiation;7.63977939706618e-11!GO:0008639;small protein conjugating enzyme activity;8.08658028667047e-11!GO:0017038;protein import;9.23471912615037e-11!GO:0005761;mitochondrial ribosome;1.320599918901e-10!GO:0000313;organellar ribosome;1.320599918901e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.45519627637274e-10!GO:0045271;respiratory chain complex I;1.45519627637274e-10!GO:0005747;mitochondrial respiratory chain complex I;1.45519627637274e-10!GO:0004842;ubiquitin-protein ligase activity;1.48034486545745e-10!GO:0051082;unfolded protein binding;1.79987755075616e-10!GO:0005794;Golgi apparatus;1.8618257436705e-10!GO:0006350;transcription;2.7545611694293e-10!GO:0044453;nuclear membrane part;2.75690674367705e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.31179448860156e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.41326200002882e-10!GO:0005694;chromosome;4.48121836630071e-10!GO:0019787;small conjugating protein ligase activity;5.68258405818429e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.18380056477611e-10!GO:0050657;nucleic acid transport;7.94376308511454e-10!GO:0051236;establishment of RNA localization;7.94376308511454e-10!GO:0050658;RNA transport;7.94376308511454e-10!GO:0003712;transcription cofactor activity;8.51469934762544e-10!GO:0006403;RNA localization;9.74283053918172e-10!GO:0010468;regulation of gene expression;1.09441295550626e-09!GO:0008270;zinc ion binding;1.19193568349009e-09!GO:0051186;cofactor metabolic process;2.06809834788315e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.33392759687025e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.58050488991746e-09!GO:0005643;nuclear pore;3.06685095016032e-09!GO:0016072;rRNA metabolic process;5.22333636877928e-09!GO:0043566;structure-specific DNA binding;5.79966942017121e-09!GO:0019829;cation-transporting ATPase activity;6.53885383151113e-09!GO:0006399;tRNA metabolic process;6.57784307102201e-09!GO:0006364;rRNA processing;6.67163456777835e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.29882200239856e-09!GO:0051246;regulation of protein metabolic process;8.74053842756221e-09!GO:0005768;endosome;8.99675364519031e-09!GO:0007243;protein kinase cascade;9.9098538075561e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.13366590908766e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.37578099307039e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.38681790938867e-08!GO:0009719;response to endogenous stimulus;1.58664047234576e-08!GO:0044427;chromosomal part;1.64747387844659e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.10430207842314e-08!GO:0051028;mRNA transport;2.52378826370868e-08!GO:0008565;protein transporter activity;2.79282052973601e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.72986706137934e-08!GO:0048523;negative regulation of cellular process;3.90760975411481e-08!GO:0016881;acid-amino acid ligase activity;4.1518615616604e-08!GO:0022402;cell cycle process;5.51940434353814e-08!GO:0009259;ribonucleotide metabolic process;6.06283576481885e-08!GO:0006333;chromatin assembly or disassembly;6.74768211226522e-08!GO:0051170;nuclear import;7.41311393630226e-08!GO:0065002;intracellular protein transport across a membrane;7.7129541673156e-08!GO:0006793;phosphorus metabolic process;9.25575570326285e-08!GO:0006796;phosphate metabolic process;9.25575570326285e-08!GO:0006606;protein import into nucleus;1.02125764416731e-07!GO:0051726;regulation of cell cycle;1.02739686497897e-07!GO:0032774;RNA biosynthetic process;1.06797838937587e-07!GO:0003697;single-stranded DNA binding;1.18150138900672e-07!GO:0000074;regulation of progression through cell cycle;1.2048445094101e-07!GO:0009260;ribonucleotide biosynthetic process;1.22837196846916e-07!GO:0006366;transcription from RNA polymerase II promoter;1.31671066568686e-07!GO:0006351;transcription, DNA-dependent;1.42096050629878e-07!GO:0006164;purine nucleotide biosynthetic process;1.50188534031652e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.55856316938408e-07!GO:0016787;hydrolase activity;1.94674593268812e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.17612666573499e-07!GO:0015986;ATP synthesis coupled proton transport;2.25735033725409e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.25735033725409e-07!GO:0006163;purine nucleotide metabolic process;2.26447700408661e-07!GO:0000245;spliceosome assembly;2.30594125830644e-07!GO:0006732;coenzyme metabolic process;2.32605315986792e-07!GO:0045449;regulation of transcription;2.46004142826437e-07!GO:0046930;pore complex;2.54719255835664e-07!GO:0005783;endoplasmic reticulum;2.68806661784259e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.71795341959643e-07!GO:0065004;protein-DNA