FFCP PHASE1:Hg19::chr2:182757484..182757503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:182757484..182757503,- | |||
|coexpression_cluster_id=C2675 | |coexpression_cluster_id=C2675 | ||
|description=CAGE_peak_at_chr2:182757484..182757503,- | |description=CAGE_peak_at_chr2:182757484..182757503,- | ||
|id=chr2:182757484..182757503,- | |id=chr2:182757484..182757503,- | ||
|ontology_enrichment_celltype=CL:0000860;1.23e-55;33!CL:0002057;1.23e-55;33!CL:0000576;6.99e-46;48!CL:0000473;3.43e-40;39!CL:0000234;3.43e-40;39!CL:0000766;2.50e-35;69!CL:0000763;5.37e-22;100!CL:0002393;2.56e-11;6!CL:0002397;2.56e-11;6!CL:0002087;1.47e-10;104!CL:0000738;2.16e-10;136!CL:0000094;3.16e-10;8!CL:0000988;9.56e-09;177!CL:0000071;1.44e-07;18!CL:0000097;3.58e-07;5!CL:0000081;4.04e-07;11!CL:0000875;6.51e-07;3!CL:0002396;6.51e-07;3 | |ontology_enrichment_celltype=CL:0000763!7.58e-42!112;CL:0000049!7.58e-42!112;CL:0000766!3.31e-34!76;CL:0000557!8.51e-33!71;CL:0000839!4.11e-30!70;CL:0002057!4.66e-30!42;CL:0000860!5.93e-30!45;CL:0002009!4.45e-29!65;CL:0000037!1.51e-28!172;CL:0000566!1.51e-28!172;CL:0002194!7.58e-28!63;CL:0000576!7.58e-28!63;CL:0000040!7.58e-28!63;CL:0000559!7.58e-28!63;CL:0002032!4.02e-27!165;CL:0000837!4.02e-27!165;CL:0000988!6.36e-27!182;CL:0000738!1.29e-20!140;CL:0002031!2.15e-16!124;CL:0002087!5.38e-15!119;CL:0000115!6.71e-09!35;CL:0002139!3.02e-08!24;CL:0002393!2.59e-07!9;CL:0002397!2.59e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.23e-55;33!CL:0002057;1.23e-55;33!CL:0000576;6.99e-46;48!CL:0000473;3.43e-40;39!CL:0000234;3.43e-40;39!CL:0000766;2.50e-35;69!CL:0000763;5.37e-22;100!CL:0002393;2.56e-11;6!CL:0002397;2.56e-11;6!CL:0002087;1.47e-10;104!CL:0000738;2.16e-10;136!CL:0000094;3.16e-10;8!CL:0000988;9.56e-09;177!CL:0000071;1.44e-07;18!CL:0000097;3.58e-07;5!CL:0000081;4.04e-07;11!CL:0000875;6.51e-07;3!CL:0002396;6.51e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000860,2.67e-77,42;CL:0002057,2.67e-77,42;CL:0000766,1.24e-72,72;CL:0000473,1.00e-68,48;CL:0000234,1.00e-68,48;CL:0000763,1.42e-68,108;CL:0000049,1.42e-68,108;CL:0000557,1.23e-67,67;CL:0000839,1.76e-60,66;CL:0002009,5.63e-60,61;CL:0002194,8.07e-57,59;CL:0000576,8.07e-57,59;CL:0000040,8.07e-57,59;CL:0000559,8.07e-57,59;CL:0000037,4.07e-44,168;CL:0000988,1.32e-43,177;CL:0002032,8.65e-41,161;CL:0000837,8.65e-41,161;CL:0000738,4.01e-39,136;CL:0002031,1.29e-30,120;CL:0002087,2.61e-26,115;CL:0002393,9.50e-17,9;CL:0002397,9.50e-17,9;CL:0000134,1.71e-11,354;CL:0002320,6.64e-11,361;CL:0000094,1.72e-10,8;CL:0000034,3.21e-09,441;CL:0000048,4.01e-09,427;CL:0000219,7.37e-09,386;CL:0000723,1.00e-08,433;CL:0000071,1.34e-07,18;CL:0002546,1.34e-07,18;CL:0000081,2.66e-07,11;CL:0000097,3.54e-07,5;CL:0002028,3.54e-07,5;CL:0000115,5.65e-07,36;CL:0000875,6.74e-07,3;CL:0002396,6.74e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0004638;1.44e-07;18!UBERON:0001986;1.44e-07;18!UBERON:0004852;1.44e-07;18!UBERON:0000487;4.45e-07;22 | |ontology_enrichment_development_v019=CL:0002057;7.10e-55;42!CL:0000049;9.17e-20;108!CL:0002546;1.44e-07;18 | ||
|ontology_enrichment_disease=DOID:8692!1.88e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.58e-29!112;UBERON:0002390!5.50e-28!102;UBERON:0003061!5.50e-28!102;UBERON:0002371!4.18e-27!80;UBERON:0001474!7.19e-24!86;UBERON:0002405!6.46e-22!115;UBERON:0003081!2.94e-18!216;UBERON:0004765!2.64e-17!101;UBERON:0001434!2.64e-17!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.44e-07;18!UBERON:0001986;1.44e-07;18!UBERON:0004852;1.44e-07;18!UBERON:0000487;4.45e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-60,76;UBERON:0002390,4.91e-59,98;UBERON:0003061,4.91e-59,98;UBERON:0001474,1.08e-54,82;UBERON:0002193,7.73e-54,108;UBERON:0002405,3.72e-50,93;UBERON:0004765,2.24e-48,90;UBERON:0001434,6.67e-42,100;UBERON:0003081,1.03e-38,203;UBERON:0002204,1.13e-23,167;UBERON:0000926,9.19e-19,315;UBERON:0004120,9.19e-19,315;UBERON:0006603,9.19e-19,315;UBERON:0002384,4.17e-10,371;UBERON:0004638,1.34e-07,18;UBERON:0001986,1.34e-07,18;UBERON:0004852,1.34e-07,18;UBERON:0000487,4.83e-07,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.376627918784408,0.229240217243854,0.0821005894499457,0.157421562627358,7.47392126012918,1.53531759238885,2.16742572642506,0.919421224478927,0.90361775633475,0,0,0,3.52320527201817,4.9859586767869,4.01088894940283,8.24641308720237