FFCP PHASE1:Hg19::chr19:51869592..51869650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2109 | |EntrezGene=2109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3482 | |HGNC=3482 | ||
|TSSclassifier=strong | |||
|UniProt=P38117 | |UniProt=P38117 | ||
|association_with_transcript=21bp_to_ENST00000309244,NM_001985,uc002pwh.2_5end | |association_with_transcript=21bp_to_ENST00000309244,NM_001985,uc002pwh.2_5end | ||
|cluster_id=chr19:51869592..51869650,- | |||
|description=CAGE_peak_1_at_ETFB_5end | |description=CAGE_peak_1_at_ETFB_5end | ||
|id=chr19:51869592..51869650,- | |id=chr19:51869592..51869650,- | ||
|ontology_enrichment_celltype=CL:0000359;1.34e-09;32!CL:0000187;1.45e-09;55!CL:0000192;2.45e-09;43!CL:0000136;7.51e-07;13 | |ontology_enrichment_celltype=CL:0000183!6.79e-17!59;CL:0000680!5.03e-16!57;CL:0000056!5.03e-16!57;CL:0000355!5.03e-16!57;CL:0000055!2.20e-15!180;CL:0000187!4.04e-15!54;CL:0000192!3.00e-12!42;CL:0000514!3.00e-12!42;CL:0000393!1.35e-11!60;CL:0000211!1.35e-11!60;CL:0000359!4.49e-10!32;CL:0000222!5.81e-09!119;CL:0000220!4.98e-08!246;CL:0002321!1.06e-07!248;CL:0000136!2.28e-07!15 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;1.34e-09;32!CL:0000187;1.45e-09;55!CL:0000192;2.45e-09;43!CL:0000136;7.51e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.76e-16,58;CL:0000056,1.76e-16,58;CL:0000355,1.76e-16,58;CL:0000187,1.42e-15,55;CL:0000192,1.07e-12,43;CL:0000514,1.07e-12,43;CL:0000393,5.24e-12,61;CL:0000211,5.24e-12,61;CL:0000359,4.49e-10,32;CL:0000222,1.87e-09,121;CL:0002321,4.37e-08,250;CL:0000136,2.28e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.45e-09;43!CL:0000355;3.08e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007100;6.80e-09;25!UBERON:0002365;1.97e-07;31!UBERON:0002330;1.97e-07;31!UBERON:0000948;3.62e-07;22!UBERON:0002385;4.36e-07;31!UBERON:0001015;4.36e-07;31!UBERON:0000383;4.36e-07;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.34e-23!238;UBERON:0009142!2.34e-23!238;UBERON:0000481!1.56e-21!347;UBERON:0004290!1.16e-19!70;UBERON:0005256!2.67e-19!143;UBERON:0000914!1.09e-18!83;UBERON:0002329!1.09e-18!83;UBERON:0003077!1.09e-18!83;UBERON:0003059!1.09e-18!83;UBERON:0007282!1.09e-18!83;UBERON:0009618!1.09e-18!83;UBERON:0007285!1.09e-18!83;UBERON:0002100!1.54e-18!216;UBERON:0001134!9.92e-17!61;UBERON:0002036!9.92e-17!61;UBERON:0003082!9.92e-17!61;UBERON:0002385!1.45e-16!63;UBERON:0001015!1.45e-16!63;UBERON:0000383!1.45e-16!63;UBERON:0000475!3.21e-16!365;UBERON:0000486!3.63e-16!82;UBERON:0000490!4.21e-16!138;UBERON:0003914!6.54e-15!118;UBERON:0000119!8.47e-14!312;UBERON:0000483!1.27e-13!309;UBERON:0001048!2.05e-10!168;UBERON:0007100!1.19e-09!27;UBERON:0001041!5.15e-09!98;UBERON:0000477!7.03e-09!286;UBERON:0004872!2.51e-08!84;UBERON:0004921!5.81e-08!129;UBERON:0004185!5.81e-08!129;UBERON:0000948!6.52e-08!24;UBERON:0005498!6.52e-08!24;UBERON:0004140!6.52e-08!24;UBERON:0009881!6.52e-08!24;UBERON:0004141!6.52e-08!24;UBERON:0003084!6.52e-08!24;UBERON:0007005!6.52e-08!24;UBERON:0004139!6.52e-08!24;UBERON:0004291!6.52e