complex assembly;2.97704772943767e-07!GO:0065007;biological regulation;3.00039593488648e-07!GO:0044432;endoplasmic reticulum part;3.45988984912756e-07!GO:0009150;purine ribonucleotide metabolic process;3.48978360087575e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.68800751600094e-07!GO:0032446;protein modification by small protein conjugation;3.69293490247828e-07!GO:0004298;threonine endopeptidase activity;4.38809064046254e-07!GO:0003713;transcription coactivator activity;4.47887174050771e-07!GO:0065009;regulation of a molecular function;5.01175009376335e-07!GO:0006916;anti-apoptosis;5.71069468616331e-07!GO:0009060;aerobic respiration;6.4257506031009e-07!GO:0043069;negative regulation of programmed cell death;6.79517910123579e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.86568687193645e-07!GO:0016310;phosphorylation;7.40745374909076e-07!GO:0015078;hydrogen ion transmembrane transporter activity;8.03108410137013e-07!GO:0016779;nucleotidyltransferase activity;8.23187865948137e-07!GO:0006917;induction of apoptosis;9.97514416172397e-07!GO:0043065;positive regulation of apoptosis;1.00233182955418e-06!GO:0000151;ubiquitin ligase complex;1.06786923453292e-06!GO:0046914;transition metal ion binding;1.07462331150229e-06!GO:0016567;protein ubiquitination;1.1242533789391e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.1491067576785e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.1491067576785e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.1491067576785e-06!GO:0043066;negative regulation of apoptosis;1.18313348091238e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.35548583081849e-06!GO:0048519;negative regulation of biological process;1.58485768735858e-06!GO:0012502;induction of programmed cell death;1.6343971882849e-06!GO:0043068;positive regulation of programmed cell death;1.65959555463715e-06!GO:0000785;chromatin;1.85686924416248e-06!GO:0043038;amino acid activation;2.07513799241663e-06!GO:0006418;tRNA aminoacylation for protein translation;2.07513799241663e-06!GO:0043039;tRNA aminoacylation;2.07513799241663e-06!GO:0009615;response to virus;2.08804896454821e-06!GO:0006754;ATP biosynthetic process;2.59514099182222e-06!GO:0006753;nucleoside phosphate metabolic process;2.59514099182222e-06!GO:0016563;transcription activator activity;2.65801663679256e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.74462093758896e-06!GO:0009056;catabolic process;3.03114274862287e-06!GO:0051168;nuclear export;3.03114274862287e-06!GO:0005773;vacuole;3.2528748826419e-06!GO:0031324;negative regulation of cellular metabolic process;3.28638936882417e-06!GO:0006260;DNA replication;3.35058010582e-06!GO:0007242;intracellular signaling cascade;3.66065681707012e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.66065681707012e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.66065681707012e-06!GO:0003724;RNA helicase activity;3.76578450384731e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.09097550513379e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.09097550513379e-06!GO:0005789;endoplasmic reticulum membrane;4.31381568897678e-06!GO:0009055;electron carrier activity;4.4386581392587e-06!GO:0006613;cotranslational protein targeting to membrane;4.64492563084347e-06!GO:0045333;cellular respiration;4.71269345904417e-06!GO:0006417;regulation of translation;4.77247631149932e-06!GO:0009199;ribonucleoside triphosphate metabolic process;5.27110661687165e-06!GO:0006355;regulation of transcription, DNA-dependent;5.80909699725433e-06!GO:0051188;cofactor biosynthetic process;5.83713611204579e-06!GO:0046034;ATP metabolic process;5.8766995478228e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.9616581426947e-06!GO:0009144;purine nucleoside triphosphate metabolic process;5.9616581426947e-06!GO:0005793;ER-Golgi intermediate compartment;7.00832052775583e-06!GO:0045259;proton-transporting ATP synthase complex;7.04610342621058e-06!GO:0000323;lytic vacuole;7.51932634180173e-06!GO:0005764;lysosome;7.51932634180173e-06!GO:0009141;nucleoside triphosphate metabolic process;8.47940180009248e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.31728281678607e-06!GO:0030120;vesicle coat;9.43902327433103e-06!GO:0030662;coated vesicle membrane;9.43902327433103e-06!GO:0005770;late endosome;9.48990452471145e-06!GO:0006401;RNA catabolic process;9.65276181547116e-06!GO:0016564;transcription repressor activity;1.39389590670554e-05!GO:0006461;protein complex assembly;1.41071269839923e-05!GO:0003677;DNA binding;1.41488836530495e-05!GO:0045786;negative regulation of progression through cell