FFCP PHASE1:Hg19::chr1:155948318..155948346,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:155948318..155948346,-
|short_description=p1@ARHGEF2
|description=CAGE_peak_1_at_ARHGEF2_5end
|association_with_transcript=0bp_to_ENST00000361247,NM_001162...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9181 | |EntrezGene=9181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |HGNC=682 | ||
|TSSclassifier=strong | |||
|UniProt=Q92974 | |UniProt=Q92974 | ||
|association_with_transcript=0bp_to_ENST00000361247,NM_001162383,NM_001162384,uc001fms.2,uc001fmt.2_5end | |||
|cluster_id=chr1:155948318..155948346,- | |||
|description=CAGE_peak_1_at_ARHGEF2_5end | |||
|id=chr1:155948318..155948346,- | |||
|ontology_enrichment_celltype=CL:0000037!1.28e-56!172;CL:0000566!1.28e-56!172;CL:0000988!2.17e-56!182;CL:0002032!3.71e-53!165;CL:0000837!3.71e-53!165;CL:0000738!4.46e-48!140;CL:0000763!2.51e-40!112;CL:0000049!2.51e-40!112;CL:0002087!3.60e-37!119;CL:0002031!8.27e-37!124;CL:0000766!2.20e-31!76;CL:0000557!2.61e-28!71;CL:0002009!1.36e-25!65;CL:0000839!1.59e-25!70;CL:0002194!5.03e-25!63;CL:0000576!5.03e-25!63;CL:0000040!5.03e-25!63;CL:0000559!5.03e-25!63;CL:0002057!2.65e-23!42;CL:0000860!3.43e-22!45;CL:0000134!3.90e-18!358;CL:0002320!2.69e-17!365;CL:0000048!2.41e-15!430;CL:0000219!3.68e-15!390;CL:0000034!5.25e-15!444;CL:0000723!1.02e-14!436;CL:0002371!6.71e-12!591;CL:0000542!2.77e-11!53;CL:0000051!2.77e-11!53;CL:0000003!6.79e-11!722;CL:0000838!7.55e-11!52;CL:0000144!1.44e-10!625;CL:0000945!2.49e-09!24;CL:0000826!2.49e-09!24;CL:0000115!3.25e-09!35;CL:0002078!1.44e-07!44;CL:0000236!4.33e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.85e-19;33!CL:0002057;6.85e-19;33!CL:0000576;9.20e-17;48!CL:0000473;3.50e-16;39!CL:0000234;3.50e-16;39!CL:0000766;2.93e-14;69!CL:0000763;7.42e-13;100!CL:0002087;1.05e-11;104!CL:0000738;2.35e-11;136!CL:0000988;3.89e-10;177!CL:0000945;2.46e-09;24!CL:0000115;6.50e-08;36!CL:0000542;4.87e-07;53!CL:0000236;4.94e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.98e-57,168;CL:0000988,7.08e-57,177;CL:0002032,8.71e-54,161;CL:0000837,8.71e-54,161;CL:0000738,8.09e-49,136;CL:0000763,3.56e-41,108;CL:0000049,3.56e-41,108;CL:0002087,7.26e-38,115;CL:0002031,1.89e-37,120;CL:0000766,1.80e-32,72;CL:0000557,2.33e-29,67;CL:0002009,1.23e-26,61;CL:0000839,1.83e-26,66;CL:0002194,4.41e-26,59;CL:0000576,4.41e-26,59;CL:0000040,4.41e-26,59;CL:0000559,4.41e-26,59;CL:0000473,1.67e-23,48;CL:0000234,1.67e-23,48;CL:0000860,2.65e-23,42;CL:0002057,2.65e-23,42;CL:0000134,5.82e-18,354;CL:0002320,4.02e-17,361;CL:0000048,3.48e-15,427;CL:0000219,5.57e-15,386;CL:0000034,7.66e-15,441;CL:0000723,1.47e-14,433;CL:0000542,2.77e-11,53;CL:0000051,2.77e-11,53;CL:0000838,7.55e-11,52;CL:0000945,2.49e-09,24;CL:0000826,2.49e-09,24;CL:0000115,3.03e-09,36;CL:0002078,1.25e-07,45;CL:0000236,4.33e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;4.60e-17;42!CL:0000049;9.85e-12;108!CL:0000051;4.87e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!2.17e-11!51;DOID:0060083!2.17e-11!51;DOID:1240!2.54e-10!39;DOID:8692!2.48e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.37e-09;31!DOID:1240;2.28e-08;39!DOID:2531;7.49e-07;51!DOID:0060083;7.49e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.17e-11,51;DOID:0060083,2.17e-11,51;DOID:1240,2.54e-10,39;DOID:8692,2.48e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.17e-36!112;UBERON:0002390!2.09e-34!102;UBERON:0003061!2.09e-34!102;UBERON:0002371!1.66e-26!80;UBERON:0001474!1.27e-25!86;UBERON:0003081!3.46e-23!216;UBERON:0002405!3.20e-22!115;UBERON:0004765!3.20e-18!101;UBERON:0001434!3.20e-18!101;UBERON:0002384!8.76e-17!375;UBERON:0002204!3.78e-09!167;UBERON:0000178!5.63e-07!15;UBERON:0000179!5.63e-07!15;UBERON:0000463!5.63e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.78e-07;15!UBERON:0000179;5.78e-07;15!UBERON:0000463;5.78e-07;15!UBERON:0002193;7.04e-07;42!UBERON:0002390;8.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.90e-37,108;UBERON:0002390,3.31e-35,98;UBERON:0003061,3.31e-35,98;UBERON:0002405,7.96e-31,93;UBERON:0002371,2.53e-27,76;UBERON:0001474,2.52e-26,82;UBERON:0003081,5.48e-22,203;UBERON:0004765,1.97e-20,90;UBERON:0001434,2.65e-17,100;UBERON:0002384,1.32e-16,371;UBERON:0002204,1.31e-08,167;UBERON:0000178,5.63e-07,15;UBERON:0000179,5.63e-07,15;UBERON:0000463,5.63e-07,15 | |||
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| ||
|short_description=p1@ARHGEF2 | |||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p1@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361247, NM_001162383, NM_001162384, uc001fms.2, uc001fmt.2_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | Q92974 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.90e-37 | 108 |
hematopoietic system | 3.31e-35 | 98 |
blood island | 3.31e-35 | 98 |
immune system | 7.96e-31 | 93 |
bone marrow | 2.53e-27 | 76 |
bone element | 2.52e-26 | 82 |
lateral plate mesoderm | 5.48e-22 | 203 |
skeletal element | 1.97e-20 | 90 |
skeletal system | 2.65e-17 | 100 |
connective tissue | 1.32e-16 | 371 |
musculoskeletal system | 1.31e-08 | 167 |
blood | 5.63e-07 | 15 |
haemolymphatic fluid | 5.63e-07 | 15 |
organism substance | 5.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.17e-11 | 51 |
immune system cancer | 2.17e-11 | 51 |
leukemia | 2.54e-10 | 39 |
myeloid leukemia | 2.48e-09 | 31 |