FFCP PHASE1:Hg19::chr6:142729306..142729321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:142729306..142729321,+ | |||
|coexpression_cluster_id=C1679 | |coexpression_cluster_id=C1679 | ||
|description=CAGE_peak_at_chr6:142729306..142729321,+ | |description=CAGE_peak_at_chr6:142729306..142729321,+ | ||
|id=chr6:142729306..142729321,+ | |id=chr6:142729306..142729321,+ | ||
|ontology_enrichment_celltype=CL:0000115;8.96e-24;36!CL:0002618;1.04e-23;3!CL:0002543;1.34e-20;6!CL:0002139;1.19e-19;24!CL:0002188;8.93e-15;5!CL:0002078;1.71e-14;45!CL:0002138;9.64e-13;6!CL:1000746;1.05e-10;7!CL:1000612;1.05e-10;7!CL:0000071;1.98e-10;18!CL:0000213;8.39e-10;58!CL:0000215;8.39e-10;58 | |ontology_enrichment_celltype=CL:0002139!4.59e-21!24;CL:0000115!6.06e-20!35;CL:0005020!1.96e-15!6;CL:0002138!1.96e-15!6;CL:0005022!1.96e-15!6;CL:0002078!7.83e-15!44;CL:0000213!1.21e-11!57;CL:0000215!1.21e-11!57;CL:0002543!3.07e-11!6;CL:0000071!3.11e-10!18;CL:0002546!3.11e-10!18;CL:0002618!4.59e-09!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000115;8.96e-24;36!CL:0002618;1.04e-23;3!CL:0002543;1.34e-20;6!CL:0002139;1.19e-19;24!CL:0002188;8.93e-15;5!CL:0002078;1.71e-14;45!CL:0002138;9.64e-13;6!CL:1000746;1.05e-10;7!CL:1000612;1.05e-10;7!CL:0000071;1.98e-10;18!CL:0000213;8.39e-10;58!CL:0000215;8.39e-10;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.12e-29,36;CL:0002618,8.55e-24,3;CL:0002078,8.49e-23,45;CL:0002543,1.12e-20,6;CL:0002139,1.03e-19,24;CL:0000213,3.24e-17,58;CL:0000215,3.24e-17,58;CL:0002188,8.33e-15,5;CL:0005020,9.46e-13,6;CL:0002138,9.46e-13,6;CL:0005022,9.46e-13,6;CL:1000746,9.99e-11,7;CL:1000612,9.99e-11,7;CL:0000071,1.77e-10,18;CL:0002546,1.77e-10,18;CL:0000222,3.73e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;9.64e-13;6!CL:0002546;1.98e-10;18!UBERON:0006242;3.05e-09;1!UBERON:0000358;4.54e-09;1!UBERON:0010115;8.49e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002066;1.79e-14;5!UBERON:0001638;8.17e-14;9!UBERON:0003920;8.17e-14;9!UBERON:0004582;8.17e-14;9!UBERON:0000074;1.05e-10;7!UBERON:0001229;1.05e-10;7!UBERON:0004638;1.98e-10;18!UBERON:0001986;1.98e-10;18!UBERON:0004852;1.98e-10;18!UBERON:0001473;1.11e-09;8!UBERON:0004536;1.11e-09;8!UBERON:0006558;1.11e-09;8!UBERON:0002171;2.50e-09;1!UBERON:0006518;2.50e-09;1!UBERON:0008949;2.50e-09;1!UBERON:0000101;2.50e-09;1!UBERON:0002167;2.50e-09;1!UBERON:0002363;8.49e-09;1!UBERON:0000353;1.50e-08;15!UBERON:0000487;1.68e-08;22!UBERON:0010260;2.87e-08;9!UBERON:0002465;7.83e-08;10!UBERON:0006914;1.85e-07;25 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-12!115;UBERON:0001473!2.30e-11!8;UBERON:0004536!2.30e-11!8;UBERON:0006558!2.30e-11!8;UBERON:0001986!3.11e-10!18;UBERON:0004638!3.11e-10!18;UBERON:0004852!3.11e-10!18;UBERON:0001638!5.30e-10!9;UBERON:0003920!5.30e-10!9;UBERON:0004582!5.30e-10!9;UBERON:0002465!6.34e-09!10;UBERON:0002066!1.04e-08!5;UBERON:0000487!4.94e-08!22;UBERON:0000477!4.16e-07!286;UBERON:0001155!6.40e-07!9;UBERON:0006914!7.49e-07!25;UBERON:0004111!8.34e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