FFCP PHASE1:Hg19::chr10:106113272..106113284,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000435434_5end | |association_with_transcript=48bp_to_ENST00000435434_5end | ||
|cluster_id=chr10:106113272..106113284,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_4_at_ENST00000435434_5end | |description=CAGE_peak_4_at_ENST00000435434_5end | ||
|id=chr10:106113272..106113284,- | |id=chr10:106113272..106113284,- | ||
|ontology_enrichment_celltype=CL:0000766!2.09e-37!76;CL:0000557!5.23e-30!71;CL:0000763!1.27e-28!112;CL:0000049!1.27e-28!112;CL:0000839!1.99e-28!70;CL:0002009!9.21e-26!65;CL:0000738!1.08e-24!140;CL:0002057!1.38e-24!42;CL:0002194!5.35e-23!63;CL:0000576!5.35e-23!63;CL:0000040!5.35e-23!63;CL:0000559!5.35e-23!63;CL:0000860!1.93e-22!45;CL:0000037!1.78e-19!172;CL:0000566!1.78e-19!172;CL:0002032!6.65e-19!165;CL:0000837!6.65e-19!165;CL:0002031!1.15e-17!124;CL:0000988!1.29e-17!182;CL:0000094!3.30e-13!8;CL:0002087!3.77e-13!119;CL:0000134!6.48e-12!358;CL:0002320!2.41e-11!365;CL:0000219!4.79e-11!390;CL:0000081!3.10e-09!11;CL:0000775!9.88e-08!3;CL:0000723!1.18e-07!436;CL:0000048!1.74e-07!430;CL:0000034!3.27e-07!444;CL:0002274!4.81e-07!5;CL:0000457!4.81e-07!5;CL:0002191!4.81e-07!5;CL:0000097!4.81e-07!5;CL:0000831!4.81e-07!5;CL:0002028!4.81e-07!5 | |ontology_enrichment_celltype=CL:0000766!2.09e-37!76;CL:0000557!5.23e-30!71;CL:0000763!1.27e-28!112;CL:0000049!1.27e-28!112;CL:0000839!1.99e-28!70;CL:0002009!9.21e-26!65;CL:0000738!1.08e-24!140;CL:0002057!1.38e-24!42;CL:0002194!5.35e-23!63;CL:0000576!5.35e-23!63;CL:0000040!5.35e-23!63;CL:0000559!5.35e-23!63;CL:0000860!1.93e-22!45;CL:0000037!1.78e-19!172;CL:0000566!1.78e-19!172;CL:0002032!6.65e-19!165;CL:0000837!6.65e-19!165;CL:0002031!1.15e-17!124;CL:0000988!1.29e-17!182;CL:0000094!3.30e-13!8;CL:0002087!3.77e-13!119;CL:0000134!6.48e-12!358;CL:0002320!2.41e-11!365;CL:0000219!4.79e-11!390;CL:0000081!3.10e-09!11;CL:0000775!9.88e-08!3;CL:0000723!1.18e-07!436;CL:0000048!1.74e-07!430;CL:0000034!3.27e-07!444;CL:0002274!4.81e-07!5;CL:0000457!4.81e-07!5;CL:0002191!4.81e-07!5;CL:0000097!4.81e-07!5;CL:0000831!4.81e-07!5;CL:0002028!4.81e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.90e-51;33!CL:0002057;5.90e-51;33!CL:0000473;5.65e-50;39!CL:0000234;5.65e-50;39!CL:0000766;1.62e-25;69!CL:0000094;7.82e-22;8!CL:0000775;3.96e-21;3!CL:0000576;6.17e-21;48!CL:0000081;7.65e-16;11!CL:0000771;1.15e-15;2!CL:0000763;5.59e-15;100!CL:0001014;1.19e-14;2!CL:0001016;1.19e-14;2!CL:0000235;6.14e-11;6!CL:0000738;1.84e-10;136!CL:0002087;4.27e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.72e-60,72;CL:0000473,1.33e-53,48;CL:0000234,1.33e-53,48;CL:0002009,1.30e-49,61;CL:0000557,1.80e-49,67;CL:0000763,2.69e-45,108;CL:0000049,2.69e-45,108;CL:0000860,3.66e-44,42;CL:0002057,3.66e-44,42;CL:0002194,3.92e-42,59;CL:0000576,3.92e-42,59;CL:0000040,3.92e-42,59;CL:0000559,3.92e-42,59;CL:0000839,1.50e-41,66;CL:0000738,4.04e-35,136;CL:0002032,5.36e-29,161;CL:0000837,5.36e-29,161;CL:0000037,1.32e-27,168;CL:0000988,5.61e-26,177;CL:0002031,5.73e-26,120;CL:0000094,6.44e-22,8;CL:0000775,2.90e-21,3;CL:0002087,5.99e-20,115;CL:0000081,6.65e-16,11;CL:0000771,1.15e-15,2;CL:0001014,1.47e-14,2;CL:0001016,1.47e-14,2;CL:0000235,6.47e-11,6;CL:0000134,1.19e-10,354;CL:0002320,2.37e-10,361;CL:0000219,2.73e-09,386;CL:0000723,1.06e-08,433;CL:0000034,1.88e-08,441;CL:0000048,5.47e-08,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-30;42!CL:0000049;2.22e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