FFCP PHASE1:Hg19::chr12:54694758..54694805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4778 | |EntrezGene=4778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7780 | |HGNC=7780 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3E0,Q16621 | |UniProt=A8K3E0,Q16621 | ||
|association_with_transcript=0bp_to_ENST00000553070,NM_001136023,uc001sfr.3,uc009znl.2_5end | |association_with_transcript=0bp_to_ENST00000553070,NM_001136023,uc001sfr.3,uc009znl.2_5end | ||
|cluster_id=chr12:54694758..54694805,- | |||
|coexpression_cluster_id=C802 | |coexpression_cluster_id=C802 | ||
|description=CAGE_peak_1_at_NFE2_5end | |description=CAGE_peak_1_at_NFE2_5end | ||
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|ontology_enrichment_celltype=CL:0000763!1.33e-41!112;CL:0000049!1.33e-41!112;CL:0000037!2.72e-30!172;CL:0000566!2.72e-30!172;CL:0002032!4.46e-29!165;CL:0000837!4.46e-29!165;CL:0000988!1.12e-27!182;CL:0000766!6.91e-26!76;CL:0000860!8.23e-23!45;CL:0000839!1.70e-22!70;CL:0002057!1.76e-22!42;CL:0000557!2.92e-20!71;CL:0002194!1.18e-18!63;CL:0000576!1.18e-18!63;CL:0000040!1.18e-18!63;CL:0000559!1.18e-18!63;CL:0002009!3.28e-17!65;CL:0000738!3.54e-14!140;CL:0002031!9.94e-13!124;CL:0002087!1.71e-11!119;CL:0002320!3.23e-09!365;CL:0000134!1.97e-08!358 | |ontology_enrichment_celltype=CL:0000763!1.33e-41!112;CL:0000049!1.33e-41!112;CL:0000037!2.72e-30!172;CL:0000566!2.72e-30!172;CL:0002032!4.46e-29!165;CL:0000837!4.46e-29!165;CL:0000988!1.12e-27!182;CL:0000766!6.91e-26!76;CL:0000860!8.23e-23!45;CL:0000839!1.70e-22!70;CL:0002057!1.76e-22!42;CL:0000557!2.92e-20!71;CL:0002194!1.18e-18!63;CL:0000576!1.18e-18!63;CL:0000040!1.18e-18!63;CL:0000559!1.18e-18!63;CL:0002009!3.28e-17!65;CL:0000738!3.54e-14!140;CL:0002031!9.94e-13!124;CL:0002087!1.71e-11!119;CL:0002320!3.23e-09!365;CL:0000134!1.97e-08!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.12e-22;33!CL:0002057;4.12e-22;33!CL:0000763;1.82e-19;100!CL:0000576;1.38e-18;48!CL:0000766;5.88e-16;69!CL:0000473;3.25e-15;39!CL:0000234;3.25e-15;39!CL:0000094;2.29e-08;8!CL:0000988;1.50e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;4.12e-22;33!CL:0002057;4.12e-22;33!CL:0000763;1.82e-19;100!CL:0000576;1.38e-18;48!CL:0000766;5.88e-16;69!CL:0000473;3.25e-15;39!CL:0000234;3.25e-15;39!CL:0000094;2.29e-08;8!CL:0000988;1.50e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.79e-60,108;CL:0000049,2.79e-60,108;CL:0000037,8.77e-44,168;CL:0002032,1.86e-41,161;CL:0000837,1.86e-41,161;CL:0000988,6.01e-41,177;CL:0000766,7.92e-36,72;CL:0000860,2.94e-31,42;CL:0002057,2.94e-31,42;CL:0000839,5.64e-31,66;CL:0000557,1.96e-28,67;CL:0000473,2.59e-26,48;CL:0000234,2.59e-26,48;CL:0002194,1.79e-25,59;CL:0000576,1.79e-25,59;CL:0000040,1.79e-25,59;CL:0000559,1.79e-25,59;CL:0002009,4.89e-24,61;CL:0000738,2.32e-20,136;CL:0002031,5.05e-17,120;CL:0002087,4.50e-15,115;CL:0002320,5.58e-12,361;CL:0000134,3.63e-11,354;CL:0000219,4.80e-09,386;CL:0002393,2.07e-08,9;CL:0002397,2.07e-08,9;CL:0000094,2.49e-08,8;CL:0000034,5.46e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-22;42!CL:0000049;6.08e-17;108 | |ontology_enrichment_development_v019=CL:0002057;1.38e-22;42!CL:0000049;6.08e-17;108 | ||
