FFCP PHASE1:Hg19::chr15:25669649..25669652,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:25669649..25669652,- | |||
|description=CAGE_peak_at_chr15:25669649..25669652,- | |description=CAGE_peak_at_chr15:25669649..25669652,- | ||
|id=chr15:25669649..25669652,- | |id=chr15:25669649..25669652,- | ||
|ontology_enrichment_celltype=CL:0002087!1.91e-07!119 | |ontology_enrichment_celltype=CL:0002087!1.91e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.97e-18;18!CL:0000789;4.97e-18;18!CL:0002419;4.97e-18;18!CL:0000624;2.66e-14;6!CL:0000084;4.22e-13;25!CL:0000542;3.21e-08;53!CL:0000625;3.69e-08;11!CL:0000623;5.54e-08;3 | |ontology_enrichment_celltype_v019=CL:0000791;4.97e-18;18!CL:0000789;4.97e-18;18!CL:0002419;4.97e-18;18!CL:0000624;2.66e-14;6!CL:0000084;4.22e-13;25!CL:0000542;3.21e-08;53!CL:0000625;3.69e-08;11!CL:0000623;5.54e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.65e-18,18;CL:0000789,4.65e-18,18;CL:0002420,4.65e-18,18;CL:0002419,4.65e-18,18;CL:0000790,4.65e-18,18;CL:0000624,3.04e-14,6;CL:0000838,1.10e-13,52;CL:0000542,2.00e-13,53;CL:0000051,2.00e-13,53;CL:0000084,4.02e-13,25;CL:0000827,4.02e-13,25;CL:0002087,1.23e-10,115;CL:0002031,3.52e-10,120;CL:0000738,6.11e-09,136;CL:0000625,3.25e-08,11;CL:0000623,5.18e-08,3;CL:0000825,5.18e-08,3;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.70e-07,168;CL:0000988,9.05e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!CL:0000790;4.97e-18;18!CL:0000051;3.21e-08;53!UBERON:0003056;7.50e-08;3 | |ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!CL:0000790;4.97e-18;18!CL:0000051;3.21e-08;53!UBERON:0003056;7.50e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.31e-21,1;UBERON:0001785,6.31e-21,1;UBERON:0002464,6.31e-21,1;UBERON:0004904,6.31e-21,1;UBERON:0001021,6.31e-21,1;UBERON:0003902,6.31e-21,1;UBERON:0005425,6.31e-21,1;UBERON:0003714,3.70e-11,2;UBERON:0005162,3.70e-11,2;UBERON:0000122,3.70e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,0.802177789880567,3.03815219002193,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.75374599577023,0,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0.336985893439485,0,0,0,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,0.393419540227666,2.35806457649499,2.05601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,1.60464117470104,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0.788123040807709,0.862510299438069,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0.426851060090485,0,0.199579371432817,0,0,0,0.561594356226918,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.63337622438398,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.379864775735272,0.195551382734803,0,0,0,0.144090417154106,0,0.686379991447858,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0.169732529954025,0.425149840203366,0.123935764259002,0.558644917973244,0,0.47317047000752,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0.0981477185010256,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0.270150338473579,0,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,0.351742488719241,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0.596852325484105,0,0,0.439762066981716,0.150962843566674,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0.352894871715692,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.203977659483963,0,0,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0.23806443146374,0,0.248298857183432,0.112131862580613,0,0.404234377916439,0.217716747896961,0,0,0,0.665320713092027,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,0.802177789880567,3.03815219002193,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.75374599577023,0,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0.336985893439485,0,0,0,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,0.393419540227666,2.35806457649499,2.05601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,1.60464117470104,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0.788123040807709,0.862510299438069,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0.426851060090485,0,0.199579371432817,0,0,0,0.561594356226918,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.63337622438398,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.379864775735272,0.195551382734803,0,0,0,0.144090417154106,0,0.686379991447858,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0.169732529954025,0.425149840203366,0.123935764259002,0.558644917973244,0,0.47317047000752,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0.0981477185010256,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0.270150338473579,0,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,0.351742488719241,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0.596852325484105,0,0,0.439762066981716,0.150962843566674,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0.352894871715692,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.203977659483963,0,0,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0.23806443146374,0,0.248298857183432,0.112131862580613,0,0.404234377916439,0.217716747896961,0,0,0,0.665320713092027,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr15:25669649..25669652,- | |short_description=p@chr15:25669649..25669652,- | ||
}} | }} |
Latest revision as of 00:31, 25 July 2015
Short description: | p@chr15:25669649..25669652, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:25669649..25669652, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.65e-18 | 18 |
alpha-beta T cell | 4.65e-18 | 18 |
immature T cell | 4.65e-18 | 18 |
mature T cell | 4.65e-18 | 18 |
immature alpha-beta T cell | 4.65e-18 | 18 |
CD4-positive, alpha-beta T cell | 3.04e-14 | 6 |
lymphoid lineage restricted progenitor cell | 1.10e-13 | 52 |
lymphocyte | 2.00e-13 | 53 |
common lymphoid progenitor | 2.00e-13 | 53 |
T cell | 4.02e-13 | 25 |
pro-T cell | 4.02e-13 | 25 |
nongranular leukocyte | 1.23e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.52e-10 | 120 |
leukocyte | 6.11e-09 | 136 |
CD8-positive, alpha-beta T cell | 3.25e-08 | 11 |
natural killer cell | 5.18e-08 | 3 |
pro-NK cell | 5.18e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.70e-07 | 168 |
hematopoietic cell | 9.05e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.31e-21 | 1 |
cranial nerve | 6.31e-21 | 1 |
nerve trunk | 6.31e-21 | 1 |
nerve connecting eye with brain | 6.31e-21 | 1 |
nerve | 6.31e-21 | 1 |
retinal neural layer | 6.31e-21 | 1 |
presumptive neural retina | 6.31e-21 | 1 |
neural tissue | 3.70e-11 | 2 |
multi cell component structure | 3.70e-11 | 2 |
neuron projection bundle | 3.70e-11 | 2 |