.83e-29!80;UBERON:0002390!1.21e-28!102;UBERON:0003061!1.21e-28!102;UBERON:0001474!4.97e-26!86;UBERON:0002193!6.19e-25!112;UBERON:0004765!8.64e-22!101;UBERON:0001434!8.64e-22!101;UBERON:0002405!5.84e-20!115;UBERON:0002384!3.92e-11!375;UBERON:0003081!6.16e-11!216;UBERON:0002204!1.29e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!7.83e-29!80;UBERON:0002390!1.21e-28!102;UBERON:0003061!1.21e-28!102;UBERON:0001474!4.97e-26!86;UBERON:0002193!6.19e-25!112;UBERON:0004765!8.64e-22!101;UBERON:0001434!8.64e-22!101;UBERON:0002405!5.84e-20!115;UBERON:0002384!3.92e-11!375;UBERON:0003081!6.16e-11!216;UBERON:0002204!1.29e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.31e-43,76;UBERON:0001474,8.78e-40,82;UBERON:0004765,6.42e-36,90;UBERON:0002405,1.22e-34,93;UBERON:0002390,1.12e-32,98;UBERON:0003061,1.12e-32,98;UBERON:0001434,6.02e-32,100;UBERON:0002193,2.71e-29,108;UBERON:0002204,1.66e-17,167;UBERON:0003081,1.19e-13,203;UBERON:0002384,6.11e-10,371;UBERON:0000926,2.93e-07,315;UBERON:0004120,2.93e-07,315;UBERON:0006603,2.93e-07,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.485168122375632,1.16214518452842,0,1.23882548358041,0.575384784644301,0.512321413058201,1.41889337933151,4.13694816883942,3.87290810150296,5.41705946377367,0,0,1.12361742222542,2.14258724659632,4.17207735198922,3.83602275479425,0,0,0,4.64334781805734,1.70215567407342,6.22822248995575,1.00499466102697,0,0.65156653411535,2.42159801053347,8.10210799172642,7.91155968602211,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14809383306323,0.743155811443641,0,0.16798212819886,0,0,0,0,95.0840049139171,0,0.414656231081544,0.144119953416961,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.0952078182318,0.121499113316049,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.757612021100357,0,0,0.457680136793847,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.485168122375632,1.16214518452842,0,1.23882548358041,0.575384784644301,0.512321413058201,1.41889337933151,4.13694816883942,3.87290810150296,5.41705946377367,0,0,1.12361742222542,2.14258724659632,4.17207735198922,3.83602275479425,0,0,0,4.64334781805734,1.70215567407342,6.22822248995575,1.00499466102697,0,0.65156653411535,2.42159801053347,8.10210799172642,7.91155968602211,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14809383306323,0.743155811443641,0,0.16798212819886,0,0,0,0,95.0840049139171,0,0.414656231081544,0.144119953416961,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.0952078182318,0.121499113316049,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.757612021100357,0,0,0.457680136793847,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ENST00000435434 | |short_description=p4@ENST00000435434 | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p4@ENST00000435434 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000435434_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 48bp_to_ENST00000435434_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.31e-43 | 76 |
bone element | 8.78e-40 | 82 |
skeletal element | 6.42e-36 | 90 |
immune system | 1.22e-34 | 93 |
hematopoietic system | 1.12e-32 | 98 |
blood island | 1.12e-32 | 98 |
skeletal system | 6.02e-32 | 100 |
hemolymphoid system | 2.71e-29 | 108 |
musculoskeletal system | 1.66e-17 | 167 |
lateral plate mesoderm | 1.19e-13 | 203 |
connective tissue | 6.11e-10 | 371 |
mesoderm | 2.93e-07 | 315 |
mesoderm-derived structure | 2.93e-07 | 315 |
presumptive mesoderm | 2.93e-07 | 315 |