FFCP PHASE1:Hg19::chr6:42145989..42146035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:42145989..42146035,+ | |||
|description=CAGE_peak_at_chr6:42145989..42146035,+ | |description=CAGE_peak_at_chr6:42145989..42146035,+ | ||
|id=chr6:42145989..42146035,+ | |id=chr6:42145989..42146035,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.29e-08!12;CL:1000494!3.29e-08!12;CL:0000133!3.75e-08!59;CL:1000449!1.08e-07!16;CL:0000221!1.44e-07!71;CL:0000055!1.45e-07!180;CL:0002322!2.55e-07!5;CL:0000540!3.78e-07!6;CL:0000031!3.78e-07!6;CL:0000404!3.78e-07!6 | |ontology_enrichment_celltype=CL:1000507!3.29e-08!12;CL:1000494!3.29e-08!12;CL:0000133!3.75e-08!59;CL:1000449!1.08e-07!16;CL:0000221!1.44e-07!71;CL:0000055!1.45e-07!180;CL:0002322!2.55e-07!5;CL:0000540!3.78e-07!6;CL:0000031!3.78e-07!6;CL:0000404!3.78e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.69e-14;5!CL:1000507;6.48e-14;10!CL:1000494;6.48e-14;10!CL:0002577;4.34e-09;3!CL:1000449;8.26e-09;15!CL:0000064;2.64e-08;3!CL:0000067;2.64e-08;3!CL:0005012;2.64e-08;3!CL:0002304;2.64e-08;3!CL:0000128;4.81e-08;7!CL:0000126;4.81e-08;7!CL:0000127;4.81e-08;7!CL:1000497;1.30e-07;17!CL:0002518;1.30e-07;17!CL:0000540;2.43e-07;6!CL:0000404;2.43e-07;6!CL:0002605;3.11e-07;3!CL:0002319;5.01e-07;25 | |ontology_enrichment_celltype_v019=CL:0002322;2.69e-14;5!CL:1000507;6.48e-14;10!CL:1000494;6.48e-14;10!CL:0002577;4.34e-09;3!CL:1000449;8.26e-09;15!CL:0000064;2.64e-08;3!CL:0000067;2.64e-08;3!CL:0005012;2.64e-08;3!CL:0002304;2.64e-08;3!CL:0000128;4.81e-08;7!CL:0000126;4.81e-08;7!CL:0000127;4.81e-08;7!CL:1000497;1.30e-07;17!CL:0002518;1.30e-07;17!CL:0000540;2.43e-07;6!CL:0000404;2.43e-07;6!CL:0002605;3.11e-07;3!CL:0002319;5.01e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.70e-14,5;CL:1000507,3.95e-14,10;CL:1000494,3.95e-14,10;CL:0000133,1.40e-09,59;CL:0002577,4.47e-09,3;CL:1000449,6.04e-09,15;CL:0000064,3.11e-08,3;CL:0000067,3.11e-08,3;CL:0005012,3.11e-08,3;CL:0002304,3.11e-08,3;CL:0000128,4.82e-08,7;CL:0000126,4.82e-08,7;CL:0000127,4.82e-08,7;CL:0002453,4.82e-08,7;CL:0000047,8.40e-08,8;CL:1000497,9.91e-08,17;CL:0002518,9.91e-08,17;CL:0000540,2.52e-07,6;CL:0000031,2.52e-07,6;CL:0000404,2.52e-07,6;CL:0002605,2.94e-07,3;CL:0000221,4.13e-07,72;CL:0002319,5.56e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.43e-07;6 | |ontology_enrichment_development_v019=CL:0000031;2.43e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!4.76e-20!86;UBERON:0007284!4.76e-20!86;UBERON:0003056!7.05e-20!61;UBERON:0005743!1.69e-19!86;UBERON:0002346!2.66e-19!90;UBERON:0000073!1.09e-18!94;UBERON:0001016!1.09e-18!94;UBERON:0001017!4.58e-18!82;UBERON:0000033!8.15e-16!123;UBERON:0000153!1.94e-15!129;UBERON:0007811!1.94e-15!129;UBERON:0004121!7.71e-15!169;UBERON:0002616!1.22e-14!59;UBERON:0000924!1.36e-14!173;UBERON:0006601!1.36e-14!173;UBERON:0001049!8.58e-14!57;UBERON:0005068!8.58e-14!57;UBERON:0006241!8.58e-14!57;UBERON:0007135!8.58e-14!57;UBERON:0000955!4.18e-13!69;UBERON:0006238!4.18e-13!69;UBERON:0001869!1.68e-12!32;UBERON:0002020!1.74e-12!34;UBERON:0003528!1.74e-12!34;UBERON:0001893!2.88e-12!34;UBERON:0002780!5.12e-12!41;UBERON:0001890!5.12e-12!41;UBERON:0006240!5.12e-12!41;UBERON:0002791!9.96e-12!33;UBERON:0003080!1.58e-11!42;UBERON:0000970!6.38e-11!20;UBERON:0002104!3.80e-10!21;UBERON:0000019!5.54e-10!19;UBERON:0000047!5.54e-10!19;UBERON:0004088!5.54e-10!19;UBERON:0003072!5.54e-10!19;UBERON:0003071!5.54e-10!19;UBERON:0004128!5.54e-10!19;UBERON:0000064!9.94e-10!219;UBERON:0001801!1.64e-09!14;UBERON:0000475!2.90e-09!365;UBERON:0000956!6.03e-09!25;UBERON:0000203!6.03e-09!25;UBERON:0000020!8.21e-09!23;UBERON:0000481!1.39e-08!347;UBERON:0001456!1.42e-08!21;UBERON:0001032!3.11e-08!24;UBERON:0004456!3.11e-08!24;UBERON:0000922!3.13e-08!612;UBERON:0009773!3.29e-08!12;UBERON:0001231!3.29e-08!12;UBERON:0004810!3.29e-08!12;UBERON:0000468!3.34e-08!659;UBERON:0001950!5.79e-08!20;UBERON:0004211!1.08e-07!16;UBERON:0001285!1.08e-07!16;UBERON:0007684!1.08e-07!16;UBERON:0003220!1.08e-07!16;UBERON:0004208!1.08e-07!16;UBERON:0000119!1.39e-07!312;UBERON:0002203!2.15e-07!6;UBERON:0001768!2.15e-07!6;UBERON:0000483!3.78e-07!309;UBERON:0006555!4.96e-07!17;UBERON:0005103!4.96e-07!17;UBERON:0000083!4.96e-07!17;UBERON:0009201!4.96e-07!17;UBERON:0004819!4.96e-07!17;UBERON:0006553!4.96e-07!17;UBERON:0003074!4.96e-07!17;UBERON:0003060!4.96e-07!17;UBERON:0002200!6.23e-07!11;UBERON:0006876!6.23e-07!11;UBERON:0002619!6.84e-07!22 | |ontology_enrichment_uberon=UBERON:0003075!4.76e-20!86;UBERON:0007284!4.76e-20!86;UBERON:0003056!7.05e-20!61;UBERON:0005743!1.69e-19!86;UBERON:0002346!2.66e-19!90;UBERON:0000073!1.09e-18!94;UBERON:0001016!1.09e-18!94;UBERON:0001017!4.58e-18!82;UBERON:0000033!8.15e-16!123;UBERON:0000153!1.94e-15!129;UBERON:0007811!1.94e-15!129;UBERON:0004121!7.71e-15!169;UBERON:0002616!1.22e-14!59;UBERON:0000924!1.36e-14!173;UBERON:0006601!1.36e-14!173;UBERON:0001049!8.58e-14!57;UBERON:0005068!8.58e-14!57;UBERON:0006241!8.58e-14!57;UBERON:0007135!8.58e-14!57;UBERON:0000955!4.18e-13!69;UBERON:0006238!4.18e-13!69;UBERON:0001869!1.68e-12!32;UBERON:0002020!1.74e-12!34;UBERON:0003528!1.74e-12!34;UBERON:0001893!2.88e-12!34;UBERON:0002780