FFCP PHASE1:Hg19::chr1:19778700..19778738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:19778700..19778738,- | |||
|coexpression_cluster_id=C368 | |coexpression_cluster_id=C368 | ||
|description=CAGE_peak_at_chr1:19778700..19778738,- | |description=CAGE_peak_at_chr1:19778700..19778738,- | ||
|id=chr1:19778700..19778738,- | |id=chr1:19778700..19778738,- | ||
|ontology_enrichment_celltype=CL:0000055!5.80e-17!180;CL:0000057!4.43e-13!75;CL:0000680!9.13e-09!57;CL:0000056!9.13e-09!57;CL:0000355!9.13e-09!57;CL:0000183!9.59e-08!59;CL:0000187!1.73e-07!54;CL:0002570!4.49e-07!8 | |ontology_enrichment_celltype=CL:0000055!5.80e-17!180;CL:0000057!4.43e-13!75;CL:0000680!9.13e-09!57;CL:0000056!9.13e-09!57;CL:0000355!9.13e-09!57;CL:0000183!9.59e-08!59;CL:0000187!1.73e-07!54;CL:0002570!4.49e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002564;1.36e-08;3!CL:0000359;1.80e-08;32!CL:0000192;8.16e-08;43!CL:0002582;2.29e-07;3!CL:0002570;4.22e-07;8!CL:0002540;8.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.26e-09,43;CL:0000514,2.26e-09,43;CL:0000057,4.71e-09,76;CL:0000680,5.47e-09,58;CL:0000056,5.47e-09,58;CL:0000355,5.47e-09,58;CL:0000359,8.74e-09,32;CL:0000187,1.36e-08,55;CL:0002564,1.36e-08,3;CL:0002582,1.53e-07,3;CL:0000393,2.49e-07,61;CL:0000211,2.49e-07,61;CL:0000048,2.55e-07,427;CL:0002570,4.10e-07,8;CL:0000723,5.20e-07,433;CL:0002540,8.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.16e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.56e-12!83;UBERON:0002329!1.56e-12!83;UBERON:0003077!1.56e-12!83;UBERON:0003059!1.56e-12!83;UBERON:0007282!1.56e-12!83;UBERON:0009618!1.56e-12!83;UBERON:0007285!1.56e-12!83;UBERON:0004290!5.49e-10!70;UBERON:0007023!6.52e-09!115;UBERON:0000486!1.41e-08!82;UBERON:0002385!1.44e-08!63;UBERON:0001015!1.44e-08!63;UBERON:0000383!1.44e-08!63;UBERON:0001013!3.66e-08!14;UBERON:0001134!4.53e-08!61;UBERON:0002036!4.53e-08!61;UBERON:0003082!4.53e-08!61;UBERON:0000475!9.09e-08!365;UBERON:0000479!4.61e-07!787;UBERON:0000481!4.72e-07!347;UBERON:0002200!6.49e-07!11;UBERON:0006876!6.49e-07!11;UBERON:0000477!8.62e-07!286 | |ontology_enrichment_uberon=UBERON:0000914!1.56e-12!83;UBERON:0002329!1.56e-12!83;UBERON:0003077!1.56e-12!83;UBERON:0003059!1.56e-12!83;UBERON:0007282!1.56e-12!83;UBERON:0009618!1.56e-12!83;UBERON:0007285!1.56e-12!83;UBERON:0004290!5.49e-10!70;UBERON:0007023!6.52e-09!115;UBERON:0000486!1.41e-08!82;UBERON:0002385!1.44e-08!63;UBERON:0001015!1.44e-08!63;UBERON:0000383!1.44e-08!63;UBERON:0001013!3.66e-08!14;UBERON:0001134!4.53e-08!61;UBERON:0002036!4.53e-08!61;UBERON:0003082!4.53e-08!61;UBERON:0000475!9.09e-08!365;UBERON:0000479!4.61e-07!787;UBERON:0000481!4.72e-07!347;UBERON:0002200!6.49e-07!11;UBERON:0006876!6.49e-07!11;UBERON:0000477!8.62e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.80e-14;8!UBERON:0000982;2.80e-14;8!UBERON:0004770;2.80e-14;8!UBERON:0011135;3.26e-13;5!UBERON:0002216;3.26e-13;5!UBERON:0011134;3.26e-13;5!UBERON:0002209;3.26e-13;5!UBERON:0002213;3.26e-13;5!UBERON:0007844;3.26e-13;5!UBERON:0011138;3.26e-13;5!UBERON:0001130;3.26e-13;5!UBERON:0001066;3.26e-13;5!UBERON:0001468;3.26e-13;5!UBERON:0001434;3.21e-11;36!UBERON:0000075;1.52e-10;16!UBERON:0001013;3.22e-09;14!UBERON:0004765;3.87e-09;26!UBERON:0002242;1.36e-08;3!UBERON:0002204;1.92e-08;70!UBERON:0005284;2.28e-08;5!UBERON:0006876;2.33e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,4.05e-14,8;UBERON:0000982,4.05e-14,8;UBERON:0004770,4.05e-14,8;UBERON:0011135,3.29e-13,5;UBERON:0002216,3.29e-13,5;UBERON:0011134,3.29e-13,5;UBERON:0002209,3.29e-13,5;UBERON:0002213,3.29e-13,5;UBERON:0005856,3.29e-13,5;UBERON:0005866,3.29e-13,5;UBERON:0005863,3.29e-13,5;UBERON:0007844,3.29e-13,5;UBERON:0011138,3.29e-13,5;UBERON:0001130,3.29e-13,5;UBERON:0001066,3.29e-13,5;UBERON:0001468,3.29e-13,5;UBERON:0002329,1.15e-11,71;UBERON:0003059,1.15e-11,71;UBERON:0007282,1.15e-11,71;UBERON:0004290,1.15e-11,71;UBERON:0009618,1.15e-11,71;UBERON:0003077,2.04e-11,72;UBERON:0007285,2.04e-11,72;UBERON:0007524,3.56e-11,73;UBERON:0000486,5.45e-11,83;UBERON:0000075,1.28e-10,16;UBERON:0007503,4.55e-10,78;UBERON:0001013,2.52e-09,14;UBERON:0002204,2.77e-09,167;UBERON:0002242,1.36e-08,3;UBERON:0003068,1.36e-08,3;UBERON:0002328,1.36e-08,3;UBERON:0004880,1.36e-08,3;UBERON:0005284,2.13e-08,5;UBERON:0001134,4.09e-08,62;UBERON:0002036,4.09e-08,62;UBERON:0003082,4.09e-08,62;UBERON:0002385,1.01e-07,64;UBERON:0001015,1.01e-07,64;UBERON:0000383,1.01e-07,64;UBERON:0011137,2.53e-07,14;UBERON:0006876,2.72e-07,11 