FFCP PHASE1:Hg19::chr1:16482527..16482546,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:16482527..16482546,-
|short_description=p2@EPHA2
|description=CAGE_peak_2_at_EPHA2_5end
|association_with_transcript=0bp_to_ENST00000461614_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1969 | |EntrezGene=1969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3386 | |HGNC=3386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461614_5end | |||
|cluster_id=chr1:16482527..16482546,- | |||
|coexpression_cluster_id=C3898 | |||
|description=CAGE_peak_2_at_EPHA2_5end | |||
|id=chr1:16482527..16482546,- | |||
|ontology_enrichment_celltype=CL:0000066!3.90e-57!254;CL:0000220!9.68e-33!246;CL:0002321!1.18e-32!248;CL:0000076!1.34e-18!62;CL:0000223!3.47e-15!59;CL:0002076!6.70e-15!43;CL:0000213!1.31e-12!57;CL:0000215!1.31e-12!57;CL:0000222!4.17e-12!119;CL:0002078!5.71e-12!44;CL:0000115!4.57e-11!35;CL:0002139!4.94e-11!24;CL:0002368!7.95e-09!13;CL:0000071!1.60e-08!18;CL:0002546!1.60e-08!18;CL:1000497!1.72e-08!18;CL:0002518!1.72e-08!18;CL:1000449!4.27e-08!16;CL:0000548!5.18e-07!679;CL:0000004!5.18e-07!679;CL:0000255!5.18e-07!679;CL:0002202!6.87e-07!9;CL:0002632!6.87e-07!9;CL:0002681!7.88e-07!13;CL:0002584!7.88e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.00e-12;42!CL:0002139;4.76e-12;24!CL:0000115;4.90e-11;36!CL:0000076;4.31e-10;63!CL:0002368;1.55e-09;13!CL:1000497;1.77e-09;17!CL:0002518;1.77e-09;17!CL:0000071;2.55e-09;18!CL:1000449;3.75e-09;15!CL:0000213;8.02e-09;58!CL:0000215;8.02e-09;58!CL:0002078;1.05e-08;45!CL:0002681;8.97e-08;12!CL:0002584;8.97e-08;12!CL:0002202;1.93e-07;9!CL:0002632;1.93e-07;9!CL:0000066;7.29e-07;253!CL:0002251;7.87e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.33e-60,253;CL:0002321,1.09e-32,250;CL:0000076,1.03e-19,63;CL:0002076,5.92e-17,42;CL:0000223,6.53e-17,58;CL:0000213,3.93e-14,58;CL:0000215,3.93e-14,58;CL:0002078,2.79e-13,45;CL:0000115,6.90e-13,36;CL:0000222,6.16e-12,121;CL:0002139,6.49e-12,24;CL:1000497,1.59e-09,17;CL:0002518,1.59e-09,17;CL:0002368,1.67e-09,13;CL:0000071,3.59e-09,18;CL:0002546,3.59e-09,18;CL:1000449,4.03e-09,15;CL:0002681,9.60e-08,12;CL:0002584,9.60e-08,12;CL:0002202,2.18e-07,9;CL:0002632,2.18e-07,9;CL:0002251,6.51e-07,20 | |||
|ontology_enrichment_development_v019=CL:0002546;2.55e-09;18!CL:0000223;4.74e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.88e-13!106;DOID:0050687!2.68e-09!143;DOID:1749!6.79e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-13,106;DOID:0050687,1.36e-08,143;DOID:1749,2.15e-07,14 | |||
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| ||
|short_description=p2@EPHA2 | |||
}} | }} |
Latest revision as of 09:37, 18 September 2015
Short description: | p2@EPHA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPHA2_5end |
Coexpression cluster: | C3898_Alveolar_immature_serous_Bronchial_Tracheal_Keratinocyte_embryonic |
Association with transcript: | 0bp_to_ENST00000461614_5end |
EntrezGene: | EPHA2 |
HGNC: | 3386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.33e-60 | 253 |
embryonic cell | 1.09e-32 | 250 |
squamous epithelial cell | 1.03e-19 | 63 |
endo-epithelial cell | 5.92e-17 | 42 |
endodermal cell | 6.53e-17 | 58 |
lining cell | 3.93e-14 | 58 |
barrier cell | 3.93e-14 | 58 |
meso-epithelial cell | 2.79e-13 | 45 |
endothelial cell | 6.90e-13 | 36 |
mesodermal cell | 6.16e-12 | 121 |
endothelial cell of vascular tree | 6.49e-12 | 24 |
kidney cell | 1.59e-09 | 17 |
kidney epithelial cell | 1.59e-09 | 17 |
respiratory epithelial cell | 1.67e-09 | 13 |
blood vessel endothelial cell | 3.59e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.59e-09 | 18 |
epithelial cell of nephron | 4.03e-09 | 15 |
kidney cortical cell | 9.60e-08 | 12 |
renal cortical epithelial cell | 9.60e-08 | 12 |
epithelial cell of tracheobronchial tree | 2.18e-07 | 9 |
epithelial cell of lower respiratory tract | 2.18e-07 | 9 |
epithelial cell of alimentary canal | 6.51e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-13 | 106 |
cell type cancer | 1.36e-08 | 143 |
squamous cell carcinoma | 2.15e-07 | 14 |