FFCP PHASE1:Hg19::chr1:44805000..44805011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79033 | |EntrezGene=79033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17276 | |HGNC=17276 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN03 | |UniProt=B4DN03 | ||
|association_with_transcript=-4bp_to_AK297708_5end | |association_with_transcript=-4bp_to_AK297708_5end | ||
|cluster_id=chr1:44805000..44805011,- | |||
|description=CAGE_peak_4_at_ERI3_5end | |description=CAGE_peak_4_at_ERI3_5end | ||
|id=chr1:44805000..44805011,- | |id=chr1:44805000..44805011,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.06e-10!82;UBERON:0005743!4.58e-10!86;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000955!2.54e-09!69;UBERON:0006238!2.54e-09!69;UBERON:0002346!4.37e-09!90;UBERON:0001893!8.21e-09!34;UBERON:0000924!8.23e-09!173;UBERON:0006601!8.23e-09!173;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0003075!1.13e-08!86;UBERON:0007284!1.13e-08!86;UBERON:0002780!1.24e-08!41;UBERON:0001890!1.24e-08!41;UBERON:0006240!1.24e-08!41;UBERON:0000033!1.25e-08!123;UBERON:0000073!1.27e-08!94;UBERON:0001016!1.27e-08!94;UBERON:0002791!2.03e-08!33;UBERON:0004121!2.06e-08!169;UBERON:0002020!3.26e-08!34;UBERON:0003528!3.26e-08!34;UBERON:0002616!3.54e-08!59;UBERON:0003080!6.01e-08!42;UBERON:0001869!8.88e-08!32;UBERON:0003056!3.36e-07!61;UBERON:0001950!5.51e-07!20;UBERON:0007023!5.83e-07!115 | |ontology_enrichment_uberon=UBERON:0001017!2.06e-10!82;UBERON:0005743!4.58e-10!86;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000955!2.54e-09!69;UBERON:0006238!2.54e-09!69;UBERON:0002346!4.37e-09!90;UBERON:0001893!8.21e-09!34;UBERON:0000924!8.23e-09!173;UBERON:0006601!8.23e-09!173;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0003075!1.13e-08!86;UBERON:0007284!1.13e-08!86;UBERON:0002780!1.24e-08!41;UBERON:0001890!1.24e-08!41;UBERON:0006240!1.24e-08!41;UBERON:0000033!1.25e-08!123;UBERON:0000073!1.27e-08!94;UBERON:0001016!1.27e-08!94;UBERON:0002791!2.03e-08!33;UBERON:0004121!2.06e-08!169;UBERON:0002020!3.26e-08!34;UBERON:0003528!3.26e-08!34;UBERON:0002616!3.54e-08!59;UBERON:0003080!6.01e-08!42;UBERON:0001869!8.88e-08!32;UBERON:0003056!3.36e-07!61;UBERON:0001950!5.51e-07!20;UBERON:0007023!5.83e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.65e-08;20!UBERON:0002619;3.44e-08;22!UBERON:0001893;1.07e-07;34!UBERON:0000956;1.40e-07;25!UBERON:0000203;1.40e-07;25!UBERON:0001869;3.25e-07;32!UBERON:0002791;3.30e-07;32!UBERON:0002780;3.86e-07;41!UBERON:0001890;3.86e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-12,81;UBERON:0000955,3.72e-12,68;UBERON:0006238,3.72e-12,68;UBERON:0000073,5.09e-12,53;UBERON:0002616,5.09e-12,53;UBERON:0001049,7.61e-12,56;UBERON:0005068,7.61e-12,56;UBERON:0006241,7.61e-12,56;UBERON:0007135,7.61e-12,56;UBERON:0001016,7.81e-11,89;UBERON:0001893,9.35e-11,34;UBERON:0002780,2.07e-10,41;UBERON:0001890,2.07e-10,41;UBERON:0003080,2.07e-10,41;UBERON:0006240,2.07e-10,41;UBERON:0002619,9.23e-10,22;UBERON:0001950,1.08e-09,20;UBERON:0002791,2.12e-09,32;UBERON:0003528,2.66e-09,34;UBERON:0002020,2.66e-09,34;UBERON:0001869,2.96e-09,32;UBERON:0002346,3.06e-09,86;UBERON:0003075,5.59e-09,82;UBERON:0007284,5.59e-09,82;UBERON:0000956,5.88e-09,25;UBERON:0000203,5.88e-09,25;UBERON:0010371,5.10e-08,104;UBERON:0004121,5.65e-08,171;UBERON:0000924,5.65e-08,171;UBERON:0006601,5.65e-08,171;UBERON:0003056,1.04e-07,61 | |||
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| ||
|short_description=p4@ERI3 | |short_description=p4@ERI3 | ||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p4@ERI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ERI3_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_AK297708_5end |
EntrezGene: | ERI3 |
HGNC: | 17276 |
UniProt: | B4DN03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.12e-12 | 81 |
brain | 3.72e-12 | 68 |
future brain | 3.72e-12 | 68 |
regional part of nervous system | 5.09e-12 | 53 |
regional part of brain | 5.09e-12 | 53 |
neural tube | 7.61e-12 | 56 |
neural rod | 7.61e-12 | 56 |
future spinal cord | 7.61e-12 | 56 |
neural keel | 7.61e-12 | 56 |
nervous system | 7.81e-11 | 89 |
telencephalon | 9.35e-11 | 34 |
regional part of forebrain | 2.07e-10 | 41 |
forebrain | 2.07e-10 | 41 |
anterior neural tube | 2.07e-10 | 41 |
future forebrain | 2.07e-10 | 41 |
regional part of cerebral cortex | 9.23e-10 | 22 |
neocortex | 1.08e-09 | 20 |
regional part of telencephalon | 2.12e-09 | 32 |
brain grey matter | 2.66e-09 | 34 |
gray matter | 2.66e-09 | 34 |
cerebral hemisphere | 2.96e-09 | 32 |
neurectoderm | 3.06e-09 | 86 |
neural plate | 5.59e-09 | 82 |
presumptive neural plate | 5.59e-09 | 82 |
cerebral cortex | 5.88e-09 | 25 |
pallium | 5.88e-09 | 25 |
ecto-epithelium | 5.10e-08 | 104 |
ectoderm-derived structure | 5.65e-08 | 171 |
ectoderm | 5.65e-08 | 171 |
presumptive ectoderm | 5.65e-08 | 171 |
pre-chordal neural plate | 1.04e-07 | 61 |