FFCP PHASE1:Hg19::chr13:98795339..98795360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10160 | |EntrezGene=10160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3591 | |HGNC=3591 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCB0,C9JME2,Q5JVI9,Q9Y4F1 | |UniProt=E9PCB0,C9JME2,Q5JVI9,Q9Y4F1 | ||
|association_with_transcript=-73bp_to_ENST00000376581,ENST00000376584,ENST00000376586,NM_001001715,NM_005766,uc001vni.2,uc001vnj.2_5end | |association_with_transcript=-73bp_to_ENST00000376581,ENST00000376584,ENST00000376586,NM_001001715,NM_005766,uc001vni.2,uc001vnj.2_5end | ||
|cluster_id=chr13:98795339..98795360,+ | |||
|description=CAGE_peak_1_at_FARP1_5end | |description=CAGE_peak_1_at_FARP1_5end | ||
|id=chr13:98795339..98795360,+ | |id=chr13:98795339..98795360,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.63e-18!180;CL:0002321!5.37e-13!248;CL:0000220!1.12e-12!246;CL:1000449!3.72e-10!16;CL:1000497!8.23e-10!18;CL:0002518!8.23e-10!18;CL:1000507!3.00e-08!12;CL:1000494!3.00e-08!12;CL:0002681!3.23e-08!13;CL:0002584!3.23e-08!13;CL:0000133!3.26e-08!59;CL:0000057!4.78e-08!75;CL:0000222!8.45e-07!119;CL:0000333!9.84e-07!41 | |ontology_enrichment_celltype=CL:0000055!4.63e-18!180;CL:0002321!5.37e-13!248;CL:0000220!1.12e-12!246;CL:1000449!3.72e-10!16;CL:1000497!8.23e-10!18;CL:0002518!8.23e-10!18;CL:1000507!3.00e-08!12;CL:1000494!3.00e-08!12;CL:0002681!3.23e-08!13;CL:0002584!3.23e-08!13;CL:0000133!3.26e-08!59;CL:0000057!4.78e-08!75;CL:0000222!8.45e-07!119;CL:0000333!9.84e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.95e-10;15!CL:1000497;9.64e-10;17!CL:0002518;9.64e-10;17!CL:0002681;3.57e-08;12!CL:0002584;3.57e-08;12!CL:1000507;6.88e-08;10!CL:1000494;6.88e-08;10 | |ontology_enrichment_celltype_v019=CL:1000449;3.95e-10;15!CL:1000497;9.64e-10;17!CL:0002518;9.64e-10;17!CL:0002681;3.57e-08;12!CL:0002584;3.57e-08;12!CL:1000507;6.88e-08;10!CL:1000494;6.88e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.02e-13,250;CL:1000449,3.99e-10,15;CL:1000497,9.62e-10,17;CL:0002518,9.62e-10,17;CL:0000057,1.70e-08,76;CL:0000133,3.07e-08,59;CL:0002681,3.60e-08,12;CL:0002584,3.60e-08,12;CL:1000507,6.88e-08,10;CL:1000494,6.88e-08,10;CL:0000222,4.39e-07,121;CL:0000333,9.40e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.84e-22!365;UBERON:0000119!1.24e-21!312;UBERON:0000483!9.90e-21!309;UBERON:0000481!7.94e-20!347;UBERON:0000025!2.73e-14!194;UBERON:0000477!4.30e-14!286;UBERON:0005256!4.97e-14!143;UBERON:0000468!1.73e-13!659;UBERON:0004111!2.14e-13!241;UBERON:0002100!2.91e-13!216;UBERON:0000467!2.62e-11!625;UBERON:0000480!5.12e-11!626;UBERON:0003104!5.56e-11!238;UBERON:0009142!5.56e-11!238;UBERON:0006555!2.15e-10!17;UBERON:0005103!2.15e-10!17;UBERON:0000083!2.15e-10!17;UBERON:0009201!2.15e-10!17;UBERON:0004