FF:11225-116C1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005494 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005494 | ||
|accession_numbers=CAGE;DRX008176;DRR009048;DRZ000473;DRZ001858;DRZ011823;DRZ013208 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037129;DRR041495;DRZ007137 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000624 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000031 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.19!152.25!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!2.10!124.91!ATXN7;;chr5:133450365..133450444,+!p1@TCF7!1.96!392.63!TCF7;;chr1:25256756..25256774,-!p1@RUNX3!1.93!154.22!RUNX3;;chr4:109087445..109087463,-!p1@LEF1!1.93!83.80!LEF1;;chr2:192015701..192015743,-!p1@STAT4!1.92!110.75!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.92!82.22!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.89!77.11!FOXP1;;chr10:8096772..8096787,+!p2@GATA3!1.88!87.93!GATA3;;chr2:157189180..157189290,-!p1@NR4A2!1.86!356.24!NR4A2;;chr19:54058073..54058088,+!p1@ZNF331!1.83!67.27!ZNF331;;chr19:45971246..45971265,+!p1@FOSB!1.80!1075.41!FOSB;;chr10:8096631..8096660,+!p1@GATA3!1.78!70.42!GATA3;;chr6:91006518..91006570,-!p1@BACH2!1.72!114.49!BACH2;;chr15:60884706..60884743,-!p1@RORA!1.69!237.63!RORA;;chr20:50159198..50159299,-!p1@NFATC2!1.69!69.64!NFATC2;;chr5:133451347..133451358,+!p3@TCF7!1.68!47.41!TCF7;;chr2:231090433..231090469,+!p1@SP140!1.68!47.01!SP140;;chr9:3525727..3525828,-!p2@RFX3!1.67!112.52!RFX3;;chr19:54041669..54041697,+!p2@ZNF331!1.67!45.24!ZNF331;;chrY:21906594..21906622,-!p1@KDM5D!1.65!44.06!KDM5D;;chr3:18486354..18486377,-!p2@SATB1!1.62!50.16!SATB1;;chr3:71542684..71542720,-!p18@FOXP1!1.62!40.92!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.62!40.52!LEF1;;chrX:106960285..106960299,-!p1@TSC22D3!1.61!1013.45!TSC22D3;;chr14:75745523..75745537,+!p1@FOS!1.60!4410.82!FOS;;chr2:192015750..192015793,-!p2@STAT4!1.59!49.96!STAT4;;chr6:106546808..106546833,+!p3@PRDM1!1.57!45.64!PRDM1;;chr3:39195075..39195088,-!p1@CSRNP1!1.55!205.76!CSRNP1;;chr3:71355163..71355209,-!p5@FOXP1!1.54!45.83!FOXP1;;chr6:12009042..12009092,+!p6@HIVEP1!1.51!40.92!HIVEP1;;chr19:16435625..16435682,+!p1@KLF2!1.49!912.73!KLF2;;chr9:117150254..117150271,-!p1@AKNA!1.49!80.06!AKNA;;chr9:102584262..102584276,+!p1@NR4A3!1.49!65.90!NR4A3;;chr7:50343895..50343936,+!p5@IKZF1!1.49!30.10!IKZF1;;chr3:71542651..71542683,-!p22@FOXP1!1.49!29.90!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.48!29.51!IKZF3;;chr2:157189617..157189667,-!p4@NR4A2!1.47!28.52!NR4A2;;chr1:59249688..59249703,-!p3@JUN!1.46!161.30!JUN;;chr19:19729477..19729542,-!p1@PBX4!1.46!58.82!PBX4;;chr10:35484053..35484076,+!p1@CREM!1.45!66.09!CREM;;chr20:51588873..51588953,+!p1@TSHZ2!1.45!35.60!TSHZ2;;chr19:12902289..12902307,+!p1@JUNB!1.43!5631.41!JUNB;;chr1:25291475..25291511,-!p2@RUNX3!1.43!26.16!RUNX3;;chr6:106546834..106546850,+!p4@PRDM1!1.42!25.57!PRDM1;;chr6:391743..391759,+!p1@IRF4!1.42!25.57!IRF4;;chr7:50344251..50344288,+!p3@IKZF1!1.42!25.57!IKZF1;;chr1:59249707..59249727,-!p1@JUN!1.38!932.60!JUN;;chr11:67007548..67007610,+!p3@KDM2A!1.37!160.91!KDM2A;;chr8:123793988..123794016,+!p1@ZHX2!1.37!38.95!ZHX2;;chr6:91006575..91006602,-!p2@BACH2!1.37!33.24!BACH2;;chr5:131826457..131826514,-!p1@IRF1!1.36!822.25!IRF1;;chr21:36421535..36421610,-!p2@RUNX1!1.35!73.96!RUNX1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.44!SP140;;chr13:74707894..74707947,-!p6@KLF12!1.34!23.21!KLF12;;chr3:18487057..18487105,-!p4@SATB1!1.34!20.65!SATB1;;chr4:103422499..103422632,+!p1@NFKB1!1.33!415.25!NFKB1;;chr9:102584241..102584261,+!p4@NR4A3!1.33!31.08!NR4A3;;chr14:99738138..99738163,-!p1@BCL11B!1.33!20.46!BCL11B;;chrX:106960221..106960236,-!p3@TSC22D3!1.32!54.10!TSC22D3;;chr7:104654690..104654704,+!p2@MLL5!1.32!38.95!MLL5;;chr20:51