cycle;1.8240050707119e-05!GO:0048475;coated membrane;1.88879434447128e-05!GO:0030117;membrane coat;1.88879434447128e-05!GO:0016481;negative regulation of transcription;1.91246151977039e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.0504874563911e-05!GO:0009892;negative regulation of metabolic process;2.2758853237565e-05!GO:0006099;tricarboxylic acid cycle;2.33926465809461e-05!GO:0046356;acetyl-CoA catabolic process;2.33926465809461e-05!GO:0044440;endosomal part;2.37087973567907e-05!GO:0010008;endosome membrane;2.37087973567907e-05!GO:0001772;immunological synapse;2.44137321704248e-05!GO:0008234;cysteine-type peptidase activity;2.48826510013894e-05!GO:0016740;transferase activity;2.64904739325181e-05!GO:0019899;enzyme binding;2.9819436943825e-05!GO:0006612;protein targeting to membrane;3.02400982381806e-05!GO:0031326;regulation of cellular biosynthetic process;3.46429511401617e-05!GO:0005813;centrosome;3.70444494697889e-05!GO:0003690;double-stranded DNA binding;3.79673619537461e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.87642911817158e-05!GO:0008632;apoptotic program;3.97956935786339e-05!GO:0009108;coenzyme biosynthetic process;5.0260081213125e-05!GO:0016363;nuclear matrix;5.07385393800675e-05!GO:0009967;positive regulation of signal transduction;5.29739646960317e-05!GO:0043623;cellular protein complex assembly;5.43004949377883e-05!GO:0006084;acetyl-CoA metabolic process;5.97540408640762e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.5137379645973e-05!GO:0005525;GTP binding;6.57102868290272e-05!GO:0006402;mRNA catabolic process;6.8481978605258e-05!GO:0007005;mitochondrion organization and biogenesis;8.00934988963895e-05!GO:0006310;DNA recombination;8.00934988963895e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.09493939422307e-05!GO:0015399;primary active transmembrane transporter activity;9.09493939422307e-05!GO:0042110;T cell activation;9.44092250036568e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.95315830878094e-05!GO:0044431;Golgi apparatus part;0.000106213377678843!GO:0008186;RNA-dependent ATPase activity;0.000109161332434718!GO:0046649;lymphocyte activation;0.0001163879206158!GO:0042101;T cell receptor complex;0.000131408862658365!GO:0048522;positive regulation of cellular process;0.00014336882822759!GO:0003924;GTPase activity;0.000150503147018373!GO:0005815;microtubule organizing center;0.000155950752498409!GO:0009889;regulation of biosynthetic process;0.000180471193038157!GO:0009109;coenzyme catabolic process;0.000211396859924435!GO:0045321;leukocyte activation;0.000226332890674504!GO:0003899;DNA-directed RNA polymerase activity;0.000236517472600631!GO:0005885;Arp2/3 protein complex;0.000244588316388566!GO:0060090;molecular adaptor activity;0.000248649191703058!GO:0007264;small GTPase mediated signal transduction;0.000271632323542794!GO:0051187;cofactor catabolic process;0.000280837760523405!GO:0000278;mitotic cell cycle;0.000311519118142337!GO:0004004;ATP-dependent RNA helicase activity;0.000338608822847671!GO:0008654;phospholipid biosynthetic process;0.000353238631338067!GO:0006752;group transfer coenzyme metabolic process;0.000367739910815659!GO:0031497;chromatin assembly;0.000367739910815659!GO:0050790;regulation of catalytic activity;0.000386840114245992!GO:0006334;nucleosome assembly;0.000396900784859158!GO:0030384;phosphoinositide metabolic process;0.000437130799857434!GO:0043021;ribonucleoprotein binding;0.000440177492461055!GO:0005762;mitochondrial large ribosomal subunit;0.000451890273852316!GO:0000315;organellar large ribosomal subunit;0.000451890273852316!GO:0006891;intra-Golgi vesicle-mediated transport;0.000497373714805353!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000528936021501355!GO:0003729;mRNA binding;0.000535364390946071!GO:0044452;nucleolar part;0.000584760941888167!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000607015177400128!GO:0005798;Golgi-associated vesicle;0.000621614946661807!GO:0016197;endosome transport;0.000624314316223508!GO:0005774;vacuolar membrane;0.00064754350781534!GO:0002376;immune system process;0.000667617107169029!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000683931594540879!GO:0006261;DNA-dependent DNA replication;0.00069047475511943!GO:0051427;hormone receptor binding;0.000743964217174986!GO:0032561;guanyl ribonucleotide binding;0.000743964217174986!GO:0019001;guanyl nucleotide binding;0.000743964217174986!GO:0019783;small conjugating protein-specific protease activity;0.000787861470551598!GO:0031072;heat shock protein binding;0.000807762034520405!GO:0043492;ATPase activity, coupled to movement of substances;0.000840963983078152!GO:0005667;transcription factor complex;0.000842017985895025!