FFCP PHASE1:Hg19::chr1:156786530..156786622,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:156786530..156786622,-
|short_description=p1@SH2D2A
|description=CAGE_peak_1_at_SH2D2A_5end
|association_with_transcript=0bp_to_ENST00000495306_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9047 | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10821 | |HGNC=10821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495306_5end | |||
|cluster_id=chr1:156786530..156786622,- | |||
|description=CAGE_peak_1_at_SH2D2A_5end | |||
|id=chr1:156786530..156786622,- | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-33!172;CL:0000566!1.45e-33!172;CL:0000988!2.46e-32!182;CL:0002032!2.14e-30!165;CL:0000837!2.14e-30!165;CL:0000738!1.65e-29!140;CL:0002087!1.58e-24!119;CL:0002031!1.06e-22!124;CL:0000542!8.17e-19!53;CL:0000051!8.17e-19!53;CL:0000838!1.94e-18!52;CL:0000084!2.93e-17!25;CL:0000827!2.93e-17!25;CL:0000791!7.97e-14!18;CL:0000789!7.97e-14!18;CL:0002420!7.97e-14!18;CL:0002419!7.97e-14!18;CL:0000790!7.97e-14!18;CL:0000763!6.56e-13!112;CL:0000049!6.56e-13!112;CL:0000766!5.79e-10!76;CL:0002057!2.30e-09!42;CL:0000625!3.99e-09!11;CL:0000860!5.47e-09!45;CL:0000557!6.37e-08!71;CL:0000839!2.88e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.45e-21;25!CL:0000791;1.12e-16;18!CL:0000789;1.12e-16;18!CL:0002419;1.12e-16;18!CL:0000860;4.34e-11;33!CL:0002057;4.34e-11;33!CL:0000625;6.91e-11;11!CL:0002087;1.24e-10;104!CL:0000542;3.31e-10;53!CL:0000988;1.04e-07;177!CL:0000738;4.81e-07;136!CL:0000576;5.01e-07;48!CL:0000473;8.80e-07;39!CL:0000234;8.80e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.57e-35,168;CL:0000988,1.82e-34,177;CL:0002032,2.74e-31,161;CL:0000837,2.74e-31,161;CL:0000738,1.58e-30,136;CL:0002087,1.03e-24,115;CL:0002031,1.34e-22,120;CL:0000084,6.48e-21,25;CL:0000827,6.48e-21,25;CL:0000542,1.45e-18,53;CL:0000051,1.45e-18,53;CL:0000838,4.08e-18,52;CL:0000791,1.12e-16,18;CL:0000789,1.12e-16,18;CL:0002420,1.12e-16,18;CL:0002419,1.12e-16,18;CL:0000790,1.12e-16,18;CL:0000763,1.13e-13,108;CL:0000049,1.13e-13,108;CL:0000625,6.93e-11,11;CL:0000860,1.91e-10,42;CL:0002057,1.91e-10,42;CL:0000766,3.22e-10,72;CL:0000473,7.04e-08,48;CL:0000234,7.04e-08,48;CL:0000557,7.59e-08,67;CL:0000839,3.41e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-16;18!CL:0000051;3.31e-10;53!CL:0002057;1.88e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!2.42e-07!51;DOID:0060083!2.42e-07!51;DOID:1240!4.01e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.21e-14!102;UBERON:0003061!3.21e-14!102;UBERON:0007023!1.47e-13!115;UBERON:0002193!6.90e-12!112;UBERON:0000178!3.55e-11!15;UBERON:0000179!3.55e-11!15;UBERON:0000463!3.55e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.97e-13;15!UBERON:0000179;1.97e-13;15!UBERON:0000463;1.97e-13;15!UBERON:0002390;2.19e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.08e-16,98;UBERON:0003061,6.08e-16,98;UBERON:0002193,4.83e-14,108;UBERON:0000178,2.06e-13,15;UBERON:0000179,2.06e-13,15;UBERON:0000463,2.06e-13,15;UBERON:0007023,3.54e-08,114;UBERON:0002405,4.69e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,20.325965928955,14.1213013853907,15.5060239187948,42.0899776228327,72.9275856384704,20.1260960310899,4.59710612239464,15.3615018576908,7.02532619316897,0.154934401160603,0.142169232487422,1.46800219667424,17.1738576644882,29.4800337781108,35.155761055968,1.56740831967947,8.09734165047449,5.92423805558629,3.78035420826868,2.64513160582167,2.18325655069035,9.0647324393217,12.3350366406548,9.60089749774821,12.6584652621746,7.42866048934392,3.54723344832878,13.1003358679915,14.846147722428,14.8969135253776,9.78860165621544,12.0078706025452,4.04502272001152,15.9163624032869,13.1580901101198,8.95071976118658,2.63881040149373,4.58766412529753,0.426224750532694,10.7377418292576,10.7803192691317,4.9825779919646,10.5524439407832,10.429658368404,6.5156653411535,10.8971910474006,7.73383035573886,3.48108626184973,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,0,1.09227722252426,0.889509253863555,0.426730222566507,0,1.72425731986345,3.30522436392431,0.954053754535364,1.70763890732835,2.93618594685469,1.91136614062614,7.93027971474155,28.0254281490768,0.790152254325231,30.4900143676441,57.379571361378,61.4748482008533,43.635675296967,54.7549407944432,57.2871844939027,29.2240092611867,116.201106531236,76.8921418509325,59.8141515375777,72.5754354890242,100.807868624106,99.6254602308667,59.3620835619271,33.9910521876593,44.339872117463,36.6267811010289,25.6839194966125,35.5420780936921,58.4676208319442,91.5896979708592,83.1578418067964,63.5079426968952,52.563293363476,50.7845094008006,39.9189858668317,54.5081931061537,51.9625641286939,63.7146705416964,68.4286258407209,80.4705436982626,94.956776058849,129.441054759218,94.7151601393505,