589835..51589848,+!p5@TSHZ2!1.32!20.06!TSHZ2;;chr12:72056800..72056834,+!p1@THAP2!1.31!25.77!THAP2;;chr17:37934365..37934387,-!p2@IKZF3!1.31!19.47!IKZF3;;chrX:106960180..106960197,-!p2@TSC22D3!1.30!70.82!TSC22D3;;chr10:3824332..3824425,-!p4@KLF6!1.28!28.92!KLF6;;chr8:81397820..81397836,+!p2@ZBTB10!1.27!22.03!ZBTB10;;chr19:16435423..16435484,+!p5@KLF2!1.27!17.70!KLF2;;chr7:104654718..104654741,+!p3@MLL5!1.26!24.98!MLL5;;chr8:81397846..81397860,+!p3@ZBTB10!1.26!21.64!ZBTB10;;chr2:43453734..43453751,-!p1@ZFP36L2!1.25!1729.47!ZFP36L2;;chr10:3827389..3827408,-!p1@KLF6!1.25!1260.52!KLF6;;chr11:128392273..128392308,-!p2@ETS1!1.25!70.62!ETS1;;chr19:12721790..12721810,+!p2@ZNF791!1.25!45.83!ZNF791;;chr14:64971288..64971316,-!p2@ZBTB25!1.24!50.36!ZBTB25;;chr3:23986824..23986848,+!p2@NR1D2!1.23!88.72!NR1D2;;chr14:64970670..64970712,-!p3@ZBTB25!1.21!32.85!ZBTB25;;chr4:38665769..38665801,+!p2@KLF3!1.20!133.17!KLF3;;chr10:35416142..35416169,+!p3@CREM!1.20!39.34!CREM;;chr10:35484090..35484104,+!p6@CREM!1.20!14.75!CREM;;chr19:54041645..54041661,+!p5@ZNF331!1.20!14.75!ZNF331;;chr13:41593425..41593480,-!p1@ELF1!1.19!90.09!ELF1;;chr4:109089573..109089585,-!p8@LEF1!1.19!14.36!LEF1;;chr14:99737850..99737852,-!p3@BCL11B!1.19!14.36!BCL11B;;chr7:50344289..50344323,+!p1@IKZF1!1.18!14.16!IKZF1;;chrX:49121165..49121179,-!p1@FOXP3!1.18!13.97!FOXP3;;chr3:71179699..71179744,-!p2@FOXP1!1.17!102.09!FOXP1;;chr14:65569101..65569119,-!p3@MAX!1.17!43.67!MAX;;chr4:87927888..87927912,+!p18@AFF1!1.17!13.77!AFF1;;chr15:60884747..60884774,-!p3@RORA!1.16!33.24!RORA;;chr5:142782823..142782854,-!p3@NR3C1!1.16!19.08!NR3C1;;chr18:46475696..46475713,-!p1@SMAD7!1.16!14.95!SMAD7;;chr14:35873947..3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| |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.19!152.25!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!2.10!124.91!ATXN7;;chr5:133450365..133450444,+!p1@TCF7!1.96!392.63!TCF7;;chr1:25256756..25256774,-!p1@RUNX3!1.93!154.22!RUNX3;;chr4:109087445..109087463,-!p1@LEF1!1.93!83.80!LEF1;;chr2:192015701..192015743,-!p1@STAT4!1.92!110.75!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.92!82.22!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.89!77.11!FOXP1;;chr10:8096772..8096787,+!p2@GATA3!1.88!87.93!GATA3;;chr2:157189180..157189290,-!p1@NR4A2!1.86!356.24!NR4A2;;chr19:54058073..54058088,+!p1@ZNF331!1.83!67.27!ZNF331;;chr19:45971246..45971265,+!p1@FOSB!1.80!1075.41!FOSB;;chr10:8096631..8096660,+!p1@GATA3!1.78!70.42!GATA3;;chr6:91006518..91006570,-!p1@BACH2!1.72!114.49!BACH2;;chr15:60884706..60884743,-!p1@RORA!1.69!237.63!RORA;;chr20:50159198..50159299,-!p1@NFATC2!1.69!69.64!NFATC2;;chr5:133451347..133451358,+!p3@TCF7!1.68!47.41!TCF7;;chr2:231090433..231090469,+!p1@SP140!1.68!47.01!SP140;;chr9:3525727..3525828,-!p2@RFX3!1.67!112.52!RFX3;;chr19:54041669..54041697,+!p2@ZNF331!1.67!45.24!ZNF331;;chrY:21906594..21906622,-!p1@KDM5D!1.65!44.06!KDM5D;;chr3:18486354..18486377,-!p2@SATB1!1.62!50.16!SATB1;;chr3:71542684..71542720,-!p18@FOXP1!1.62!40.92!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.62!40.52!LEF1;;chrX:106960285..106960299,-!p1@TSC22D3!1.61!1013.45!TSC22D3;;chr14:75745523..75745537,+!p1@FOS!1.60!4410.82!FOS;;chr2:192015750..192015793,-!p2@STAT4!1.59!49.96!STAT4;;chr6:106546808..106546833,+!p3@PRDM1!1.57!45.64!PRDM1;;chr3:39195075..39195088,-!p1@CSRNP1!1.55!205.76!CSRNP1;;chr3:71355163..71355209,-!p5@FOXP1!1.54!45.83!FOXP1;;chr6:12009042..12009092,+!p6@HIVEP1!1.51!40.92!HIVEP1;;chr19:16435625..16435682,+!p1@KLF2!1.49!912.73!KLF2;;chr9:117150254..117150271,-!p1@AKNA!1.49!80.06!AKNA;;chr9:102584262..102584276,+!p1@NR4A3!1.49!65.90!NR4A3;;chr7:50343895..50343936,+!p5@IKZF1!1.49!30.10!IKZF1;;chr3:71542651..71542683,-!p22@FOXP1!1.49!29.90!