-08!24;UBERON:0002049!1.34e-07!79;UBERON:0007798!1.34e-07!79;UBERON:0003103!1.45e-07!69;UBERON:0002365!1.54e-07!31;UBERON:0002330!1.54e-07!31;UBERON:0009569!1.65e-07!113;UBERON:0000077!2.32e-07!130;UBERON:0001007!2.33e-07!155;UBERON:0001555!2.33e-07!155;UBERON:0007026!2.33e-07!155;UBERON:0001637!3.83e-07!42;UBERON:0003509!3.83e-07!42;UBERON:0004572!3.83e-07!42;UBERON:0003102!6.41e-07!95;UBERON:0004111!8.37e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.80e-09;25!UBERON:0002365;1.97e-07;31!UBERON:0002330;1.97e-07;31!UBERON:0000948;3.62e-07;22!UBERON:0002385;4.36e-07;31!UBERON:0001015;4.36e-07;31!UBERON:0000383;4.36e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.30e-21,78;UBERON:0003104,1.05e-20,160;UBERON:0009142,1.05e-20,160;UBERON:0005256,1.60e-20,122;UBERON:0002329,3.97e-20,71;UBERON:0003059,3.97e-20,71;UBERON:0007282,3.97e-20,71;UBERON:0004290,3.97e-20,71;UBERON:0009618,3.97e-20,71;UBERON:0003077,6.53e-20,72;UBERON:0007285,6.53e-20,72;UBERON:0007524,8.46e-20,73;UBERON:0000490,3.48e-19,148;UBERON:0002100,3.79e-18,199;UBERON:0001134,3.47e-17,62;UBERON:0002036,3.47e-17,62;UBERON:0003082,3.47e-17,62;UBERON:0002385,5.12e-17,64;UBERON:0001015,5.12e-17,64;UBERON:0000383,5.12e-17,64;UBERON:0000486,1.35e-16,83;UBERON:0000119,4.16e-15,309;UBERON:0000483,6.29e-15,306;UBERON:0003914,1.57e-14,117;UBERON:0001048,5.24e-11,160;UBERON:0007100,1.19e-09,27;UBERON:0001041,6.16e-09,87;UBERON:0004872,1.83e-08,83;UBERON:0000948,6.52e-08,24;UBERON:0005498,6.52e-08,24;UBERON:0004140,6.52e-08,24;UBERON:0009881,6.52e-08,24;UBERON:0004141,6.52e-08,24;UBERON:0003084,6.52e-08,24;UBERON:0007005,6.52e-08,24;UBERON:0004139,6.52e-08,24;UBERON:0004291,6.52e-08,24;UBERON:0004921,9.83e-08,118;UBERON:0002049,9.86e-08,78;UBERON:0007798,9.86e-08,78;UBERON:0002365,1.54e-07,31;UBERON:0002330,1.54e-07,31;UBERON:0003103,3.08e-07,68;UBERON:0009569,3.54e-07,112;UBERON:0001637,3.83e-07,42;UBERON:0003509,3.83e-07,42;UBERON:0004572,3.83e-07,42;UBERON:0001007,4.26e-07,145;UBERON:0001555,4.26e-07,145;UBERON:0007026,4.26e-07,145;UBERON:0003102,5.36e-07,99;UBERON:0001009,9.14e-07,112 | |||
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221913476,32.6979862149298 | ||
|short_description=p1@ETFB | |short_description=p1@ETFB | ||
}} | }} |
Latest revision as of 14:34, 19 September 2015
Short description: | p1@ETFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETFB_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000309244, NM_001985, uc002pwh.2_5end |
EntrezGene: | ETFB |
HGNC: | 3482 |
UniProt: | P38117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.76e-16 | 58 |
myoblast | 1.76e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.76e-16 | 58 |
muscle cell | 1.42e-15 | 55 |
smooth muscle cell | 1.07e-12 | 43 |
smooth muscle myoblast | 1.07e-12 | 43 |
electrically responsive cell | 5.24e-12 | 61 |
electrically active cell | 5.24e-12 | 61 |
vascular associated smooth muscle cell | 4.49e-10 | 32 |
mesodermal cell | 1.87e-09 | 121 |
embryonic cell | 4.37e-08 | 250 |
fat cell | 2.28e-07 | 15 |