|ontology_enrichment_disease=DOID:8692!2.02e-20!31;DOID:1240!1.62e-15!39;DOID:2531!7.31e-09!51;DOID:0060083!7.31e-09!51;DOID:1036!8.02e-07!8 | |ontology_enrichment_disease=DOID:8692!2.02e-20!31;DOID:1240!1.62e-15!39;DOID:2531!7.31e-09!51;DOID:0060083!7.31e-09!51;DOID:1036!8.02e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.18e-27;31!DOID:1240;1.27e-17;39!DOID:2531;4.09e-10;51!DOID:0060083;4.09e-10;51!DOID:1036;4.94e-09;8 | |ontology_enrichment_disease_v019=DOID:8692;2.18e-27;31!DOID:1240;1.27e-17;39!DOID:2531;4.09e-10;51!DOID:0060083;4.09e-10;51!DOID:1036;4.94e-09;8 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.51e-28,31;DOID:1240,1.61e-22,39;DOID:2531,4.41e-15,51;DOID:0060083,4.41e-15,51;DOID:1036,4.97e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-24!102;UBERON:0003061!1.03e-24!102;UBERON:0002193!2.50e-20!112;UBERON:0002371!3.77e-20!80;UBERON:0001474!2.47e-19!86;UBERON:0004765!1.01e-17!101;UBERON:0001434!1.01e-17!101;UBERON:0002405!7.88e-14!115;UBERON:0002384!1.96e-09!375;UBERON:0002204!4.36e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.03e-24!102;UBERON:0003061!1.03e-24!102;UBERON:0002193!2.50e-20!112;UBERON:0002371!3.77e-20!80;UBERON:0001474!2.47e-19!86;UBERON:0004765!1.01e-17!101;UBERON:0001434!1.01e-17!101;UBERON:0002405!7.88e-14!115;UBERON:0002384!1.96e-09!375;UBERON:0002204!4.36e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-09;15!UBERON:0000179;1.75e-09;15!UBERON:0000463;1.75e-09;15!UBERON:0002390;5.18e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-09;15!UBERON:0000179;1.75e-09;15!UBERON:0000463;1.75e-09;15!UBERON:0002390;5.18e-07;32 | ||
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| ||
|short_description=p1@NFE2 | |short_description=p1@NFE2 | ||
}} | }} |
Latest revision as of 05:45, 19 September 2015
Short description: | p1@NFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFE2_5end |
Coexpression cluster: | C802_acute_Whole_chronic_blood_leukemia_Neutrophils_CD34 |
Association with transcript: | 0bp_to_ENST00000553070, NM_001136023, uc001sfr.3, uc009znl.2_5end |
EntrezGene: | NFE2 |
HGNC: | 7780 |
UniProt: | A8K3E0Q16621 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.79e-60 | 108 |
common myeloid progenitor | 2.79e-60 | 108 |
hematopoietic stem cell | 8.77e-44 | 168 |
hematopoietic oligopotent progenitor cell | 1.86e-41 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-41 | 161 |
hematopoietic cell | 6.01e-41 | 177 |
myeloid leukocyte | 7.92e-36 | 72 |
classical monocyte | 2.94e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-31 | 42 |
myeloid lineage restricted progenitor cell | 5.64e-31 | 66 |
granulocyte monocyte progenitor cell | 1.96e-28 | 67 |
defensive cell | 2.59e-26 | 48 |
phagocyte | 2.59e-26 | 48 |
monopoietic cell | 1.79e-25 | 59 |
monocyte | 1.79e-25 | 59 |
monoblast | 1.79e-25 | 59 |
promonocyte | 1.79e-25 | 59 |
macrophage dendritic cell progenitor | 4.89e-24 | 61 |
leukocyte | 2.32e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 5.05e-17 | 120 |
nongranular leukocyte | 4.50e-15 | 115 |
connective tissue cell | 5.58e-12 | 361 |
mesenchymal cell | 3.63e-11 | 354 |
motile cell | 4.80e-09 | 386 |
intermediate monocyte | 2.07e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.07e-08 | 9 |
granulocyte | 2.49e-08 | 8 |
stem cell | 5.46e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.67e-34 | 98 |
blood island | 9.67e-34 | 98 |
hemolymphoid system | 3.01e-29 | 108 |
bone marrow | 6.36e-26 | 76 |
skeletal element | 1.53e-24 | 90 |
bone element | 1.57e-24 | 82 |
skeletal system | 1.36e-21 | 100 |
immune system | 1.94e-21 | 93 |
connective tissue | 1.83e-11 | 371 |
blood | 1.76e-09 | 15 |
haemolymphatic fluid | 1.76e-09 | 15 |
organism substance | 1.76e-09 | 15 |
musculoskeletal system | 4.54e-09 | 167 |
lateral plate mesoderm | 2.22e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.51e-28 | 31 |
leukemia | 1.61e-22 | 39 |
hematologic cancer | 4.41e-15 | 51 |
immune system cancer | 4.41e-15 | 51 |
chronic leukemia | 4.97e-09 | 8 |