!5.12e-12!41;UBERON:0001890!5.12e-12!41;UBERON:0006240!5.12e-12!41;UBERON:0002791!9.96e-12!33;UBERON:0003080!1.58e-11!42;UBERON:0000970!6.38e-11!20;UBERON:0002104!3.80e-10!21;UBERON:0000019!5.54e-10!19;UBERON:0000047!5.54e-10!19;UBERON:0004088!5.54e-10!19;UBERON:0003072!5.54e-10!19;UBERON:0003071!5.54e-10!19;UBERON:0004128!5.54e-10!19;UBERON:0000064!9.94e-10!219;UBERON:0001801!1.64e-09!14;UBERON:0000475!2.90e-09!365;UBERON:0000956!6.03e-09!25;UBERON:0000203!6.03e-09!25;UBERON:0000020!8.21e-09!23;UBERON:0000481!1.39e-08!347;UBERON:0001456!1.42e-08!21;UBERON:0001032!3.11e-08!24;UBERON:0004456!3.11e-08!24;UBERON:0000922!3.13e-08!612;UBERON:0009773!3.29e-08!12;UBERON:0001231!3.29e-08!12;UBERON:0004810!3.29e-08!12;UBERON:0000468!3.34e-08!659;UBERON:0001950!5.79e-08!20;UBERON:0004211!1.08e-07!16;UBERON:0001285!1.08e-07!16;UBERON:0007684!1.08e-07!16;UBERON:0003220!1.08e-07!16;UBERON:0004208!1.08e-07!16;UBERON:0000119!1.39e-07!312;UBERON:0002203!2.15e-07!6;UBERON:0001768!2.15e-07!6;UBERON:0000483!3.78e-07!309;UBERON:0006555!4.96e-07!17;UBERON:0005103!4.96e-07!17;UBERON:0000083!4.96e-07!17;UBERON:0009201!4.96e-07!17;UBERON:0004819!4.96e-07!17;UBERON:0006553!4.96e-07!17;UBERON:0003074!4.96e-07!17;UBERON:0003060!4.96e-07!17;UBERON:0002200!6.23e-07!11;UBERON:0006876!6.23e-07!11;UBERON:0002619!6.84e-07!22 | ||
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| ||
|short_description=p@chr6:42145989..42146035,+ | |short_description=p@chr6:42145989..42146035,+ | ||
}} | }} |
Latest revision as of 01:38, 31 July 2015
Short description: | p@chr6:42145989..42146035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:42145989..42146035, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.70e-14 | 5 |
kidney tubule cell | 3.95e-14 | 10 |
nephron tubule epithelial cell | 3.95e-14 | 10 |
neurectodermal cell | 1.40e-09 | 59 |
placental epithelial cell | 4.47e-09 | 3 |
epithelial cell of nephron | 6.04e-09 | 15 |
ciliated cell | 3.11e-08 | 3 |
ciliated epithelial cell | 3.11e-08 | 3 |
multi-ciliated epithelial cell | 3.11e-08 | 3 |
non-pigmented ciliary epithelial cell | 3.11e-08 | 3 |
oligodendrocyte | 4.82e-08 | 7 |
macroglial cell | 4.82e-08 | 7 |
astrocyte | 4.82e-08 | 7 |
oligodendrocyte precursor cell | 4.82e-08 | 7 |
neuronal stem cell | 8.40e-08 | 8 |
kidney cell | 9.91e-08 | 17 |
kidney epithelial cell | 9.91e-08 | 17 |
neuron | 2.52e-07 | 6 |
neuroblast | 2.52e-07 | 6 |
electrically signaling cell | 2.52e-07 | 6 |
astrocyte of the cerebral cortex | 2.94e-07 | 3 |
ectodermal cell | 4.13e-07 | 72 |
neural cell | 5.56e-07 | 25 |