FFCP PHASE1:Hg19::chr7:31855776..31855807,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:31855776..31855807,- | |||
|coexpression_cluster_id=C254 | |coexpression_cluster_id=C254 | ||
|description=CAGE_peak_at_chr7:31855776..31855807,- | |description=CAGE_peak_at_chr7:31855776..31855807,- | ||
|id=chr7:31855776..31855807,- | |id=chr7:31855776..31855807,- | ||
|ontology_enrichment_celltype=CL:0002139!5.32e-33!24;CL:0000115!6.65e-25!35;CL:0000071!1.82e-22!18;CL:0002546!1.82e-22!18;CL:0002078!8.53e-22!44;CL:0000213!1.34e-20!57;CL:0000215!1.34e-20!57;CL:0002618!4.67e-14!3;CL:0005020!2.28e-12!6;CL:0002138!2.28e-12!6;CL:0005022!2.28e-12!6;CL:0000076!2.73e-12!62;CL:0002543!5.53e-12!6;CL:0000222!4.02e-11!119;CL:1000413!6.51e-08!9;CL:0002144!7.75e-07!3 | |ontology_enrichment_celltype=CL:0002139!5.32e-33!24;CL:0000115!6.65e-25!35;CL:0000071!1.82e-22!18;CL:0002546!1.82e-22!18;CL:0002078!8.53e-22!44;CL:0000213!1.34e-20!57;CL:0000215!1.34e-20!57;CL:0002618!4.67e-14!3;CL:0005020!2.28e-12!6;CL:0002138!2.28e-12!6;CL:0005022!2.28e-12!6;CL:0000076!2.73e-12!62;CL:0002543!5.53e-12!6;CL:0000222!4.02e-11!119;CL:1000413!6.51e-08!9;CL:0002144!7.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.23e-30;24!CL:0002138;9.86e-24;6!CL:0002618;4.45e-21;3!CL:0000115;1.46e-14;36!CL:0000071;8.50e-14;18!CL:0000213;2.65e-11;58!CL:0000215;2.65e-11;58!CL:0002543;4.84e-11;6!CL:0002078;8.72e-11;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.18e-30,24;CL:0005020,7.83e-24,6;CL:0002138,7.83e-24,6;CL:0005022,7.83e-24,6;CL:0002618,4.94e-21,3;CL:0000115,2.46e-20,36;CL:0000213,3.03e-16,58;CL:0000215,3.03e-16,58;CL:0002078,3.40e-16,45;CL:0000071,9.09e-14,18;CL:0002546,9.09e-14,18;CL:0002543,5.09e-11,6;CL:0000222,1.99e-09,121;CL:0000076,1.97e-08,63 | |||
|ontology_enrichment_development_v019=CL:0005022;9.86e-24;6!UBERON:0005425;1.93e-16;1!CL:0002546;8.50e-14;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr7:31855776..31855807,- | |short_description=p@chr7:31855776..31855807,- | ||
}} | }} |
Latest revision as of 09:28, 31 July 2015
Short description: | p@chr7:31855776..31855807, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:31855776..31855807, - |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.18e-30 | 24 |
lymphangioblast | 7.83e-24 | 6 |
endothelial cell of lymphatic vessel | 7.83e-24 | 6 |
vascular lymphangioblast | 7.83e-24 | 6 |
endothelial cell of umbilical vein | 4.94e-21 | 3 |
endothelial cell | 2.46e-20 | 36 |
lining cell | 3.03e-16 | 58 |
barrier cell | 3.03e-16 | 58 |
meso-epithelial cell | 3.40e-16 | 45 |
blood vessel endothelial cell | 9.09e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.09e-14 | 18 |
vein endothelial cell | 5.09e-11 | 6 |
mesodermal cell | 1.99e-09 | 121 |
squamous epithelial cell | 1.97e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.69e-18 | 8 |
lymph vasculature | 4.69e-18 | 8 |
lymphatic part of lymphoid system | 4.69e-18 | 8 |
cranial nerve II | 1.93e-16 | 1 |
cranial nerve | 1.93e-16 | 1 |
nerve trunk | 1.93e-16 | 1 |
nerve connecting eye with brain | 1.93e-16 | 1 |
nerve | 1.93e-16 | 1 |
retinal neural layer | 1.93e-16 | 1 |
presumptive neural retina | 1.93e-16 | 1 |
lymphoid system | 1.41e-14 | 10 |
blood vessel endothelium | 9.09e-14 | 18 |
endothelium | 9.09e-14 | 18 |
cardiovascular system endothelium | 9.09e-14 | 18 |
vessel | 9.77e-14 | 68 |
umbilical vein | 4.96e-13 | 5 |
vasculature | 6.79e-12 | 78 |
vascular system | 6.79e-12 | 78 |
simple squamous epithelium | 2.53e-11 | 22 |
squamous epithelium | 5.34e-10 | 25 |
neural tissue | 6.94e-09 | 2 |
multi cell component structure | 6.94e-09 | 2 |
neuron projection bundle | 6.94e-09 | 2 |
cardiovascular system | 2.56e-08 | 109 |
circulatory system | 4.47e-08 | 112 |
vein | 1.20e-07 | 9 |
umbilical blood vessel | 1.20e-07 | 9 |
venous blood vessel | 1.20e-07 | 9 |
venous system | 1.20e-07 | 9 |