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000858635022888918!GO:0004843;ubiquitin-specific protease activity;0.000882563954544133!GO:0032940;secretion by cell;0.00089087805301152!GO:0008047;enzyme activator activity;0.000891177511073002!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000906801883405399!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000979696846249603!GO:0007265;Ras protein signal transduction;0.00100795790178388!GO:0009117;nucleotide metabolic process;0.00101008288309262!GO:0006611;protein export from nucleus;0.0010118089261426!GO:0004674;protein serine/threonine kinase activity;0.00112339144247983!GO:0008033;tRNA processing;0.00116059978333416!GO:0019843;rRNA binding;0.00117103449756212!GO:0043681;protein import into mitochondrion;0.00119775989388259!GO:0005769;early endosome;0.00119812829648473!GO:0000139;Golgi membrane;0.00119877508185934!GO:0005765;lysosomal membrane;0.00119877508185934!GO:0048500;signal recognition particle;0.00122787708934648!GO:0006383;transcription from RNA polymerase III promoter;0.00125129461237115!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00125459951581051!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00130694475757474!GO:0046489;phosphoinositide biosynthetic process;0.00130800784021159!GO:0006650;glycerophospholipid metabolic process;0.00134644494848815!GO:0051252;regulation of RNA metabolic process;0.00136422944935608!GO:0006818;hydrogen transport;0.00137441235541359!GO:0015992;proton transport;0.00139687069749273!GO:0035257;nuclear hormone receptor binding;0.00140659869578574!GO:0006352;transcription initiation;0.00140871506165443!GO:0045892;negative regulation of transcription, DNA-dependent;0.00141187281863854!GO:0004518;nuclease activity;0.00142044321562098!GO:0031902;late endosome membrane;0.0014337675923408!GO:0048518;positive regulation of biological process;0.00147710204200446!GO:0016251;general RNA polymerase II transcription factor activity;0.00152633299252009!GO:0004221;ubiquitin thiolesterase activity;0.00158112939027653!GO:0048471;perinuclear region of cytoplasm;0.00165154847532713!GO:0030695;GTPase regulator activity;0.00175620773071363!GO:0044437;vacuolar part;0.00180934334321792!GO:0045045;secretory pathway;0.00181137967506122!GO:0031252;leading edge;0.00183044677507315!GO:0003714;transcription corepressor activity;0.00186912114264362!GO:0000314;organellar small ribosomal subunit;0.00200839446159501!GO:0005763;mitochondrial small ribosomal subunit;0.00200839446159501!GO:0008168;methyltransferase activity;0.00211716083705251!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00220930336552826!GO:0003725;double-stranded RNA binding;0.00221940917296218!GO:0006414;translational elongation;0.00223865431739265!GO:0007034;vacuolar transport;0.00230659775593904!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0023304559176361!GO:0045047;protein targeting to ER;0.0023304559176361!GO:0022415;viral reproductive process;0.00236063017412563!GO:0016741;transferase activity, transferring one-carbon groups;0.0024127917776269!GO:0005070;SH3/SH2 adaptor activity;0.00244523643900192!GO:0008312;7S RNA binding;0.00246646363241343!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00258364134587886!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00258364134587886!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00258364134587886!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00260917796489436!GO:0005684;U2-dependent spliceosome;0.00294418901756142!GO:0003746;translation elongation factor activity;0.00294418901756142!GO:0051251;positive regulation of lymphocyte activation;0.00305386239282679!GO:0005083;small GTPase regulator activity;0.00305386239282679!GO:0015631;tubulin binding;0.00313036691620465!GO:0008624;induction of apoptosis by extracellular signals;0.00313287929141065!GO:0004527;exonuclease activity;0.00316374200343327!GO:0016859;cis-trans isomerase activity;0.00361024678481858!GO:0006607;NLS-bearing substrate import into nucleus;0.00369625561662167!