FFCP PHASE1:Hg19::chr17:40441330..40441344,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6776 | |EntrezGene=6776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11366 | |HGNC=11366 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_ENST00000478897_5end | |association_with_transcript=99bp_to_ENST00000478897_5end | ||
|cluster_id=chr17:40441330..40441344,+ | |||
|coexpression_cluster_id=C93 | |coexpression_cluster_id=C93 | ||
|description=CAGE_peak_9_at_STAT5A_5end | |description=CAGE_peak_9_at_STAT5A_5end | ||
|id=chr17:40441330..40441344,+ | |id=chr17:40441330..40441344,+ | ||
|ontology_enrichment_celltype=CL:0000988;7.65e-07;177 | |ontology_enrichment_celltype=CL:0000988!1.41e-19!182;CL:0000037!9.78e-17!172;CL:0000566!9.78e-17!172;CL:0002032!3.96e-15!165;CL:0000837!3.96e-15!165;CL:0000080!1.17e-11!6;CL:0000763!5.49e-10!112;CL:0000049!5.49e-10!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000988;7.65e-07;177 | ||
|ontology_enrichment_disease=DOID:8692;2.52e-41;31!DOID:1240;1.99e-31;39!DOID:1036;2.03e-27;8!DOID:2531;3.44e-24;51!DOID:0060083;3.44e-24;51!DOID:0060060;1.61e-14;1!DOID:0060061;1.61e-14;1!DOID:8691;1.61e-14;1!DOID:8552;2.75e-14;1 | |ontology_enrichment_celltype_v019_2=CL:0000988,3.07e-15,177;CL:0000763,4.59e-11,108;CL:0000049,4.59e-11,108;CL:0002032,2.18e-10,161;CL:0000837,2.18e-10,161;CL:0000037,6.76e-10,168 | ||
|ontology_enrichment_uberon=UBERON:0002331;1.30e-12;10!UBERON:0000178;1.35e-08;15!UBERON:0000179;1.35e-08;15!UBERON:0000463;1.35e-08;15 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!8.14e-21!31;DOID:1036!2.29e-19!8;DOID:1240!1.27e-18!39;DOID:2531!8.17e-18!51;DOID:0060083!8.17e-18!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.52e-41;31!DOID:1240;1.99e-31;39!DOID:1036;2.03e-27;8!DOID:2531;3.44e-24;51!DOID:0060083;3.44e-24;51!DOID:0060060;1.61e-14;1!DOID:0060061;1.61e-14;1!DOID:8691;1.61e-14;1!DOID:8552;2.75e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.50e-41,31;DOID:1240,9.69e-40,39;DOID:2531,6.55e-36,51;DOID:0060083,6.55e-36,51;DOID:1036,2.03e-27,8;DOID:0060060,2.11e-14,1;DOID:0060061,2.11e-14,1;DOID:8691,2.11e-14,1;DOID:8552,2.75e-14,1;DOID:0050686,1.91e-12,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.69e-13!15;UBERON:0000179!6.69e-13!15;UBERON:0000463!6.69e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.30e-12;10!UBERON:0000178;1.35e-08;15!UBERON:0000179;1.35e-08;15!UBERON:0000463;1.35e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.22e-12,10;UBERON:0000358,1.22e-12,10;UBERON:0000307,1.22e-12,10;UBERON:0000091,1.22e-12,10;UBERON:0000087,1.22e-12,10;UBERON:0007010,1.22e-12,10;UBERON:0007806,1.22e-12,10;UBERON:0008780,1.22e-12,10;UBERON:0005728,1.22e-12,10;UBERON:0000178,1.30e-08,15;UBERON:0000179,1.30e-08,15;UBERON:0000463,1.30e-08,15 | |||
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|short_description=p9@STAT5A | |short_description=p9@STAT5A | ||
}} | }} |
Latest revision as of 14:12, 24 September 2015
Short description: | p9@STAT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STAT5A_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 99bp_to_ENST00000478897_5end |
EntrezGene: | STAT5A |
HGNC: | 11366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.07e-15 | 177 |
myeloid cell | 4.59e-11 | 108 |
common myeloid progenitor | 4.59e-11 | 108 |
hematopoietic oligopotent progenitor cell | 2.18e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-10 | 161 |
hematopoietic stem cell | 6.76e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.22e-12 | 10 |
blastocyst | 1.22e-12 | 10 |
blastula | 1.22e-12 | 10 |
bilaminar disc | 1.22e-12 | 10 |
inner cell mass | 1.22e-12 | 10 |
cleaving embryo | 1.22e-12 | 10 |
connecting stalk | 1.22e-12 | 10 |
inner cell mass derived epiblast | 1.22e-12 | 10 |
extraembryonic mesoderm | 1.22e-12 | 10 |
blood | 1.30e-08 | 15 |
haemolymphatic fluid | 1.30e-08 | 15 |
organism substance | 1.30e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.50e-41 | 31 |
leukemia | 9.69e-40 | 39 |
hematologic cancer | 6.55e-36 | 51 |
immune system cancer | 6.55e-36 | 51 |
chronic leukemia | 2.03e-27 | 8 |
non-Hodgkin lymphoma | 2.11e-14 | 1 |
cutaneous T cell lymphoma | 2.11e-14 | 1 |
mycosis fungoides | 2.11e-14 | 1 |
chronic myeloid leukemia | 2.75e-14 | 1 |
organ system cancer | 1.91e-12 | 137 |