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.48!29.51!IKZF3;;chr2:157189617..157189667,-!p4@NR4A2!1.47!28.52!NR4A2;;chr1:59249688..59249703,-!p3@JUN!1.46!161.30!JUN;;chr19:19729477..19729542,-!p1@PBX4!1.46!58.82!PBX4;;chr10:35484053..35484076,+!p1@CREM!1.45!66.09!CREM;;chr20:51588873..51588953,+!p1@TSHZ2!1.45!35.60!TSHZ2;;chr19:12902289..12902307,+!p1@JUNB!1.43!5631.41!JUNB;;chr1:25291475..25291511,-!p2@RUNX3!1.43!26.16!RUNX3;;chr6:106546834..106546850,+!p4@PRDM1!1.42!25.57!PRDM1;;chr6:391743..391759,+!p1@IRF4!1.42!25.57!IRF4;;chr7:50344251..50344288,+!p3@IKZF1!1.42!25.57!IKZF1;;chr1:59249707..59249727,-!p1@JUN!1.38!932.60!JUN;;chr11:67007548..67007610,+!p3@KDM2A!1.37!160.91!KDM2A;;chr8:123793988..123794016,+!p1@ZHX2!1.37!38.95!ZHX2;;chr6:91006575..91006602,-!p2@BACH2!1.37!33.24!BACH2;;chr5:131826457..131826514,-!p1@IRF1!1.36!822.25!IRF1;;chr21:36421535..36421610,-!p2@RUNX1!1.35!73.96!RUNX1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.44!SP140;;chr13:74707894..74707947,-!p6@KLF12!1.34!23.21!KLF12;;chr3:18487057..18487105,-!p4@SATB1!1.34!20.65!SATB1;;chr4:103422499..103422632,+!p1@NFKB1!1.33!415.25!NFKB1;;chr9:102584241..102584261,+!p4@NR4A3!1.33!31.08!NR4A3;;chr14:99738138..99738163,-!p1@BCL11B!1.33!20.46!BCL11B;;chrX:106960221..106960236,-!p3@TSC22D3!1.32!54.10!TSC22D3;;chr7:104654690..104654704,+!p2@MLL5!1.32!38.95!MLL5;;chr20:51589835..51589848,+!p5@TSHZ2!1.32!20.06!TSHZ2;;chr12:72056800..72056834,+!p1@THAP2!1.31!25.77!THAP2;;chr17:37934365..37934387,-!p2@IKZF3!1.31!19.47!IKZF3;;chrX:106960180..106960197,-!p2@TSC22D3!1.30!70.82!TSC22D3;;chr10:3824332..3824425,-!p4@KLF6!1.28!28.92!KLF6;;chr8:81397820..81397836,+!p2@ZBTB10!1.27!22.03!ZBTB10;;chr19:16435423..16435484,+!p5@KLF2!1.27!17.70!KLF2;;chr7:104654718..104654741,+!p3@MLL5!1.26!24.98!MLL5;;chr8:81397846..81397860,+!p3@ZBTB10!1.26!21.64!ZBTB10;;chr2:43453734..43453751,-!p1@ZFP36L2!1.25!1729.47!ZFP36L2;;chr10:3827389..3827408,-!p1@KLF6!1.25!1260.52!KLF6;;chr11:128392273..128392308,-!p2@ETS1!1.25!70.62!ETS1;;chr19:12721790..12721810,+!p2@ZNF791!1.25!45.83!ZNF791;;chr14:64971288..64971316,-!p2@ZBTB25!1.24!50.36!ZBTB25;;chr3:23986824..23986848,+!p2@NR1D2!1.23!88.72!NR1D2;;chr14:64970670..64970712,-!p3@ZBTB25!1.21!32.85!ZBTB25;;chr4:38665769..38665801,+!p2@KLF3!1.20!133.17!KLF3;;chr10:35416142..35416169,+!p3@CREM!1.20!39.34!CREM;;chr10:35484090..35484104,+!p6@CREM!1.20!14.75!CREM;;chr19:54041645..54041661,+!p5@ZNF331!1.20!14.75!ZNF331;;chr13:41593425..41593480,-!p1@ELF1!1.19!90.09!ELF1;;chr4:109089573..109089585,-!p8@LEF1!1.19!14.36!LEF1;;chr14:99737850..99737852,-!p3@BCL11B!1.19!14.36!BCL11B;;chr7:50344289..50344323,+!p1@IKZF1!1.18!14.16!IKZF1;;chrX:49121165..49121179,-!p1@FOXP3!1.18!13.97!FOXP3;;chr3:71179699..71179744,-!p2@FOXP1!1.17!102.09!FOXP1;;chr14:65569101..65569119,-!p3@MAX!1.17!43.67!MAX;;chr4:87927888..87927912,+!p18@AFF1!1.17!13.77!AFF1;;chr15:60884747..60884774,-!p3@RORA!1.16!33.24!RORA;;chr5:142782823..142782854,-!p3@NR3C1!1.16!19.08!NR3C1;;chr18:46475696..46475713,-!p1@SMAD7!1.16!14.95!SMAD7;;chr14:35873947..35873965,-!p1@NFKBIA!1.15!814.58!NFKBIA;;chr2:61108650..61108687,+!p2@REL!1.15!64.32!REL;;chr6:143266297..143266356,-!p1@HIVEP2!1.14!60.98!HIVEP2;;chr1:45805693..45805718,+!p3@TOE1!1.14!27.74!TOE1;;chr2:192015677..192015691,-!p3@STAT4!1.14!12.79!STAT4;;chr3:39195139..39195150,-!p3@CSRNP1!1.13!15.93!CSRNP1;;chr6:91006503..91006517,-!p3@BACH2!1.13!12.59!BACH2;;chr2:97202480..97202499,+!p1@ARID5A!1.12!123.34!ARID5A;;chr10:104154246..104154347,+!p3@NFKB2!1.12!74.95!NFKB2;;chr1:91487836..91487854,-!p3@ZNF644!1.12!27.93!ZNF644;;chr2:97202991..97203043,+!p3@ARID5A!1.12!12.20!ARID5A;;chr9:102584128..102584144,+!p3@NR4A3!1.11!23.02!NR4A3;;chrX:106960249..106960260,-!p5@TSC22D3!1.11!19.08!TSC22D3;;chr7:106809470..106809481,+!p2@HBP1!1.11!16.92!HBP1;;chr11:128392085..128392232,-!p1@ETS1!1.10!392.24!ETS1;;chr19:16435523..16435619,+!p2@KLF2!1.09!15.93!KLF2;;chr17:38497662..38497713,+!p4@RARA!1.09!13.18!RARA;;chr19:18392422..18392440,-!p1@JUND!1.08!1504.44!JUND;;chr5:172483347..172483407,+!p1@C5orf41!1.08!84.19!CREBRF;;chr3:18466787..18466839,-!p1@SATB1!1.08!49.96!SATB1;;chr9:32550839..32550962,-!p3@TOPORS!1.08!27.93!TOPORS;;chr12:72056773..72056796,+!p3@THAP2!1.08!14.56!THAP2;;chr3:18480217..18480239,-!p3@SATB1!1.08!11.02!SATB1;;chr7:50344144..50344157,+!p6@IKZF1!1.07!10.82!IKZF1;;chr3:71542747..71542766,-!p34@FOXP1!1.07!10.62!FOXP1;;chr14:90085458..90085557,-!p1@FOXN3!1.06!110.55!FOXN3;;chr10:3827371..3827386,-!p2@KLF6!1.06!89.11!KLF6;;chr6:12008986..12009016,+!p3@HIVEP1!1.06!32.85!HIVEP1;;chr9:114287433..114287513,+!p1@ZNF483!1.06!27.34!ZNF483;;chr3:63898321..63898396,+!p3@ATXN7!1.06!24.39!ATXN7;;chr19:45972701..45972774,+!p2@FOSB!1.06!14.56!FOSB;;chr8:102218439..102218455,-!p3@ZNF706!1.06!10.43!ZNF706;;chr3:101568349..101568365,+!p1@NFKBIZ!1.05!531.51!NFKBIZ;;chr15:31619326..31619390,+!p2@KLF13!1.05!120.19!KLF13;;chr2:61108695..61108753,+!p1@REL!1.05!71.80!REL;;chr7:17338324..17338341,+!p3@AHR!1.05!34.82!AHR;;chr3:114819124..114819200,-!p3@ZBTB20!1.05!24.00!ZBTB20;;chr1:59249732..59249749,-!p2@JUN!1.04!120.58!JUN;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.04!56.65!ZNF10;;chr19:54041603..54041615,+!p10@ZNF331!1.04!10.03!ZNF331;;chr17:38020516..38020544,-!p5@IKZF3!1.04!10.03!IKZF3;;chrY:2803415..2803468,+!p1@ZFY!1.04!10.03!ZFY;;chr4:109089901..109089930,-!p3@LEF1!1.04!10.03!LEF1;;chr11:67007477..67007493,+!p2@KDM2A!1.03!84.39!KDM2A;;chr10:3827417..3827428,-!p3@KLF6!1.03!84.00!KLF6;;chr3:114866084..114866118,-!p2@ZBTB20!1.03!35.80!ZBTB20;;chr13:74708246..74708264,-!p8@KLF12!1.03!10.82!KLF12;;chr20:56195474..56195506,-!p1@ZBP1!1.03!9.84!ZBP1;;chr7:99097863..99097936,-!p1@ZNF394!1.02!96.19!ZNF394;;chr13:41240717..41240735,-!p2@FOXO1!1.02!65.11!FOXO1;;chrX:101186981..101187030,-!p1@ZMAT1!1.02!31.47!ZMAT1;;chr19:19779619..19779670,+!p1@ZNF101!1.02!27.34!ZNF101;;chr1:59249645..59249656,-!p4@JUN!1.02!24.00!JUN;;chr11:85375237..85375277,-!p4@CREBZF!1.02!11.02!CREBZF;;chr7:64126503..64126528,+!p1@ZNF107!1.01!66.29!ZNF107;;chr9:73028332..73028385,-!p3@KLF9!1.01!32.26!KLF9;;chr9:20620829..20620848,-!p7@MLLT3!1.01!9.25!MLLT3;;chr4:109088130..109088163,-!p13@LEF1!1.01!9.25!LEF1;;chr19:54041574..54041589,+!p6@ZNF331!1.01!9.25!ZNF331;;chr1:235491462..235491510,-!p1@ARID4B!1.00!165.04!ARID4B;;chr3:39195037..39195069,-!p2@CSRNP1!1.00!56.46!CSRNP1;;chr19:38085768..38085821,+!p1@ZNF540!1.00!13.77!ZNF540;;chr7:127032330..127032356,-!p3@ZNF800!1.00!11.61!ZNF800;;chr14:75988831..75988847,+!p2@BATF!1.00!9.05!BATF;;chr4:149365827..149365870,-!p5@NR3C2!1.00!9.05!NR3C2;;chr18:77155922..77155939,+!p1@NFATC1!0.99!24.79!NFATC1;;chr7:21467642..21467671,+!p2@SP4!0.99!20.46!SP4;;chr8:81398511..81398523,+!p8@ZBTB10!0.99!10.82!ZBTB10;;chr8:123794038..123794056,+!p5@ZHX2!0.99!8.85!ZHX2;;chr2:174828545..174828644,-!p1@SP3!0.98!132.78!SP3;;chr7:21467674..21467727,+!p1@SP4!0.98!34.82!SP4;;chr1:91487774..91487802,-!p2@ZNF644!0.98!23.02!ZNF644;;chr17:56565257..56565283,-!p2@HSF5!0.98!8.46!HSF5;;chr4:109088940..109089037,-!p4@LEF1!0.98!8.46!LEF1;;chr3:71114066..71114114,-!p1@FOXP1!0.97!174.48!FOXP1;;chr2:208394817..208394834,+!p3@CREB1!0.97!34.62!CREB1;;chr8:81397876..81397898,+!p5@ZBTB10!0.97!10.03!ZBTB10;;chr5:142814241..142814278,-!p12@NR3C1!0.97!8.26!NR3C1;;chr8:123793252..123793266,+!p10@ZHX2!0.97!8.26!ZHX2;;chr20:51589732..51589769,+!p3@TSHZ2!0.97!8.26!TSHZ2;;chrY:21906761..21906810,-!p2@KDM5D!0.97!8.26!KDM5D;;chr17:38020481..38020506,-!p7@IKZF3!0.97!8.26!IKZF3;;chr19:19843900..19843928,-!p1@ZNF14!0.96!41.70!ZNF14;;chr6:157098579..157098634,+!p4@ARID1B!0.96!18.69!ARID1B;;chr13:74708269..74708291,-!p7@KLF12!0.96!11.21!KLF12;;chr14:69262947..