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0.790513071238134,5.63210024640164,3.64295288292542,1.11235332835329,0.649094787309367,0.348259474598534,0.664789802594326,0.953962497221368,2.28797964312051,2.22874500797739,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0,7.9068250461638,11.6334079244498,1.74437620857014,0,0,0,0,1.41867352879343,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,1.36221684880438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,13.7215205745941,27.2746120590835,6.30970109855808,0,0,0,0,0,0,0,0,5.52539685409922,0,0,0.473227200159376,0.168584690078102,2.41011029883482,0.882351781859152,1.08939722046203,2.13543557199987,1.07865046528132,0,2.30848294167834,0,0,0,0,0,1.96565443335525,2.95394953340702,42.8219206432211,0,0,9.32877425973317,25.8524032492525,11.6613607997492,1.38882667737794,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,6.56136837907439,7.55919576894868,4.11147782002921,1.16426079513703,3.77824120068151,1.15014803749563,256.677546943787,25.0938036937694,2.69526550203004,0.720599767084807,2.14612136824846,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0.2933531432838,0,0,0,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,61.9830846284206,117.036271559945,140.804806383265,153.883300499418,0,0,0,0,0,1.49801404789436,0,9.53155680902882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.0378623217387,39.9071271514441,92.1058823843725,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,1.55776328755086,0,0,0.200506470303285,0.736647911487171,0,0,0,0,0,0.784349769176855,0,0.105551628892876,1.13733384070897,0.510281115829547,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0,0,0,3.09123034943167,0,0,58.0008193376134,20.8019278731687,0,0,0,0,0,0,0.145016693914229,1.10794615640931,0,7.10725136052206,5.57351195358808,19.1419068741876,2.52894452138875,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,3.717881977197,0,0,0,0,0,1.05553817648832,0,0,0.349934720244983,13.0862073306696,10.0545341330368,20.6892871236513,1.97701981631236,2.58303223602738,3.36942951335251,2.66058092122005,2.06751060186264,52.7745513601456,35.9379487356916,33.0395368561014,42.1670242560287,33.3203441199817,33.0721388708286,33.4819491087631,61.8637637509531,0,0,0,5.945701604023,1.87549976869378,28.5278791827141,7.01475600006818,15.3676116003269,5.745161103971,21.5907054378361,0.649243880549111,2.80797178113459,0,0.94007937463814,0,3.72441911163527,0.642352300414798,0,0,2.74804275804612,0.307240764308458,0,0.500547425135725,1.75849285861836,82.1298212990965,1.23087398947712,1.08182271390393,5.32915148796512,0,0,2.78365540616599,0,20.6170260913335,0,0,0.296964680832639,0,0,0.703347082052564,0.111308705022906,143.873782199961,0,5.37969568277888,19.0635901716492,0,0,2.70786572014353,0,0,0,0,6.31317796076375,55.0811112397962,0,0,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.774054819518572,0.295547618953547,4.16832254592548,0.21787692703798,0,3.30886111566327,0,0,0.3590305776390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| ||
|short_description=p1@SH2D2A | |||
}} | }} |
Latest revision as of 18:25, 17 September 2015
Short description: | p1@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH2D2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495306_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.57e-35 | 168 |
hematopoietic cell | 1.82e-34 | 177 |
hematopoietic oligopotent progenitor cell | 2.74e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-31 | 161 |
leukocyte | 1.58e-30 | 136 |
nongranular leukocyte | 1.03e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 1.34e-22 | 120 |
T cell | 6.48e-21 | 25 |
pro-T cell | 6.48e-21 | 25 |
lymphocyte | 1.45e-18 | 53 |
common lymphoid progenitor | 1.45e-18 | 53 |
lymphoid lineage restricted progenitor cell | 4.08e-18 | 52 |
mature alpha-beta T cell | 1.12e-16 | 18 |
alpha-beta T cell | 1.12e-16 | 18 |
immature T cell | 1.12e-16 | 18 |
mature T cell | 1.12e-16 | 18 |
immature alpha-beta T cell | 1.12e-16 | 18 |
myeloid cell | 1.13e-13 | 108 |
common myeloid progenitor | 1.13e-13 | 108 |
CD8-positive, alpha-beta T cell | 6.93e-11 | 11 |
classical monocyte | 1.91e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-10 | 42 |
myeloid leukocyte | 3.22e-10 | 72 |
defensive cell | 7.04e-08 | 48 |
phagocyte | 7.04e-08 | 48 |
granulocyte monocyte progenitor cell | 7.59e-08 | 67 |
myeloid lineage restricted progenitor cell | 3.41e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.08e-16 | 98 |
blood island | 6.08e-16 | 98 |
hemolymphoid system | 4.83e-14 | 108 |
blood | 2.06e-13 | 15 |
haemolymphatic fluid | 2.06e-13 | 15 |
organism substance | 2.06e-13 | 15 |
adult organism | 3.54e-08 | 114 |
immune system | 4.69e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.85e-07 | 39 |