819!2.15e-10!17;UBERON:0006553!2.15e-10!17;UBERON:0003074!2.15e-10!17;UBERON:0003060!2.15e-10!17;UBERON:0004876!2.99e-10!20;UBERON:0004211!3.72e-10!16;UBERON:0001285!3.72e-10!16;UBERON:0007684!3.72e-10!16;UBERON:0003220!3.72e-10!16;UBERON:0004208!3.72e-10!16;UBERON:0000353!4.02e-10!17;UBERON:0000922!4.22e-10!612;UBERON:0005177!4.49e-10!107;UBERON:0000080!4.78e-10!18;UBERON:0002120!4.78e-10!18;UBERON:0004875!4.78e-10!18;UBERON:0005721!4.78e-10!18;UBERON:0005754!4.78e-10!18;UBERON:0007297!4.78e-10!18;UBERON:0000466!5.07e-10!126;UBERON:0000064!5.94e-10!219;UBERON:0003914!6.95e-10!118;UBERON:0005172!9.61e-10!55;UBERON:0005173!9.61e-10!55;UBERON:0001008!1.31e-09!45;UBERON:0000058!1.94e-09!26;UBERON:0006554!2.08e-09!44;UBERON:0009569!2.58e-09!113;UBERON:0002417!3.05e-09!61;UBERON:0000916!3.05e-09!61;UBERON:0003064!4.71e-09!37;UBERON:0000490!4.78e-09!138;UBERON:0002050!6.27e-09!605;UBERON:0005423!6.27e-09!605;UBERON:0000923!1.05e-08!604;UBERON:0005291!1.05e-08!604;UBERON:0006598!1.05e-08!604;UBERON:0002532!1.05e-08!604;UBERON:0000489!1.45e-08!32;UBERON:0004121!1.53e-08!169;UBERON:0000924!2.08e-08!173;UBERON:0006601!2.08e-08!173;UBERON:0009773!3.00e-08!12;UBERON:0001231!3.00e-08!12;UBERON:0004810!3.00e-08!12;UBERON:0003887!3.05e-08!21;UBERON:0001225!3.23e-08!13;UBERON:0008987!3.23e-08!13;UBERON:0002113!4.30e-08!27;UBERON:0003918!4.30e-08!27;UBERON:0005095!4.30e-08!27;UBERON:0007687!4.30e-08!27;UBERON:0000073!5.21e-08!94;UBERON:0001016!5.21e-08!94;UBERON:0000464!4.45e-07!104;UBERON:0001851!4.85e-07!16 | |ontology_enrichment_uberon=UBERON:0000475!3.84e-22!365;UBERON:0000119!1.24e-21!312;UBERON:0000483!9.90e-21!309;UBERON:0000481!7.94e-20!347;UBERON:0000025!2.73e-14!194;UBERON:0000477!4.30e-14!286;UBERON:0005256!4.97e-14!143;UBERON:0000468!1.73e-13!659;UBERON:0004111!2.14e-13!241;UBERON:0002100!2.91e-13!216;UBERON:0000467!2.62e-11!625;UBERON:0000480!5.12e-11!626;UBERON:0003104!5.56e-11!238;UBERON:0009142!5.56e-11!238;UBERON:0006555!2.15e-10!17;UBERON:0005103!2.15e-10!17;UBERON:0000083!2.15e-10!17;UBERON:0009201!2.15e-10!17;UBERON:0004819!2.15e-10!17;UBERON:0006553!2.15e-10!17;UBERON:0003074!2.15e-10!17;UBERON:0003060!2.15e-10!17;UBERON:0004876!2.99e-10!20;UBERON:0004211!3.72e-10!16;UBERON:0001285!3.72e-10!16;UBERON:0007684!3.72e-10!16;UBERON:0003220!3.72e-10!16;UBERON:0004208!3.72e-10!16;UBERON:0000353!4.02e-10!17;UBERON:0000922!4.22e-10!612;UBERON:0005177!4.49e-10!107;UBERON:0000080!4.78e-10!18;UBERON:0002120!4.78e-10!18;UBERON:0004875!4.78e-10!18;UBERON:0005721!4.78e-10!18;UBERON:0005754!4.78e-10!18;UBERON:0007297!4.78e-10!18;UBERON:0000466!5.07e-10!126;UBERON:0000064!5.94e-10!219;UBERON:0003914!6.95e-10!118;UBERON:0005172!9.61e-10!55;UBERON:0005173!9.61e-10!55;UBERON:0001008!1.31e-09!45;UBERON:0000058!1.94e-09