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00381450533580365!GO:0051092;activation of NF-kappaB transcription factor;0.00422817331071619!GO:0032200;telomere organization and biogenesis;0.00445631981191234!GO:0000723;telomere maintenance;0.00445631981191234!GO:0030658;transport vesicle membrane;0.00453000164970964!GO:0032259;methylation;0.00459916234947598!GO:0006302;double-strand break repair;0.00466077644663835!GO:0019867;outer membrane;0.0046637886992085!GO:0009966;regulation of signal transduction;0.00469573710328414!GO:0043488;regulation of mRNA stability;0.00476119461045934!GO:0043487;regulation of RNA stability;0.00476119461045934!GO:0046474;glycerophospholipid biosynthetic process;0.00476119461045934!GO:0051336;regulation of hydrolase activity;0.0048560449748282!GO:0051090;regulation of transcription factor activity;0.0048560449748282!GO:0006405;RNA export from nucleus;0.00486637875682505!GO:0003711;transcription elongation regulator activity;0.00487935974961689!GO:0000087;M phase of mitotic cell cycle;0.00493639196930729!GO:0005741;mitochondrial outer membrane;0.00507975737965458!GO:0006338;chromatin remodeling;0.00510695943041109!GO:0006950;response to stress;0.00510695943041109!GO:0002757;immune response-activating signal transduction;0.00514274458938768!GO:0003684;damaged DNA binding;0.0052770707007077!GO:0047485;protein N-terminus binding;0.00536105780714821!GO:0042802;identical protein binding;0.00543194397074712!GO:0031968;organelle outer membrane;0.0056488387157156!GO:0022411;cellular component disassembly;0.00569647331905282!GO:0006497;protein amino acid lipidation;0.00584162260157496!GO:0031625;ubiquitin protein ligase binding;0.00599213252259342!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0063132395599473!GO:0051301;cell division;0.0064182711667813!GO:0051087;chaperone binding;0.0066387166996583!GO:0051098;regulation of binding;0.00696032554250598!GO:0007006;mitochondrial membrane organization and biogenesis;0.00702018131479109!GO:0043087;regulation of GTPase activity;0.00702123246259403!GO:0006289;nucleotide-excision repair;0.00711402534812707!GO:0007067;mitosis;0.00739710262745606!GO:0000049;tRNA binding;0.00742899264240965!GO:0030118;clathrin coat;0.00748040096881298!GO:0008017;microtubule binding;0.0074917672861806!GO:0043414;biopolymer methylation;0.00755152800135429!GO:0016853;isomerase activity;0.00777154171765879!GO:0005096;GTPase activator activity;0.00777154171765879!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00803365046957126!GO:0001775;cell activation;0.0082471277863099!GO:0007050;cell cycle arrest;0.00845271581855646!GO:0016790;thiolester hydrolase activity;0.00847574687847555!GO:0002764;immune response-regulating signal transduction;0.00868646637013821!GO:0016605;PML body;0.00909057574086454!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00914993248153272!GO:0046822;regulation of nucleocytoplasmic transport;0.00925174441708654!GO:0051539;4 iron, 4 sulfur cluster binding;0.00931422795045787!GO:0003678;DNA helicase activity;0.00935589911983455!GO:0006376;mRNA splice site selection;0.00946949466978913!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00946949466978913!GO:0003682;chromatin binding;0.00963866145942031!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00964480807443385!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00964480807443385!GO:0051920;peroxiredoxin activity;0.00966051471300831!GO:0042287;MHC protein binding;0.00970320180340788!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00977434903323132!GO:0022403;cell cycle phase;0.0100169533902039!GO:0005669;transcription factor TFIID complex;0.0100872811308471!GO:0001819;positive regulation of cytokine production;0.010113593080726!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0107717335219647!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0108260594988305!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0110220066920081!GO:0005637;nuclear inner membrane;0.0111805937500922!GO:0022890;inorganic cation transmembrane transporter activity;0.0112244978197007!GO:0030660;Golgi-associated vesicle membrane;0.0114090877041234!GO:0016584;nucleosome positioning;0.011892429882628!GO:0004532;exoribonuclease activity;0.0121385979112829!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0121385979112829!GO:0000781;chromosome, telomeric region;0.0121610223799946!GO:0031982;vesicle;0.0122006959258543!GO:0008097;5S rRNA binding;0.0126150533949556!GO:0006626;protein targeting to mitochondrion;0.0127695174262459!GO:0051249;regulation of lymphocyte activation;0.0130529864540668!GO:0000209;protein polyubiquitination;0.0137246751547859!GO:0050865;regulation of cell activation;0.0137431496146408!GO:0018193;peptidyl-amino acid modification;0.0137431496146408!GO:0015630;microtubule cytoskeleton;0.0138034458424619!GO:0030663;COPI coated vesicle membrane;0.013813422043529!GO:0030126;COPI vesicle coat;0.013813422043529!GO:0031124;mRNA 3'-end processing;0.013813422043529!GO:0022406;membrane docking;0.0140841177556292!GO:0048278;vesicle docking;0.0140841177556292!GO:0051789;response to protein stimulus;0.0140884384687403!GO:0006986;response