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0,0,0,0.872338524100369,0,19.5833160762318,1.56711376919903,0,0,0,0,17.8223548262467,15.90707403494,0,0,0,0,1.23121058076788,2.04000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,2.50668955317945,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,2.17847724779836,0.134710672069688,0.163461903113459,48.1316619910882,29.3849721484799,0.937285727335186,4.99456122928513,2.2818872861778,6.57574194427925,0,0.161872944368132,0,12.8617127890583,0.982674538494144,7.95608515053394,0,0.494533858557114,3.64064544775211,5.03032699271367,1.68336113954066,0.875829639103749,4.98715407871529,0.438977620880838,1.22595118319608,1.50238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.721367704669072,0,0,0.168776332241266,0,0.504867548488229,0.184099797284599,1.93975268182574,0.355009592516614,0.201504196455281,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,1.12131084345361,5.66748089483264,0.7333828582095,0,10.7296933755565,0.845302752556,0,0,4.11531798819427,0,0.266422179016099,0.142977993658148,0,0,1.95441710576241,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.723906533337896,1.84928690295345,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,19.3852556916241,29.0098902214613,6.78162559249339,0,0,0.157702415033935,0.468565659970853,2.70851489754947,0,4.1389228517002,0.664225598535437,1.29058417979192,1.30325421702124,98.2921810462958,77.5504137812534,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,1.48418066444991,0.771048469013278,2.66342587969691,3.77784917663522,1.55776328755086,2.78904908303902,0,0,0.0920809889358963,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,2.15668063960502,0.614014698904518,0.275673144969061,2.0409846524972,0.870100163485371,0.426133137080504,0,0,0,0,0,2.78907329578371,0.62962469366128,1.3940745403212,0,2.12922412126809,2.60979897622522,1.48259375283136,0.143124886741991,4.83805880167568,2.53103539774981,0.38126038784765,0.255897791311334,3.85145089230528,7.95508119814842,0,0.539617372749944,0.823611089208164,0,1.01091240786658,1.58510321173008,0,0,0.487426979262569,0,1.36499911407986,0,2.26016233240486,2.75682671773062,1.32687795048244,0,5.20897980840019,0,0,0,0,0,0,0,0.354761064070598,1.05553817648832,1.31717957183961,1.13841952129715,3.14941248220485,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0.222617410045812,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.493217028184668,0,2.22273980289274,1.93866549219044,0.463840490809256,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.995213339381022,0,6.14279112031123,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,1.89559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0,0,0,0.379864775735272,0.195551382734803,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,1.14580212005842,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0.182248669974074,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0.146552233678082,0,0,0.13223260174269,0,0,0.747511887973863,0.157204305099666,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,1.22021956690538,0.310482014706917,0,0,0,0,0,0,0,8.0597593558912,0.233713309847224,3.88364103051829,2.46223906857616,4.77979013329893,38.261882528651,0.457680136793847,4.38569678913393,0.621748802331122,2.66139269981341,0.159296767163702,0,0.310525913752519,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0.909243296012797,0,0.464033759878494,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.6124909547064,0.321146125482298,1.41696576325585,0.319267718114302,0.41023272848151,0,0.276629009856872,0,1.4276942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| ||
|short_description=p@chr1:19778700..19778738,- | |short_description=p@chr1:19778700..19778738,- | ||
}} | }} |
Latest revision as of 01:51, 28 July 2015
Short description: | p@chr1:19778700..19778738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19778700..19778738, - |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.26e-09 | 43 |
smooth muscle myoblast | 2.26e-09 | 43 |
fibroblast | 4.71e-09 | 76 |
muscle precursor cell | 5.47e-09 | 58 |
myoblast | 5.47e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.47e-09 | 58 |
vascular associated smooth muscle cell | 8.74e-09 | 32 |
muscle cell | 1.36e-08 | 55 |
nucleus pulposus cell of intervertebral disc | 1.36e-08 | 3 |
visceral preadipocyte | 1.53e-07 | 3 |
electrically responsive cell | 2.49e-07 | 61 |
electrically active cell | 2.49e-07 | 61 |
multi fate stem cell | 2.55e-07 | 427 |
mesenchymal stem cell of adipose | 4.10e-07 | 8 |
somatic stem cell | 5.20e-07 | 433 |
mesenchymal stem cell of the bone marrow | 8.69e-07 | 6 |