FFCP PHASE1:Hg19::chr8:42397037..42397121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6575 | |EntrezGene=6575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10947 | |HGNC=10947 | ||
|TSSclassifier=strong | |||
|UniProt=Q08357 | |UniProt=Q08357 | ||
|association_with_transcript=0bp_to_ENST00000342228,NM_006749,uc003xpe.2_5end | |association_with_transcript=0bp_to_ENST00000342228,NM_006749,uc003xpe.2_5end | ||
|cluster_id=chr8:42397037..42397121,- | |||
|description=CAGE_peak_5_at_SLC20A2_5end | |description=CAGE_peak_5_at_SLC20A2_5end | ||
|id=chr8:42397037..42397121,- | |id=chr8:42397037..42397121,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.12e-13!86;UBERON:0004121!3.22e-13!169;UBERON:0003075!5.56e-13!86;UBERON:0007284!5.56e-13!86;UBERON:0002616!5.93e-13!59;UBERON:0001049!1.44e-12!57;UBERON:0005068!1.44e-12!57;UBERON:0006241!1.44e-12!57;UBERON:0007135!1.44e-12!57;UBERON:0000924!1.45e-12!173;UBERON:0006601!1.45e-12!173;UBERON:0001017!1.57e-12!82;UBERON:0000033!2.54e-12!123;UBERON:0000073!2.63e-12!94;UBERON:0001016!2.63e-12!94;UBERON:0000153!4.30e-12!129;UBERON:0007811!4.30e-12!129;UBERON:0002346!5.89e-12!90;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0003056!4.39e-10!61;UBERON:0002780!8.79e-09!41;UBERON:0001890!8.79e-09!41;UBERON:0006240!8.79e-09!41;UBERON:0003080!4.93e-08!42;UBERON:0001893!1.41e-07!34;UBERON:0002020!3.17e-07!34;UBERON:0003528!3.17e-07!34;UBERON:0000475!3.59e-07!365;UBERON:0002791!3.82e-07!33;UBERON:0001869!7.54e-07!32 | |ontology_enrichment_uberon=UBERON:0005743!3.12e-13!86;UBERON:0004121!3.22e-13!169;UBERON:0003075!5.56e-13!86;UBERON:0007284!5.56e-13!86;UBERON:0002616!5.93e-13!59;UBERON:0001049!1.44e-12!57;UBERON:0005068!1.44e-12!57;UBERON:0006241!1.44e-12!57;UBERON:0007135!1.44e-12!57;UBERON:0000924!1.45e-12!173;UBERON:0006601!1.45e-12!173;UBERON:0001017!1.57e-12!82;UBERON:0000033!2.54e-12!123;UBERON:0000073!2.63e-12!94;UBERON:0001016!2.63e-12!94;UBERON:0000153!4.30e-12!129;UBERON:0007811!4.30e-12!129;UBERON:0002346!5.89e-12!90;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0003056!4.39e-10!61;UBERON:0002780!8.79e-09!41;UBERON:0001890!8.79e-09!41;UBERON:0006240!8.79e-09!41;UBERON:0003080!4.93e-08!42;UBERON:0001893!1.41e-07!34;UBERON:0002020!3.17e-07!34;UBERON:0003528!3.17e-07!34;UBERON:0000475!3.59e-07!365;UBERON:0002791!3.82e-07!33;UBERON:0001869!7.54e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.38e-07;53!UBERON:0002616;4.38e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0000073;4.38e-07;53!UBERON:0002616;4.38e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.78e-16,104;UBERON:0003075,2.11e-14,82;UBERON:0007284,2.11e-14,82;UBERON:0004121,9.77e-14,171;UBERON:0000924,9.77e-14,171;UBERON:0006601,9.77e-14,171;UBERON:0001049,7.71e-13,56;UBERON:0005068,7.71e-13,56;UBERON:0006241,7.71e-13,56;UBERON:0007135,7.71e-13,56;UBERON:0002346,8.32e-13,86;UBERON:0001017,1.86e-12,81;UBERON:0001016,8.11e-12,89;UBERON:0000073,8.47e-12,53;UBERON:0002616,8.47e-12,53;UBERON:0000955,7.57e-11,68;UBERON:0006238,7.57e-11,68;UBERON:0003056,1.42e-09,61;UBERON:0002780,3.48e-08,41;UBERON:0001890,3.48e-08,41;UBERON:0003080,3.48e-08,41;UBERON:0006240,3.48e-08,41;UBERON:0010314,5.26e-08,132;UBERON:0001893,7.34e-07,34 | |||
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| ||
|short_description=p5@SLC20A2 | |short_description=p5@SLC20A2 | ||
}} | }} |
Latest revision as of 08:09, 18 September 2015
Short description: | p5@SLC20A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC20A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342228, NM_006749, uc003xpe.2_5end |
EntrezGene: | SLC20A2 |
HGNC: | 10947 |
UniProt: | Q08357 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.78e-16 | 104 |
neural plate | 2.11e-14 | 82 |
presumptive neural plate | 2.11e-14 | 82 |
ectoderm-derived structure | 9.77e-14 | 171 |
ectoderm | 9.77e-14 | 171 |
presumptive ectoderm | 9.77e-14 | 171 |
neural tube | 7.71e-13 | 56 |
neural rod | 7.71e-13 | 56 |
future spinal cord | 7.71e-13 | 56 |
neural keel | 7.71e-13 | 56 |
neurectoderm | 8.32e-13 | 86 |
central nervous system | 1.86e-12 | 81 |
nervous system | 8.11e-12 | 89 |
regional part of nervous system | 8.47e-12 | 53 |
regional part of brain | 8.47e-12 | 53 |
brain | 7.57e-11 | 68 |
future brain | 7.57e-11 | 68 |
pre-chordal neural plate | 1.42e-09 | 61 |
regional part of forebrain | 3.48e-08 | 41 |
forebrain | 3.48e-08 | 41 |
anterior neural tube | 3.48e-08 | 41 |
future forebrain | 3.48e-08 | 41 |
structure with developmental contribution from neural crest | 5.26e-08 | 132 |
telencephalon | 7.34e-07 | 34 |