;1.79e-14;5!UBERON:0001638;8.17e-14;9!UBERON:0003920;8.17e-14;9!UBERON:0004582;8.17e-14;9!UBERON:0000074;1.05e-10;7!UBERON:0001229;1.05e-10;7!UBERON:0004638;1.98e-10;18!UBERON:0001986;1.98e-10;18!UBERON:0004852;1.98e-10;18!UBERON:0001473;1.11e-09;8!UBERON:0004536;1.11e-09;8!UBERON:0006558;1.11e-09;8!UBERON:0002171;2.50e-09;1!UBERON:0006518;2.50e-09;1!UBERON:0008949;2.50e-09;1!UBERON:0000101;2.50e-09;1!UBERON:0002167;2.50e-09;1!UBERON:0002363;8.49e-09;1!UBERON:0000353;1.50e-08;15!UBERON:0000487;1.68e-08;22!UBERON:0010260;2.87e-08;9!UBERON:0002465;7.83e-08;10!UBERON:0006914;1.85e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,1.60e-14,5;UBERON:0001638,7.27e-14,9;UBERON:0003920,7.27e-14,9;UBERON:0004582,7.27e-14,9;UBERON:0010532,9.99e-11,7;UBERON:0000074,9.99e-11,7;UBERON:0001229,9.99e-11,7;UBERON:0001230,9.99e-11,7;UBERON:0003220,9.99e-11,7;UBERON:0005749,9.99e-11,7;UBERON:0004199,9.99e-11,7;UBERON:0004209,9.99e-11,7;UBERON:0004198,9.99e-11,7;UBERON:0004638,1.77e-10,18;UBERON:0001986,1.77e-10,18;UBERON:0004852,1.77e-10,18;UBERON:0001473,1.10e-09,8;UBERON:0004536,1.10e-09,8;UBERON:0006558,1.10e-09,8;UBERON:0005103,1.90e-09,8;UBERON:0000083,1.90e-09,8;UBERON:0009201,1.90e-09,8;UBERON:0006553,1.90e-09,8;UBERON:0003074,1.90e-09,8;UBERON:0003060,1.90e-09,8;UBERON:0002171,2.40e-09,1;UBERON:0006518,2.40e-09,1;UBERON:0008949,2.40e-09,1;UBERON:0000101,2.40e-09,1;UBERON:0002167,2.40e-09,1;UBERON:0002363,8.49e-09,1;UBERON:0007645,8.49e-09,1;UBERON:0007647,8.49e-09,1;UBERON:0010115,8.49e-09,1;UBERON:0000353,1.51e-08,15;UBERON:0000487,1.53e-08,22;UBERON:0000080,1.89e-08,9;UBERON:0002120,1.89e-08,9;UBERON:0004875,1.89e-08,9;UBERON:0005721,1.89e-08,9;UBERON:0005754,1.89e-08,9;UBERON:0007297,1.89e-08,9;UBERON:0010260,2.70e-08,9;UBERON:0000055,6.61e-08,68;UBERON:0002465,7.75e-08,10;UBERON:0006914,1.71e-07,25;UBERON:0004876,5.42e-07,11;UBERON:0000058,9.09e-07,19 | |||
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| ||
|short_description=p@chr6:142729306..142729321,+ | |short_description=p@chr6:142729306..142729321,+ | ||
}} | }} |
Latest revision as of 20:20, 30 July 2015
Short description: | p@chr6:142729306..142729321, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:142729306..142729321, + |
Coexpression cluster: | C1679_Endothelial_retina_Hepatic_lung_Renal_kidney_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.12e-29 | 36 |
endothelial cell of umbilical vein | 8.55e-24 | 3 |
meso-epithelial cell | 8.49e-23 | 45 |
vein endothelial cell | 1.12e-20 | 6 |
endothelial cell of vascular tree | 1.03e-19 | 24 |
lining cell | 3.24e-17 | 58 |
barrier cell | 3.24e-17 | 58 |
glomerular endothelial cell | 8.33e-15 | 5 |
lymphangioblast | 9.46e-13 | 6 |
endothelial cell of lymphatic vessel | 9.46e-13 | 6 |
vascular lymphangioblast | 9.46e-13 | 6 |
glomerular cell | 9.99e-11 | 7 |
kidney corpuscule cell | 9.99e-11 | 7 |
blood vessel endothelial cell | 1.77e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.77e-10 | 18 |
mesodermal cell | 3.73e-07 | 121 |