69262986,-!p3@ZFP36L1!0.96!9.84!ZFP36L1;;chr7:127032296..127032317,-!p4@ZNF800!0.96!9.64!ZNF800;;chr4:109088089..109088101,-!p11@LEF1!0.96!8.07!LEF1;;chr4:140005443..140005527,-!p2@ELF2!0.95!48.19!ELF2;;chr7:64838786..64838809,+!p2@ZNF92!0.95!46.82!ZNF92;;chr13:74708372..74708409,-!p4@KLF12!0.95!18.88!KLF12;;chr16:3313791..3313834,+!p2@ZNF263!0.95!18.10!ZNF263;;chr11:128563948..128564003,+!p1@FLI1!0.94!97.37!FL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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor1.CNhs10853.11225-116C1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor1.CNhs10853.11225-116C1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor1.CNhs10853.11225-116C1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor1.CNhs10853.11225-116C1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252b%2520T%2520Cells%252c%2520donor1.CNhs10853.11225-116C1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11225-116C1 | |id=FF:11225-116C1 | ||
|is_a=EFO:0002091;;FF:0000031;;FF:0000210 | |is_a=EFO:0002091;;FF:0000031;;FF:0000210 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs10853 | |||
|library_id_phase_based=2:CNhs10853 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11225 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.TTAGGC.11225 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11225 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.TTAGGC.11225 | |||
|name=CD4+ T Cells, donor1 | |name=CD4+ T Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10853,LSID702,release008,COMPLETED | |profile_hcage=CNhs10853,LSID702,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=3H100-23-10 | |rna_catalog_number=3H100-23-10 | ||
| Line 57: | Line 82: | ||
|rna_tube_id=116C1 | |rna_tube_id=116C1 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10009.TTAGGC | |||
|sample_age=53 | |sample_age=53 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 79: | Line 106: | ||
|top_motifs=PAX3,7:4.27376749486;FOXO1,3,4:3.57329905055;CREB1:3.40375886779;FOX{D1,D2}:3.33936645163;ATF4:3.17249672585;BPTF:3.06973216962;ATF5_CREB3:2.89674226251;RUNX1..3:2.79423052859;PITX1..3:2.70129129203;RFX2..5_RFXANK_RFXAP:2.52246214858;FOX{F1,F2,J1}:2.51981393367;FOXN1:2.49834628194;FOXP1:2.33318387029;CDX1,2,4:2.21803554574;ELF1,2,4:2.21118657184;DMAP1_NCOR{1,2}_SMARC:2.21103656783;ZBTB16:2.18096259982;RORA:2.13761589202;RFX1:1.89821617299;NKX6-1,2:1.83756541056;PAX4:1.81704307041;HMX1:1.81249355495;PAX2:1.8036186981;NFKB1_REL_RELA:1.74202420173;BREu{core}:1.71253729211;ETS1,2:1.70975291758;LEF1_TCF7_TCF7L1,2:1.62121780324;JUN:1.60122427962;IKZF2:1.57234728363;TGIF1:1.57060910515;FOX{I1,J2}:1.55383810968;ATF2:1.52191070654;PDX1:1.519047198;SPI1:1.35560781192;TOPORS:1.3218557876;NKX2-1,4:1.31135699926;IRF1,2:1.18037760723;SPIB:1.07680075537;GATA6:1.02258659165;HBP1_HMGB_SSRP1_UBTF:0.958505614433;AHR_ARNT_ARNT2:0.936332749297;T:0.907850754093;HIF1A:0.887015682263;PAX6:0.872064117079;TLX2:0.808026846304;CUX2:0.769109521166;NFATC1..3:0.747721657723;NFIL3:0.690381029629;HOX{A6,A7,B6,B7}:0.654558152095;SOX2:0.634529932148;ATF6:0.570974829933;ELK1,4_GABP{A,B1}:0.553786659092;EGR1..3:0.538789026004;ZEB1:0.527642491614;FOXA2:0.475141529606;AIRE:0.472658163154;MAFB:0.443954317671;PBX1:0.427985558147;SREBF1,2:0.425266348906;IRF7:0.41475810897;CRX:0.381735005222;HMGA1,2:0.375985762275;NKX3-1:0.357336954051;MYB:0.33790838644;SOX5:0.318644642577;TBX4,5:0.314823953866;SNAI1..3:0.311928825542;NFIX:0.294558079911;RREB1:0.265564258909;NANOG{mouse}:0.20218222661;STAT5{A,B}:0.148276335767;NKX2-2,8:0.139805844318;ZNF384:0.121591473764;NRF1:0.0990339668894;FOS_FOS{B,L1}_JUN{B,D}:0.0535433329556;YY1:0.0520267414185;FOSL2:0.0113069470236;EVI1:-0.0342040803268;EP300:-0.04478169847;E2F1..5:-0.0599242219436;STAT2,4,6:-0.0605628396