!26;UBERON:0006554!2.08e-09!44;UBERON:0009569!2.58e-09!113;UBERON:0002417!3.05e-09!61;UBERON:0000916!3.05e-09!61;UBERON:0003064!4.71e-09!37;UBERON:0000490!4.78e-09!138;UBERON:0002050!6.27e-09!605;UBERON:0005423!6.27e-09!605;UBERON:0000923!1.05e-08!604;UBERON:0005291!1.05e-08!604;UBERON:0006598!1.05e-08!604;UBERON:0002532!1.05e-08!604;UBERON:0000489!1.45e-08!32;UBERON:0004121!1.53e-08!169;UBERON:0000924!2.08e-08!173;UBERON:0006601!2.08e-08!173;UBERON:0009773!3.00e-08!12;UBERON:0001231!3.00e-08!12;UBERON:0004810!3.00e-08!12;UBERON:0003887!3.05e-08!21;UBERON:0001225!3.23e-08!13;UBERON:0008987!3.23e-08!13;UBERON:0002113!4.30e-08!27;UBERON:0003918!4.30e-08!27;UBERON:0005095!4.30e-08!27;UBERON:0007687!4.30e-08!27;UBERON:0000073!5.21e-08!94;UBERON:0001016!5.21e-08!94;UBERON:0000464!4.45e-07!104;UBERON:0001851!4.85e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.95e-10;15!UBERON:0004819;3.95e-10;15!UBERON:0001285;3.95e-10;15!UBERON:0007684;3.95e-10;15!UBERON:0000353;2.07e-09;15!UBERON:0006554;2.43e-09;30!UBERON:0001008;2.43e-09;30!UBERON:0000489;2.89e-08;29!UBERON:0001225;3.57e-08;12!UBERON:0008987;3.57e-08;12!UBERON:0004211;6.88e-08;10!UBERON:0009773;6.88e-08;10!UBERON:0001231;6.88e-08;10!UBERON:0004810;6.88e-08;10!UBERON:0002113;7.52e-08;24!UBERON:0011143;7.52e-08;24!UBERON:0001851;5.69e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0006555;3.95e-10;15!UBERON:0004819;3.95e-10;15!UBERON:0001285;3.95e-10;15!UBERON:0007684;3.95e-10;15!UBERON:0000353;2.07e-09;15!UBERON:0006554;2.43e-09;30!UBERON:0001008;2.43e-09;30!UBERON:0000489;2.89e-08;29!UBERON:0001225;3.57e-08;12!UBERON:0008987;3.57e-08;12!UBERON:0004211;6.88e-08;10!UBERON:0009773;6.88e-08;10!UBERON:0001231;6.88e-08;10!UBERON:0004810;6.88e-08;10!UBERON:0002113;7.52e-08;24!UBERON:0011143;7.52e-08;24!UBERON:0001851;5.69e-07;15 | ||
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| ||
|short_description=p1@FARP1 | |short_description=p1@FARP1 | ||
}} | }} |
Latest revision as of 07:08, 18 September 2015
Short description: | p1@FARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000376581, ENST00000376584, ENST00000376586, NM_001001715, NM_005766, uc001vni.2, uc001vnj.2_5end |
EntrezGene: | FARP1 |
HGNC: | 3591 |
UniProt: | E9PCB0C9JME2Q5JVI9Q9Y4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.02e-13 | 250 |
epithelial cell of nephron | 3.99e-10 | 15 |
kidney cell | 9.62e-10 | 17 |
kidney epithelial cell | 9.62e-10 | 17 |
fibroblast | 1.70e-08 | 76 |
neurectodermal cell | 3.07e-08 | 59 |
kidney cortical cell | 3.60e-08 | 12 |
renal cortical epithelial cell | 3.60e-08 | 12 |
kidney tubule cell | 6.88e-08 | 10 |
nephron tubule epithelial cell | 6.88e-08 | 10 |
mesodermal cell | 4.39e-07 | 121 |
migratory neural crest cell | 9.40e-07 | 41 |