,1.11957737119962,0.32389366601898,1.03030227053675,5.67053131240302,6.04601509902095,6.79235371325885,9.99444858694444,6.98985409637104,6.50383378879718,5.46615545412086,6.14785695669842,6.3850202069918,5.17118521104928,2.5819387343353,2.70852973188684,6.77672422353377,7.36846605156184,6.29225756446237,12.2433556948361,4.8139354061414,12.1474053901818,7.58657990429447,5.78444607102732,7.2458207590558,19.4440189881151,7.37600792098482,9.9651559839292,9.79869794501299,7.30076085788282,7.38442071997397,10.8971910474006,8.10210799172642,8.86094684834476,1.69004229049553,5.74031609905618,2.72556239160889,3.36985893439485,2.25265339262259,2.57160938715328,6.55529310604872,6.36533367037088,5.11459630540975,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,3.36305137788922,2.10707267820062,0,0,0,0.334372990781356,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0.493313713811028,0.552700035571697,0,0,0.267540828089713,0,0.453237370790265,0,0.68725489096526,0,0,0,0.950452044448374,0.150575119077773,0,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0.522389211897802,0.398873881556595,0.476981248610684,1.14398982156026,0,1.59009925893364,0.860234595106124,1.04142150482278,0,0.419499436209906,2.75118041940067,1.25396979922086,0.516833518338658,0.35576626268671,2.00832367658802,0.402829317109147,0,1.46437234528902,1.10298924103761,1.62028389576352,0.803697554556718,0.673588117878509,0.788280363383256,6.13266549863533,3.79706263827252,1.46561395144326,0,3.87780264148325,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0,0.653847612453835,0,0,0.468642863667593,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0.250237039743928,0.277064115484183,0,0,0,0.453728732640084,0.358779271377724,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0.292311015483596,0.757301322732344,0,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0.386521706326594,0,0.573609190778008,0,0.132529768321485,0,0.414644220061482,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.951270761172991,0,1.71697232418975,0.984868024349589,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0.492663237895943,2.3773077183571,11.6103744702832,15.7090749224488,10.4781219743895,0.444485260045183,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0.112085143993527,1.57624608161542,0,0.641715181398742,0.254094624222463,0,1.54657762555539,0,0,1.49801404789436,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0.82707210449155,3.8828556147351,2.13455115606889,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.863663664408557,3.08454505380579,0,0,0,0,0.447749509444357,0.438519753291869,0,0,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0.487426979262569,2.11300293513511,0,0,0,2.2054613741845,0,0,0,0,0.202910376962704,0.6196469961995,1.12678241012897,0.143411352204052,0,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,1.01489521846434,0,2.27858874869665,0.238231775457789,0.411362273086194,0,0,3.17250070517708,0,0,0.245040215981032,0.557409525377156,0,0.213425530045242,0,0.59873811429845,0.957526850661834,3.17510374085824,1.29848776109822,2.24637742490767,0.228234679033192,1.09675927041116,0,0.169291777801603,0.321176150207399,1.41259795033733,1.7033849507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| ||
|short_description=p@chr2:182757484..182757503,- | |short_description=p@chr2:182757484..182757503,- | ||
}} | }} |
Latest revision as of 04:00, 29 July 2015
Short description: | p@chr2:182757484..182757503, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:182757484..182757503, - |
Coexpression cluster: | C2675_Mast_CD14_immature_placenta_Basophils_Renal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-60 | 76 |
hematopoietic system | 4.91e-59 | 98 |
blood island | 4.91e-59 | 98 |
bone element | 1.08e-54 | 82 |
hemolymphoid system | 7.73e-54 | 108 |
immune system | 3.72e-50 | 93 |
skeletal element | 2.24e-48 | 90 |
skeletal system | 6.67e-42 | 100 |
lateral plate mesoderm | 1.03e-38 | 203 |
musculoskeletal system | 1.13e-23 | 167 |
mesoderm | 9.19e-19 | 315 |
mesoderm-derived structure | 9.19e-19 | 315 |
presumptive mesoderm | 9.19e-19 | 315 |
connective tissue | 4.17e-10 | 371 |
blood vessel endothelium | 1.34e-07 | 18 |
endothelium | 1.34e-07 | 18 |
cardiovascular system endothelium | 1.34e-07 | 18 |
simple squamous epithelium | 4.83e-07 | 22 |