to unfolded protein;0.0140884384687403!GO:0046966;thyroid hormone receptor binding;0.0145359963298782!GO:0006506;GPI anchor biosynthetic process;0.0146152221295462!GO:0050870;positive regulation of T cell activation;0.0149886458987989!GO:0046467;membrane lipid biosynthetic process;0.0150026023576804!GO:0016272;prefoldin complex;0.0155887198225372!GO:0008287;protein serine/threonine phosphatase complex;0.0160168701835516!GO:0006904;vesicle docking during exocytosis;0.0166855225726849!GO:0045454;cell redox homeostasis;0.0168295431628993!GO:0008408;3'-5' exonuclease activity;0.0172132377567181!GO:0004197;cysteine-type endopeptidase activity;0.0172925927010996!GO:0030137;COPI-coated vesicle;0.0174862063817908!GO:0015980;energy derivation by oxidation of organic compounds;0.0175352413622208!GO:0033116;ER-Golgi intermediate compartment membrane;0.0175352413622208!GO:0051540;metal cluster binding;0.0175352413622208!GO:0051536;iron-sulfur cluster binding;0.0175352413622208!GO:0030521;androgen receptor signaling pathway;0.0175769540552616!GO:0043621;protein self-association;0.0177114341514644!GO:0009165;nucleotide biosynthetic process;0.0178444625915822!GO:0005869;dynactin complex;0.0179944909594158!GO:0009112;nucleobase metabolic process;0.0181971104753712!GO:0051052;regulation of DNA metabolic process;0.0185398868806087!GO:0030518;steroid hormone receptor signaling pathway;0.0185643267368981!GO:0016044;membrane organization and biogenesis;0.0185643267368981!GO:0005657;replication fork;0.0187292071964417!GO:0000059;protein import into nucleus, docking;0.0187890951463246!GO:0042158;lipoprotein biosynthetic process;0.0188419801852045!GO:0006505;GPI anchor metabolic process;0.0189796254690529!GO:0000738;DNA catabolic process, exonucleolytic;0.0190182684590755!GO:0019079;viral genome replication;0.0192928908300059!GO:0030867;rough endoplasmic reticulum membrane;0.0195014637022739!GO:0005048;signal sequence binding;0.0197652849546241!GO:0005521;lamin binding;0.0199524688856997!GO:0031123;RNA 3'-end processing;0.0199524688856997!GO:0030258;lipid modification;0.0209001512693415!GO:0004722;protein serine/threonine phosphatase activity;0.021633283738057!GO:0006914;autophagy;0.0216523478899838!GO:0006955;immune response;0.0219331072180366!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0219806648107308!GO:0015002;heme-copper terminal oxidase activity;0.0219806648107308!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0219806648107308!GO:0004129;cytochrome-c oxidase activity;0.0219806648107308!GO:0050863;regulation of T cell activation;0.0220404851329573!GO:0051223;regulation of protein transport;0.0221885467125366!GO:0005832;chaperonin-containing T-complex;0.0222232672124742!GO:0030880;RNA polymerase complex;0.0224165680987172!GO:0048468;cell development;0.0229890246106294!GO:0007004;telomere maintenance via telomerase;0.0229890246106294!GO:0044438;microbody part;0.0230396088930054!GO:0044439;peroxisomal part;0.0230396088930054!GO:0046983;protein dimerization activity;0.0233292315481675!GO:0050852;T cell receptor signaling pathway;0.0233680173314043!GO:0030833;regulation of actin filament polymerization;0.023452020044022!GO:0007041;lysosomal transport;0.0236221257832979!GO:0032984;macromolecular complex disassembly;0.0239405932623251!GO:0004177;aminopeptidase activity;0.0239881902890783!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0242791897138732!GO:0008139;nuclear localization sequence binding;0.0243205906800078!GO:0006919;caspase activation;0.0244750041361693!GO:0015923;mannosidase activity;0.025149736702895!GO:0000118;histone deacetylase complex;0.0253090338226557!GO:0031988;membrane-bound vesicle;0.0257342784887249!GO:0008022;protein C-terminus binding;0.0266342623005962!GO:0009116;nucleoside metabolic process;0.0273785227325283!GO:0019058;viral infectious cycle;0.0281582464496898!GO:0040029;regulation of gene expression, epigenetic;0.0281747586117964!GO:0043022;ribosome binding;0.028446543507397!GO:0004576;oligosaccharyl transferase activity;0.0286140704398782!GO:0042608;T cell receptor binding;0.0287887397176102!GO:0031410;cytoplasmic vesicle;0.0287887397176102!GO:0043281;regulation of caspase activity;0.0289105392735914!GO:0045058;T cell selection;0.0289105392735914!GO:0030127;COPII vesicle coat;0.0291746991884181!GO:0012507;ER to Golgi transport vesicle membrane;0.0291746991884181!GO:0051091;positive regulation of transcription factor activity;0.0300910436179144!GO:0006839;mitochondrial transport;0.0300973200109504!GO:0045069;regulation of viral genome replication;0.0302490233323072!GO:0030119;AP-type membrane coat adaptor complex;0.030809238327091!GO:0030041;actin filament polymerization;0.031087147069149!GO:0030134;ER to Golgi transport vesicle;0.0310919571357669!GO:0006378;mRNA polyadenylation;0.0314386537711953!GO:0048487;beta-tubulin binding;0.0314995653212375!GO:0005791;rough endoplasmic reticulum;0.0320892257216993!GO:0016788;hydrolase activity, acting on ester bonds;0.0330077557479061!GO:0050851;antigen receptor-mediated signaling pathway;0.034726849559231!GO:0000786;nucleosome;0.0349934276508601!GO:0031903;microbody membrane;0.0353703989628704!GO:0005778;peroxisomal membrane;0.0353703989628704!