852;NFY{A,B,C}:-0.105434164568;OCT4_SOX2{dimer}:-0.132992686394;DBP:-0.14393599208;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.156801947659;FOXP3:-0.156814606448;POU2F1..3:-0.191549477879;MYOD1:-0.216951033352;HOXA9_MEIS1:-0.228547140192;NR5A1,2:-0.240396459132;BACH2:-0.249941431006;NFE2L1:-0.259899031288;SMAD1..7,9:-0.274270416791;MYFfamily:-0.282251382418;HES1:-0.296744743936;ZFP161:-0.297133665996;VSX1,2:-0.302524854235;POU1F1:-0.324041000952;NFE2:-0.334227046364;MED-1{core}:-0.33684265638;STAT1,3:-0.343355823442;MZF1:-0.360200093853;LMO2:-0.36217854029;PRRX1,2:-0.371414057698;MTE{core}:-0.420429556588;FOXQ1:-0.425892991008;SRF:-0.433161368813;HLF:-0.442824436196;CEBPA,B_DDIT3:-0.444494671289;POU3F1..4:-0.445222572431;SPZ1:-0.450160791383;HNF4A_NR2F1,2:-0.478272946678;AR:-0.479388128286;NANOG:-0.505686947514;HNF1A:-0.507434918993;PPARG:-0.524489188211;GCM1,2:-0.564902359013;PATZ1:-0.575086661928;TFDP1:-0.605744707048;FOXM1:-0.613649619919;SOX17:-0.622018946582;ZNF143:-0.631662669645;NHLH1,2:-0.632037118597;PAX5:-0.649172544276;ALX4:-0.6723237626;SOX{8,9,10}:-0.704441747685;bHLH_family:-0.708152804916;TAL1_TCF{3,4,12}:-0.742366471593;GLI1..3:-0.748530073319;ALX1:-0.788408071208;FOXD3:-0.820462046768;GATA4:-0.830613070802;MEF2{A,B,C,D}:-0.847599791669;HOX{A5,B5}:-0.863690755514;MTF1:-0.871986481831;LHX3,4:-0.873016600889;RBPJ:-0.87700144953;NFE2L2:-0.899053492713;MAZ:-0.900603022547;FOXL1:-0.924233214022;RXRA_VDR{dimer}:-0.952215812222;MYBL2:-0.958894577516;ADNP_IRX_SIX_ZHX:-0.976953861888;ZBTB6:-0.984066060096;PAX8:-1.01214073724;TEF:-1.0170106973;GFI1:-1.04441546258;REST:-1.04825544233;SP1:-1.12785327255;HAND1,2:-1.15974374257;PRDM1:-1.16488079467;TFAP2B:-1.20537566273;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.25254132953;ZNF148:-1.26627156971;POU6F1:-1.30766403317;ZNF238:-1.3226407128;CDC5L:-1.32762815054;GFI1B:-1.35732748682;TP53:-1.3603918792;NR1H4:-1.39911058634;TBP:-1.41020958791;HIC1:-1.42837168547;GTF2A1,2:-1.47560003059;TFCP2:-1.48290080351;XCPE1{core}:-1.48508899271;ZIC1..3:-1.48560146306;UFEwm:-1.48975691924;POU5F1:-1.4930831633;ARID5B:-1.49458626892;ONECUT1,2:-1.51412779532;ZNF423:-1.5369242083;NKX2-3_NKX2-5:-1.55106337799;HSF1,2:-1.58778567201;TFAP4:-1.59850948855;GTF2I:-1.60144597391;TFAP2{A,C}:-1.61972855417;XBP1:-1.63441206139;NR6A1:-1.65324104167;EN1,2:-1.65928996628;TEAD1:-1.66905331135;TLX1..3_NFIC{dimer}:-1.67686538662;HOX{A4,D4}:-1.7554840268;KLF4:-1.81509263935;ESRRA:-1.83643036443;NR3C1:-2.06163015537;EBF1:-2.24441034995;GZF1:-2.28279954999;RXR{A,B,G}:-2.28849676601;NKX3-2:-2.34527933139;ESR1:-2.59610362318;IKZF1:-2.69673432008;PAX1,9:-2.79270781061 | |top_motifs=PAX3,7:4.27376749486;FOXO1,3,4:3.57329905055;CREB1:3.40375886779;FOX{D1,D2}:3.33936645163;ATF4:3.17249672585;BPTF:3.06973216962;ATF5_CREB3:2.89674226251;RUNX1..3:2.79423052859;PITX1..3:2.70129129203;RFX2..5_RFXANK_RFXAP:2.52246214858;FOX{F1,F2,J1}:2.51981393367;FOXN1:2.49834628194;FOXP1:2.33318387029;CDX1,2,4:2.21803554574;ELF1,2,4:2.21118657184;DMAP1_NCOR{1,2}_SMARC:2.21103656783;ZBTB16:2.18096259982;RORA:2.13761589202;RFX1:1.89821617299;NKX6-1,2:1.83756541056;PAX4:1.81704307041;HMX1:1.81249355495;PAX2:1.8036186981;NFKB1_REL_RELA:1.74202420173;BREu{core}:1.71253729211;ETS1,2:1.70975291758;LEF1_TCF7_TCF7L1,2:1.62121780324;JUN:1.60122427962;IKZF2:1.57234728363;TGIF1:1.57060910515;FOX{I1,J2}:1.55383810968;ATF2:1.52191070654;PDX1:1.519047198;SPI1:1.35560781192;TOPORS:1.3218557876;NKX2-1,4:1.31135699926;IRF1,2:1.18037760723;SPIB:1.07680075537;GATA6:1.02258659165;HBP1_HMGB_SSRP1_UBTF:0.958505614433;AHR_ARNT_ARNT2:0.936332749297;T:0.907850754093;HIF1A:0.887015682263;PAX6:0.872064117079;TLX2:0.808026846304;CUX2:0.769109521166;NFATC1..3:0.747721657723;NFIL3:0.690381029629;HOX{A6,A7,B6,B7}:0.654558152095;SOX2:0.634529932148