FFCP PHASE1:Hg19::chr19:44169575..44169593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:44169575..44169593,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr19:44169575..44169593,- | |description=CAGE_peak_at_chr19:44169575..44169593,- | ||
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|ontology_enrichment_celltype=CL:0000766!6.91e-40!76;CL:0002009!4.08e-37!65;CL:0002194!1.14e-35!63;CL:0000576!1.14e-35!63;CL:0000040!1.14e-35!63;CL:0000559!1.14e-35!63;CL:0000557!4.06e-34!71;CL:0002057!1.23e-33!42;CL:0000860!1.91e-33!45;CL:0000839!7.52e-32!70;CL:0000763!2.43e-24!112;CL:0000049!2.43e-24!112;CL:0000723!3.77e-19!436;CL:0000048!6.15e-19!430;CL:0000034!1.18e-18!444;CL:0000738!1.00e-15!140;CL:0002320!5.52e-15!365;CL:0000012!1.84e-14!682;CL:0000548!2.53e-14!679;CL:0000004!2.53e-14!679;CL:0000255!2.53e-14!679;CL:0000134!3.36e-14!358;CL:0002371!8.21e-14!591;CL:0000144!1.94e-13!625;CL:0002087!5.04e-13!119;CL:0002031!5.30e-12!124;CL:0000219!9.19e-12!390;CL:0000037!1.36e-10!172;CL:0000566!1.36e-10!172;CL:0002032!2.46e-10!165;CL:0000837!2.46e-10!165;CL:0000988!3.07e-10!182;CL:0000003!5.07e-10!722;CL:0000063!2.53e-08!578;CL:0000094!1.28e-07!8 | |ontology_enrichment_celltype=CL:0000766!6.91e-40!76;CL:0002009!4.08e-37!65;CL:0002194!1.14e-35!63;CL:0000576!1.14e-35!63;CL:0000040!1.14e-35!63;CL:0000559!1.14e-35!63;CL:0000557!4.06e-34!71;CL:0002057!1.23e-33!42;CL:0000860!1.91e-33!45;CL:0000839!7.52e-32!70;CL:0000763!2.43e-24!112;CL:0000049!2.43e-24!112;CL:0000723!3.77e-19!436;CL:0000048!6.15e-19!430;CL:0000034!1.18e-18!444;CL:0000738!1.00e-15!140;CL:0002320!5.52e-15!365;CL:0000012!1.84e-14!682;CL:0000548!2.53e-14!679;CL:0000004!2.53e-14!679;CL:0000255!2.53e-14!679;CL:0000134!3.36e-14!358;CL:0002371!8.21e-14!591;CL:0000144!1.94e-13!625;CL:0002087!5.04e-13!119;CL:0002031!5.30e-12!124;CL:0000219!9.19e-12!390;CL:0000037!1.36e-10!172;CL:0000566!1.36e-10!172;CL:0002032!2.46e-10!165;CL:0000837!2.46e-10!165;CL:0000988!3.07e-10!182;CL:0000003!5.07e-10!722;CL:0000063!2.53e-08!578;CL:0000094!1.28e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.45e-70;33!CL:0002057;3.45e-70;33!CL:0000473;2.52e-65;39!CL:0000234;2.52e-65;39!CL:0000576;2.93e-42;48!CL:0000766;1.00e-35;69!CL:0000763;2.57e-16;100!CL:0000094;7.05e-13;8!CL:0000235;2.58e-11;6!CL:0002393;3.13e-11;6!CL:0002397;3.13e-11;6!CL:0002087;2.04e-10;104!CL:0000738;8.06e-10;136!CL:0000081;3.71e-09;11!CL:0000771;3.09e-07;2 | |ontology_enrichment_celltype_v019=CL:0000860;3.45e-70;33!CL:0002057;3.45e-70;33!CL:0000473;2.52e-65;39!CL:0000234;2.52e-65;39!CL:0000576;2.93e-42;48!CL:0000766;1.00e-35;69!CL:0000763;2.57e-16;100!CL:0000094;7.05e-13;8!CL:0000235;2.58e-11;6!CL:0002393;3.13e-11;6!CL:0002397;3.13e-11;6!CL:0002087;2.04e-10;104!CL:0000738;8.06e-10;136!CL:0000081;3.71e-09;11!CL:0000771;3.09e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.15e-88,48;CL:0000234,1.15e-88,48;CL:0000860,1.40e-78,42;CL:0002057,1.40e-78,42;CL:0000766,1.06e-74,72;CL:0002009,9.06e-70,61;CL:0002194,1.06e-68,59;CL:0000576,1.06e-68,59;CL:0000040,1.06e-68,59;CL:0000559,1.06e-68,59;CL:0000557,1.30e-62,67;CL:0000839,2.32e-60,66;CL:0000763,1.58e-50,108;CL:0000049,1.58e-50,108;CL:0000738,1.36e-39,136;CL:0002087,7.34e-34,115;CL:0000037,3.90e-31,168;CL:0002031,2.75e-30,120;CL:0002032,6.76e-30,161;CL:0000837,6.76e-30,161;CL:0000988,6.49e-29,177;CL:0000048,3.73e-14,427;CL:0000723,9.39e-14,433;CL:0000034,3.09e-13,441;CL:0000134,3.54e-13,354;CL:0000094,4.45e-13,8;CL:0002320,1.16e-12,361;CL:0000235,4.82e-11,6;CL:0000219,7.50e-11,386;CL:0000081,2.68e-09,11;CL:0002393,1.64e-07,9;CL:0002397,1.64e-07,9;CL:0000771,2.91e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-56;42!CL:0000049;5.89e-15;108 | |ontology_enrichment_development_v019=CL:0002057;2.20e-56;42!CL:0000049;5.89e-15;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.29e-09;3!DOID:127;8.29e-09;3 | |ontology_enrichment_disease_v019=DOID:0060084;8.29e-09;3!DOID:127;8.29e-09;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.26e-09,3;DOID:127,4.26e-09,3;DOID:0060072,6.46e-07,4 | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.66e-54,76;UBERON:0001474,2.94e-49,82;UBERON:0002390,2.43e-46,98;UBERON:0003061,2.43e-46,98;UBERON:0004765,6.12e-44,90;UBERON:0002405,3.52e-42,93;UBERON:0002193,5.25e-41,108;UBERON:0001434,1.76e-38,100;UBERON:0002204,6.17e-28,167;UBERON:0003081,9.90e-26,203;UBERON:0000926,4.51e-18,315;UBERON:0004120,4.51e-18,315;UBERON:0006603,4.51e-18,315;UBERON:0002384,5.85e-12,371 | |||
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| ||
|short_description=p@chr19:44169575..44169593,- | |short_description=p@chr19:44169575..44169593,- | ||
}} | }} |
Latest revision as of 14:31, 27 July 2015
Short description: | p@chr19:44169575..44169593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:44169575..44169593, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.66e-54 | 76 |
bone element | 2.94e-49 | 82 |
hematopoietic system | 2.43e-46 | 98 |
blood island | 2.43e-46 | 98 |
skeletal element | 6.12e-44 | 90 |
immune system | 3.52e-42 | 93 |
hemolymphoid system | 5.25e-41 | 108 |
skeletal system | 1.76e-38 | 100 |
musculoskeletal system | 6.17e-28 | 167 |
lateral plate mesoderm | 9.90e-26 | 203 |
mesoderm | 4.51e-18 | 315 |
mesoderm-derived structure | 4.51e-18 | 315 |
presumptive mesoderm | 4.51e-18 | 315 |
connective tissue | 5.85e-12 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.26e-09 | 3 |
leiomyoma | 4.26e-09 | 3 |
benign neoplasm | 6.46e-07 | 4 |