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0355061771994181!GO:0016585;chromatin remodeling complex;0.0355061771994181!GO:0016505;apoptotic protease activator activity;0.0356116079937551!GO:0001784;phosphotyrosine binding;0.0356211641314429!GO:0032318;regulation of Ras GTPase activity;0.0357205795299016!GO:0008250;oligosaccharyl transferase complex;0.0357205795299016!GO:0019904;protein domain specific binding;0.0377909995649016!GO:0030125;clathrin vesicle coat;0.0378450120655289!GO:0030665;clathrin coated vesicle membrane;0.0378450120655289!GO:0030131;clathrin adaptor complex;0.038313542361405!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0387740856876177!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.038792819631518!GO:0000428;DNA-directed RNA polymerase complex;0.038792819631518!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0391286207134921!GO:0050811;GABA receptor binding;0.0392141144781361!GO:0000178;exosome (RNase complex);0.0393764808972304!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0400363474554564!GO:0010257;NADH dehydrogenase complex assembly;0.0400363474554564!GO:0033108;mitochondrial respiratory chain complex assembly;0.0400363474554564!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0400801572355186!GO:0051219;phosphoprotein binding;0.0409119953050014!GO:0008180;signalosome;0.0409552045802846!GO:0045603;positive regulation of endothelial cell differentiation;0.0415743287008757!GO:0000339;RNA cap binding;0.041658757067998!GO:0000303;response to superoxide;0.0416826937875319!GO:0007021;tubulin folding;0.042165578815283!GO:0045309;protein phosphorylated amino acid binding;0.0422439083466359!GO:0043280;positive regulation of caspase activity;0.0426575154377127!GO:0043624;cellular protein complex disassembly;0.0429857524031916!GO:0002440;production of molecular mediator of immune response;0.0435268966964812!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0435512917300698!GO:0030522;intracellular receptor-mediated signaling pathway;0.0437472030232211!GO:0002378;immunoglobulin biosynthetic process;0.0437472030232211!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0437472030232211!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0437472030232211!GO:0008276;protein methyltransferase activity;0.0437699858035024!GO:0000287;magnesium ion binding;0.0438952117134422!GO:0004402;histone acetyltransferase activity;0.0441333149442838!GO:0004468;lysine N-acetyltransferase activity;0.0441333149442838!GO:0006144;purine base metabolic process;0.0441735152477865!GO:0003988;acetyl-CoA C-acyltransferase activity;0.044452327190273!GO:0008094;DNA-dependent ATPase activity;0.044452327190273!GO:0008637;apoptotic mitochondrial changes;0.044452327190273!GO:0007259;JAK-STAT cascade;0.0447742440907183!GO:0000090;mitotic anaphase;0.0447742440907183!GO:0051322;anaphase;0.0447742440907183!GO:0005777;peroxisome;0.0449218811692573!GO:0042579;microbody;0.0449218811692573!GO:0048002;antigen processing and presentation of peptide antigen;0.0449441567226071!GO:0043241;protein complex disassembly;0.0449915323298574!GO:0046979;TAP2 binding;0.045688364515687!GO:0046977;TAP binding;0.045688364515687!GO:0046978;TAP1 binding;0.045688364515687!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0458904690463307!GO:0031901;early endosome membrane;0.0459766856442106!GO:0005784;translocon complex;0.0461714813452088!GO:0000119;mediator complex;0.0462063215159893!GO:0000279;M phase;0.0469556614404046!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0476396888139367!GO:0006406;mRNA export from nucleus;0.0479090740570727!GO:0031461;cullin-RING ubiquitin ligase complex;0.0479548017396952!GO:0016311;dephosphorylation;0.0481231424763573!GO:0016023;cytoplasmic membrane-bound vesicle;0.0484872706351492
 |sample_id=12148