;ATF6:0.570974829933;ELK1,4_GABP{A,B1}:0.553786659092;EGR1..3:0.538789026004;ZEB1:0.527642491614;FOXA2:0.475141529606;AIRE:0.472658163154;MAFB:0.443954317671;PBX1:0.427985558147;SREBF1,2:0.425266348906;IRF7:0.41475810897;CRX:0.381735005222;HMGA1,2:0.375985762275;NKX3-1:0.357336954051;MYB:0.33790838644;SOX5:0.318644642577;TBX4,5:0.314823953866;SNAI1..3:0.311928825542;NFIX:0.294558079911;RREB1:0.265564258909;NANOG{mouse}:0.20218222661;STAT5{A,B}:0.148276335767;NKX2-2,8:0.139805844318;ZNF384:0.121591473764;NRF1:0.0990339668894;FOS_FOS{B,L1}_JUN{B,D}:0.0535433329556;YY1:0.0520267414185;FOSL2:0.0113069470236;EVI1:-0.0342040803268;EP300:-0.04478169847;E2F1..5:-0.0599242219436;STAT2,4,6:-0.0605628396852;NFY{A,B,C}:-0.105434164568;OCT4_SOX2{dimer}:-0.132992686394;DBP:-0.14393599208;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.156801947659;FOXP3:-0.156814606448;POU2F1..3:-0.191549477879;MYOD1:-0.216951033352;HOXA9_MEIS1:-0.228547140192;NR5A1,2:-0.240396459132;BACH2:-0.249941431006;NFE2L1:-0.259899031288;SMAD1..7,9:-0.274270416791;MYFfamily:-0.282251382418;HES1:-0.296744743936;ZFP161:-0.297133665996;VSX1,2:-0.302524854235;POU1F1:-0.324041000952;NFE2:-0.334227046364;MED-1{core}:-0.33684265638;STAT1,3:-0.343355823442;MZF1:-0.360200093853;LMO2:-0.36217854029;PRRX1,2:-0.371414057698;MTE{core}:-0.420429556588;FOXQ1:-0.425892991008;SRF:-0.433161368813;HLF:-0.442824436196;CEBPA,B_DDIT3:-0.444494671289;POU3F1..4:-0.445222572431;SPZ1:-0.450160791383;HNF4A_NR2F1,2:-0.478272946678;AR:-0.479388128286;NANOG:-0.505686947514;HNF1A:-0.507434918993;PPARG:-0.524489188211;GCM1,2:-0.564902359013;PATZ1:-0.575086661928;TFDP1:-0.605744707048;FOXM1:-0.613649619919;SOX17:-0.622018946582;ZNF143:-0.631662669645;NHLH1,2:-0.632037118597;PAX5:-0.649172544276;ALX4:-0.6723237626;SOX{8,9,10}:-0.704441747685;bHLH_family:-0.708152804916;TAL1_TCF{3,4,12}:-0.742366471593;GLI1..3:-0.748530073319;ALX1:-0.788408071208;FOXD3:-0.820462046768;GATA4:-0.830613070802;MEF2{A,B,C,D}:-0.847599791669;HOX{A5,B5}:-0.863690755514;MTF1:-0.871986481831;LHX3,4:-0.873016600889;RBPJ:-0.87700144953;NFE2L2:-0.899053492713;MAZ:-0.900603022547;FOXL1:-0.924233214022;RXRA_VDR{dimer}:-0.952215812222;MYBL2:-0.958894577516;ADNP_IRX_SIX_ZHX:-0.976953861888;ZBTB6:-0.984066060096;PAX8:-1.01214073724;TEF:-1.0170106973;GFI1:-1.04441546258;REST:-1.04825544233;SP1:-1.12785327255;HAND1,2:-1.15974374257;PRDM1:-1.16488079467;TFAP2B:-1.20537566273;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.25254132953;ZNF148:-1.26627156971;POU6F1:-1.30766403317;ZNF238:-1.3226407128;CDC5L:-1.32762815054;GFI1B:-1.35732748682;TP53:-1.3603918792;NR1H4:-1.39911058634;TBP:-1.41020958791;HIC1:-1.42837168547;GTF2A1,2:-1.47560003059;TFCP2:-1.48290080351;XCPE1{core}:-1.48508899271;ZIC1..3:-1.48560146306;UFEwm:-1.48975691924;POU5F1:-1.4930831633;ARID5B:-1.49458626892;ONECUT1,2:-1.51412779532;ZNF423:-1.5369242083;NKX2-3_NKX2-5:-1.55106337799;HSF1,2:-1.58778567201;TFAP4:-1.59850948855;GTF2I:-1.60144597391;TFAP2{A,C}:-1.61972855417;XBP1:-1.63441206139;NR6A1:-1.65324104167;EN1,2:-1.65928996628;TEAD1:-1.66905331135;TLX1..3_NFIC{dimer}:-1.67686538662;HOX{A4,D4}:-1.7554840268;KLF4:-1.81509263935;ESRRA:-1.83643036443;NR3C1:-2.06163015537;EBF1:-2.24441034995;GZF1:-2.28279954999;RXR{A,B,G}:-2.28849676601;NKX3-2:-2.34527933139;ESR1:-2.59610362318;IKZF1:-2.69673432008;PAX1,9:-2.79270781061 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11225-116C1;search_select_hide=table117:FF:11225-116C1 | |||
}} | }} | ||
Latest revision as of 16:25, 3 June 2020
| Name: | CD4+ T Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10853 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10853
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10853
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.847 |
| 10 | 10 | 0.0173 |
