FFCP PHASE1:Hg19::chr15:45726956..45726960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45726956..45726960,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:45726956..45726960,+ | |description=CAGE_peak_at_chr15:45726956..45726960,+ | ||
|id=chr15:45726956..45726960,+ | |id=chr15:45726956..45726960,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.25e-48;33!CL:0002057;1.25e-48;33!CL:0000473;8.16e-35;39!CL:0000234;8.16e-35;39!CL:0000576;3.95e-29;48!CL:0000766;1.35e-14;69!CL:0000763;2.79e-09;100!CL:0002087;4.31e-08;104 | |ontology_enrichment_celltype=CL:0002057!5.02e-38!42;CL:0000860!7.43e-35!45;CL:0000557!4.49e-30!71;CL:0002009!6.13e-30!65;CL:0002194!4.93e-27!63;CL:0000576!4.93e-27!63;CL:0000040!4.93e-27!63;CL:0000559!4.93e-27!63;CL:0000839!1.05e-26!70;CL:0000766!1.18e-25!76;CL:0000763!1.82e-16!112;CL:0000049!1.82e-16!112;CL:0002031!1.26e-15!124;CL:0000738!1.89e-15!140;CL:0002087!1.86e-14!119;CL:0000037!1.67e-10!172;CL:0000566!1.67e-10!172;CL:0002032!5.63e-10!165;CL:0000837!5.63e-10!165;CL:0000988!2.41e-09!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.25e-48;33!CL:0002057;1.25e-48;33!CL:0000473;8.16e-35;39!CL:0000234;8.16e-35;39!CL:0000576;3.95e-29;48!CL:0000766;1.35e-14;69!CL:0000763;2.79e-09;100!CL:0002087;4.31e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.92e-54,42;CL:0002057,1.92e-54,42;CL:0000473,2.74e-47,48;CL:0000234,2.74e-47,48;CL:0002194,2.88e-37,59;CL:0000576,2.88e-37,59;CL:0000040,2.88e-37,59;CL:0000559,2.88e-37,59;CL:0002009,5.67e-36,61;CL:0000766,4.56e-34,72;CL:0000839,4.48e-33,66;CL:0000557,1.51e-32,67;CL:0000763,8.21e-22,108;CL:0000049,8.21e-22,108;CL:0002087,7.18e-18,115;CL:0002031,5.21e-17,120;CL:0000738,1.02e-16,136;CL:0002032,1.18e-13,161;CL:0000837,1.18e-13,161;CL:0000037,5.86e-13,168;CL:0000988,3.83e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-36;42!UBERON:0005425;7.82e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000941;7.82e-10;1!UBERON:0001785;7.82e-10;1!UBERON:0002464;7.82e-10;1!UBERON:0004904;7.82e-10;1!UBERON:0001021;7.82e-10;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.74e-25!80;UBERON:0001474!5.73e-23!86;UBERON:0002390!1.67e-21!102;UBERON:0003061!1.67e-21!102;UBERON:0004765!1.59e-20!101;UBERON:0001434!1.59e-20!101;UBERON:0002193!1.39e-18!112;UBERON:0002405!1.35e-15!115;UBERON:0002204!1.72e-10!167;UBERON:0003081!2.15e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.82e-10;1!UBERON:0001785;7.82e-10;1!UBERON:0002464;7.82e-10;1!UBERON:0004904;7.82e-10;1!UBERON:0001021;7.82e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-28,76;UBERON:0001474,3.83e-26,82;UBERON:0004765,1.37e-23,90;UBERON:0002405,9.63e-23,93;UBERON:0002390,1.91e-21,98;UBERON:0003061,1.91e-21,98;UBERON:0001434,5.80e-21,100;UBERON:0002193,3.30e-19,108;UBERON:0002204,2.06e-11,167;UBERON:0000941,6.31e-10,1;UBERON:0001785,6.31e-10,1;UBERON:0002464,6.31e-10,1;UBERON:0004904,6.31e-10,1;UBERON:0001021,6.31e-10,1;UBERON:0003902,6.31e-10,1;UBERON:0005425,6.31e-10,1;UBERON:0003081,7.29e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,2.21598163412751,1.40381113229099,0.217010870715852,0,0,0,0.145398238779565,0,0.485168122375632,1.85943229524548,0.411167888021826,2.47765096716083,2.01384674625505,0,0.709446689665756,3.44745680736619,0.645484683583826,1.35426486594342,0.564727018627814,1.36453075028923,0.449446968890169,5.20342617030534,0.962787081228281,2.55734850319616,0,0.398927315243264,0,4.64334781805734,2.26954089876456,1.24564449799115,1.25624332628372,1.0429658368404,0.434377689410233,3.02699751316684,0.736555271975129,3.16462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,1.94826728407911,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.171488009437418,0,0,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr15:45726956..45726960,+ | |short_description=p@chr15:45726956..45726960,+ | ||
}} | }} |
Latest revision as of 02:01, 25 July 2015
Short description: | p@chr15:45726956..45726960, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45726956..45726960, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.92e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-54 | 42 |
defensive cell | 2.74e-47 | 48 |
phagocyte | 2.74e-47 | 48 |
monopoietic cell | 2.88e-37 | 59 |
monocyte | 2.88e-37 | 59 |
monoblast | 2.88e-37 | 59 |
promonocyte | 2.88e-37 | 59 |
macrophage dendritic cell progenitor | 5.67e-36 | 61 |
myeloid leukocyte | 4.56e-34 | 72 |
myeloid lineage restricted progenitor cell | 4.48e-33 | 66 |
granulocyte monocyte progenitor cell | 1.51e-32 | 67 |
myeloid cell | 8.21e-22 | 108 |
common myeloid progenitor | 8.21e-22 | 108 |
nongranular leukocyte | 7.18e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.21e-17 | 120 |
leukocyte | 1.02e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.18e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-13 | 161 |
hematopoietic stem cell | 5.86e-13 | 168 |
hematopoietic cell | 3.83e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.09e-28 | 76 |
bone element | 3.83e-26 | 82 |
skeletal element | 1.37e-23 | 90 |
immune system | 9.63e-23 | 93 |
hematopoietic system | 1.91e-21 | 98 |
blood island | 1.91e-21 | 98 |
skeletal system | 5.80e-21 | 100 |
hemolymphoid system | 3.30e-19 | 108 |
musculoskeletal system | 2.06e-11 | 167 |
cranial nerve II | 6.31e-10 | 1 |
cranial nerve | 6.31e-10 | 1 |
nerve trunk | 6.31e-10 | 1 |
nerve connecting eye with brain | 6.31e-10 | 1 |
nerve | 6.31e-10 | 1 |
retinal neural layer | 6.31e-10 | 1 |
presumptive neural retina | 6.31e-10 | 1 |
lateral plate mesoderm | 7.29e-09 | 203 |