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=ELF1,2,4:2.63529550636;RUNX1..3:2.27513047476;RORA:2.16212482132;ETS1,2:2.08956907869;T:2.05670579376;STAT1,3:1.86036088088;PDX1:1.83377990879;PAX3,7:1.76322894271;FOX{D1,D2}:1.74682510301;FOXO1,3,4:1.66813753446;DMAP1_NCOR{1,2}_SMARC:1.60153762551;SPI1:1.6008162909;CDX1,2,4:1.54771721068;TLX2:1.53980488977;ELK1,4_GABP{A,B1}:1.51100642458;IRF1,2:1.46313295388;HMX1:1.45666181011;BPTF:1.39209646949;SPIB:1.38382815034;FOX{F1,F2,J1}:1.36934351805;RFX2..5_RFXANK_RFXAP:1.29543124996;PAX6:1.08430815518;IRF7:1.0801313043;TGIF1:1.07173387606;CRX:0.991712883879;CREB1:0.924197548773;LEF1_TCF7_TCF7L1,2:0.83228906606;PBX1:0.789536913823;GATA6:0.786009484431;BREu{core}:0.746876822367;NANOG{mouse}:0.732716775411;FOXN1:0.677971375442;SPZ1:0.67792724817;ATF5_CREB3:0.670538206249;NFATC1..3:0.637100309271;NFIL3:0.633022845021;NRF1:0.602247714077;VSX1,2:0.562876611705;FOX{I1,J2}:0.541571016619;YY1:0.527860203283;PAX2:0.523448310576;FOXA2:0.51477439133;NFKB1_REL_RELA:0.508518529314;SREBF1,2:0.491655581206;ALX1:0.46466016954;EP300:0.45484104658;NKX2-2,8:0.42881501876;IKZF2:0.414415719008;MYOD1:0.4082334221;ZEB1:0.368783719768;FOXQ1:0.349238089121;HBP1_HMGB_SSRP1_UBTF:0.318438357024;RBPJ:0.294211111162;SNAI1..3:0.271613425779;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.266682264077;ZNF143:0.252311823022;SOX5:0.246768182212;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.239153167918;AHR_ARNT_ARNT2:0.226432488727;RFX1:0.220667606072;TAL1_TCF{3,4,12}:0.199764426716;ATF4:0.198188325131;RXRA_VDR{dimer}:0.19225483829;FOXP3:0.17995449719;HES1:0.177721542048;ATF2:0.139666932173;AR:0.135583364128;NFIX:0.134037273889;ZNF148:0.133441452242;STAT5{A,B}:0.112326312269;GCM1,2:0.10134960345;MAFB:0.0963467045397;MYB:0.0923398963344;NANOG:0.0693093641197;NKX6-1,2:0.0633585515165;JUN:0.0227073872909;CEBPA,B_DDIT3:0.0159729792777;HOX{A6,A7,B6,B7}:0.00482933245469;OCT4_SOX2{dimer}:0.00286933047197;CUX2:-0.0151826210731;HLF:-0.0466548606633;NKX2-1,4:-0.053285417658;NR5A1,2:-0.0632702369695;LMO2:-0.0654533459332;TBX4,5:-0.0706057617195;SOX2:-0.0893052255413;HMGA1,2:-0.0903948597744;PAX4:-0.0942608376583;ADNP_IRX_SIX_ZHX:-0.119273783354;NFE2L1:-0.123003121258;NR1H4:-0.139102928694;STAT2,4,6:-0.180886311394;NFY{A,B,C}:-0.195748330936;FOSL2:-0.212864062499;ZBTB16:-0.236206517927;PRRX1,2:-0.257477362892;POU1F1:-0.262012721649;HNF1A:-0.269979894115;E2F1..5:-0.295051672363;HNF4A_NR2F1,2:-0.299783022748;GLI1..3:-0.300182802825;NR3C1:-0.308685360497;PAX8:-0.311207959065;MYFfamily:-0.369929461458;NHLH1,2:-0.371782678969;TFAP4:-0.374977405248;POU2F1..3:-0.379613089305;DBP:-0.385030158848;FOXD3:-0.392148578142;HIF1A:-0.394735656063;ATF6:-0.405160024185;BACH2:-0.416312134773;FOS_FOS{B,L1}_JUN{B,D}:-0.437709838252;NFE2L2:-0.44889925794;PAX5:-0.468477428978;ZNF238:-0.477860618519;POU5F1:-0.486325762018;MZF1:-0.489986907624;MTF1:-0.506577334674;RREB1:-0.517822670125;ALX4:-0.530576218502;FOXP1:-0.531870493096;ESR1:-0.56073825654;ZNF423:-0.567615424532;NFE2:-0.584059991793;GFI1:-0.591726531225;HOXA9_MEIS1:-0.612144794398;MEF2{A,B,C,D}:-0.622956768076;ZFP161:-0.629632863939;REST:-0.641092090413;ARID5B:-0.662823353337;SRF:-0.667744666919;FOXM1:-0.691334720572;GATA4:-0.692206570635;ZBTB6:-0.69885940465;EGR1..3:-0.716087141453;HAND1,2:-0.719862577369;SMAD1..7,9:-0.730803281543;NKX3-1:-0.751457132262;MAZ:-0.753639277245;PATZ1:-0.755024218651;MTE{core}:-0.777340460075;SOX{8,9,10}:-0.786863484408;ZNF384:-0.79998973618;MED-1{core}:-0.802841205945;TFCP2:-0.806514856085;NKX3-2:-0.829405037601;HSF1,2:-0.863661448988;NKX2-3_NKX2-5:-0.869325880767;PPARG:-0.90771905706;EVI1:-0.910005470578;PRDM1:-0.913027915096;XCPE1{core}:-0.928805371207;TP53:-0.983546057945;KLF4:-1.01672323161;bHLH_family:-1.03037844829;AIRE:-1.03464812498;XBP1:-1.03473527418;LHX3,4:-1.0420388113;GTF2I:-1.07329439427;HOX{A5,B5}:-1.10066702654;GFI1B:-1.1426007593;EN1,2:-1.14585012121;SP1:-1.14685322625;CDC5L:-1.17144367386;MYBL2:-1.17899598808;EBF1:-1.20419000052;RXR{A,B,G}:-1.21251516673;SOX17:-1.26178282636;TFAP2B:-1.26666163714;TLX1..3_NFIC{dimer}:-1.33168303089;GZF1:-1.35896145763;PITX1..3:-1.36990753447;TFDP1:-1.38064509112;HOX{A4,D4}:-1.38943899221;UFEwm:-1.41144321932;ZIC1..3:-1.43757538583;ONECUT1,2:-1.45050461798;HIC1:-1.50252373481;NR6A1:-1.50826273857;ESRRA:-1.53072204083;TBP:-1.55261757168;TFAP2{A,C}:-1.62486464176;GTF2A1,2:-1.62531923099;POU6F1:-1.65674572561;TEAD1:-1.67390743111;TOPORS:-1.83873507674;TEF:-1.86852564003;PAX1,9:-1.89242382072;FOXL1:-2.06738457861;POU3F1..4:-2.07960492938;IKZF1:-2.38537268292
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12148-128F6;search_select_hide=table117:FF:12148-128F6
 }}

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FF:12148-128F6: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:32, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0