| 100 | 100 | 0.857 |
| 101 | 101 | 0.148 |
| 102 | 102 | 0.874 |
| 103 | 103 | 0.459 |
| 104 | 104 | 0.956 |
| 105 | 105 | 0.532 |
| 106 | 106 | 0.718 |
| 107 | 107 | 0.00919 |
| 108 | 108 | 0.458 |
| 109 | 109 | 0.929 |
| 11 | 11 | 0.699 |
| 110 | 110 | 0.429 |
| 111 | 111 | 0.754 |
| 112 | 112 | 0.708 |
| 113 | 113 | 0.282 |
| 114 | 114 | 0.963 |
| 115 | 115 | 0.227 |
| 116 | 116 | 0.154 |
| 117 | 117 | 0.00911 |
| 118 | 118 | 0.616 |
| 119 | 119 | 0.181 |
| 12 | 12 | 0.715 |
| 120 | 120 | 0.359 |
| 121 | 121 | 0.485 |
| 122 | 122 | 0.946 |
| 123 | 123 | 1.38178e-5 |
| 124 | 124 | 0.818 |
| 125 | 125 | 0.501 |
| 126 | 126 | 0.862 |
| 127 | 127 | 0.415 |
| 128 | 128 | 0.536 |
| 129 | 129 | 0.416 |
| 13 | 13 | 0.723 |
| 130 | 130 | 0.292 |
| 131 | 131 | 0.567 |
| 132 | 132 | 0.281 |
| 133 | 133 | 0.712 |
| 134 | 134 | 0.946 |
| 135 | 135 | 0.245 |
| 136 | 136 | 0.925 |
| 137 | 137 | 0.0264 |
| 138 | 138 | 0.658 |
| 139 | 139 | 0.168 |
| 14 | 14 | 0.674 |
| 140 | 140 | 0.386 |
| 141 | 141 | 0.727 |
| 142 | 142 | 0.321 |
| 143 | 143 | 0.0874 |
| 144 | 144 | 0.815 |
| 145 | 145 | 0.729 |
| 146 | 146 | 0.537 |
| 147 | 147 | 0.0193 |
| 148 | 148 | 0.455 |
| 149 | 149 | 0.194 |
| 15 | 15 | 0.456 |
| 150 | 150 | 0.715 |
| 151 | 151 | 0.641 |
| 152 | 152 | 0.229 |
| 153 | 153 | 0.444 |
| 154 | 154 | 0.127 |
| 155 | 155 | 0.0544 |
| 156 | 156 | 0.904 |
| 157 | 157 | 0.588 |
| 158 | 158 | 0.00457 |
| 159 | 159 | 0.96 |
| 16 | 16 | 0.219 |
| 160 | 160 | 0.0936 |
| 161 | 161 | 0.652 |
| 162 | 162 | 0.0226 |
| 163 | 163 | 0.794 |
| 164 | 164 | 0.171 |
| 165 | 165 | 0.965 |
| 166 | 166 | 0.293 |
| 167 | 167 | 0.136 |
| 168 | 168 | 0.562 |
| 169 | 169 | 0.1 |
| 17 | 17 | 0.582 |
| 18 | 18 | 0.494 |
| 19 | 19 | 0.0235 |
| 2 | 2 | 0.129 |
| 20 | 20 | 0.178 |
| 21 | 21 | 0.723 |
| 22 | 22 | 0.188 |
| 23 | 23 | 0.43 |
| 24 | 24 | 0.55 |
| 25 | 25 | 0.218 |
| 26 | 26 | 0.848 |
| 27 | 27 | 0.654 |
| 28 | 28 | 0.401 |
| 29 | 29 | 0.161 |
| 3 | 3 | 0.445 |
| 30 | 30 | 0.039 |
| 31 | 31 | 0.462 |
| 32 | 32 | 0.00196 |
| 33 | 33 | 0.555 |
| 34 | 34 | 0.24 |
| 35 | 35 | 0.242 |
| 36 | 36 | 0.119 |
| 37 | 37 | 0.789 |
| 38 | 38 | 0.652 |
| 39 | 39 | 0.27 |
| 4 | 4 | 0.933 |
| 40 | 40 | 0.417 |
| 41 | 41 | 0.201 |
| 42 | 42 | 0.184 |
| 43 | 43 | 0.813 |
| 44 | 44 | 0.548 |
| 45 | 45 | 0.136 |
| 46 | 46 | 0.918 |
| 47 | 47 | 0.538 |
| 48 | 48 | 0.938 |
| 49 | 49 | 0.176 |
| 5 | 5 | 0.715 |
| 50 | 50 | 0.483 |
| 51 | 51 | 0.827 |
| 52 | 52 | 0.586 |
| 53 | 53 | 0.234 |
| 54 | 54 | 0.833 |
| 55 | 55 | 0.909 |
| 56 | 56 | 0.761 |
| 57 | 57 | 0.785 |
| 58 | 58 | 0.248 |
| 59 | 59 | 0.153 |
| 6 | 6 | 0.973 |
| 60 | 60 | 0.814 |
| 61 | 61 | 0.218 |
| 62 | 62 | 0.379 |
| 63 | 63 | 0.802 |
| 64 | 64 | 0.993 |
| 65 | 65 | 0.396 |
| 66 | 66 | 0.782 |
| 67 | 67 | 0.47 |
| 68 | 68 | 0.574 |
| 69 | 69 | 0.496 |
| 7 | 7 | 0.721 |
| 70 | 70 | 0.169 |
| 71 | 71 | 0.356 |
| 72 | 72 | 0.586 |
| 73 | 73 | 0.452 |
| 74 | 74 | 0.969 |
| 75 | 75 | 0.0929 |
| 76 | 76 | 0.073 |
| 77 | 77 | 0.00437 |
| 78 | 78 | 0.765 |
| 79 | 79 | 0.959 |
| 8 | 8 | 0.311 |
| 80 | 80 | 0.0727 |
| 81 | 81 | 0.979 |
| 82 | 82 | 0.604 |
| 83 | 83 | 0.771 |
| 84 | 84 | 0.19 |
| 85 | 85 | 0.539 |
| 86 | 86 | 0.208 |
| 87 | 87 | 0.291 |
| 88 | 88 | 0.964 |
| 89 | 89 | 0.00312 |
| 9 | 9 | 0.564 |
| 90 | 90 | 0.121 |
| 91 | 91 | 0.785 |
| 92 | 92 | 0.996 |
| 93 | 93 | 0.871 |
| 94 | 94 | 0.466 |
| 95 | 95 | 0.629 |
| 96 | 96 | 0.884 |
| 97 | 97 | 0.348 |
| 98 | 98 | 0.471 |
| 99 | 99 | 2.77473e-5 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10853
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000031 CD4-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000624 (CD4-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000031 (CD4-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
