FFCP PHASE1:Hg19::chr20:42939882..42939897,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:42939882..42939897,-
|short_description=p2@FITM2
|description=CAGE_peak_2_at_FITM2_5end
|association_with_transcript=0bp_to_NM_001080472,uc002xlr.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=128486 | |EntrezGene=128486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16135 | |HGNC=16135 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6M3 | |UniProt=Q8N6M3 | ||
|association_with_transcript=0bp_to_NM_001080472,uc002xlr.1_5end | |||
|cluster_id=chr20:42939882..42939897,- | |||
|description=CAGE_peak_2_at_FITM2_5end | |||
|id=chr20:42939882..42939897,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;6.88e-08;3!CL:0002603;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,7.04e-08,3;CL:0002603,1.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.89e-12;2!DOID:178;7.45e-07;1!DOID:326;7.45e-07;1!DOID:3978;7.45e-07;1!DOID:3394;7.45e-07;1!DOID:5844;7.45e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.27e-12,2;DOID:178,7.49e-07,1;DOID:326,7.49e-07,1;DOID:3978,7.49e-07,1;DOID:3394,7.49e-07,1;DOID:5844,7.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.55e-15!57;UBERON:0005068!4.55e-15!57;UBERON:0006241!4.55e-15!57;UBERON:0007135!4.55e-15!57;UBERON:0002616!2.43e-14!59;UBERON:0001017!3.19e-14!82;UBERON:0000955!8.60e-14!69;UBERON:0006238!8.60e-14!69;UBERON:0005743!5.04e-13!86;UBERON:0001869!9.28e-13!32;UBERON:0000073!1.18e-12!94;UBERON:0001016!1.18e-12!94;UBERON:0001893!2.08e-12!34;UBERON:0002346!2.86e-12!90;UBERON:0002020!4.28e-12!34;UBERON:0003528!4.28e-12!34;UBERON:0002780!4.46e-12!41;UBERON:0001890!4.46e-12!41;UBERON:0006240!4.46e-12!41;UBERON:0002791!6.13e-12!33;UBERON:0003080!2.08e-11!42;UBERON:0002619!2.24e-11!22;UBERON:0003075!4.23e-11!86;UBERON:0007284!4.23e-11!86;UBERON:0001950!3.21e-10!20;UBERON:0000956!8.79e-10!25;UBERON:0000203!8.79e-10!25;UBERON:0003056!1.46e-08!61;UBERON:0007023!4.43e-08!115;UBERON:0000033!8.11e-08!123;UBERON:0000153!1.01e-07!129;UBERON:0007811!1.01e-07!129;UBERON:0000924!1.91e-07!173;UBERON:0006601!1.91e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.61e-14;20!UBERON:0002619;5.87e-13;22!UBERON:0000956;2.55e-11;25!UBERON:0000203;2.55e-11;25!UBERON:0001893;1.84e-10;34!UBERON:0002791;2.00e-10;32!UBERON:0001869;5.92e-10;32!UBERON:0003528;1.84e-09;34!UBERON:0002020;1.84e-09;34!UBERON:0002190;6.88e-08;3!UBERON:0001871;3.90e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.12e-14,20;UBERON:0002619,4.86e-13,22;UBERON:0000956,2.16e-11,25;UBERON:0000203,2.16e-11,25;UBERON:0000073,3.77e-11,53;UBERON:0002616,3.77e-11,53;UBERON:0002791,4.54e-11,32;UBERON:0001869,4.54e-11,32;UBERON:0001049,1.95e-10,56;UBERON:0005068,1.95e-10,56;UBERON:0006241,1.95e-10,56;UBERON:0007135,1.95e-10,56;UBERON:0003528,2.39e-10,34;UBERON:0002020,2.39e-10,34;UBERON:0001893,2.39e-10,34;UBERON:0001016,3.10e-09,89;UBERON:0001017,4.94e-09,81;UBERON:0002346,1.89e-08,86;UBERON:0002780,2.29e-08,41;UBERON:0001890,2.29e-08,41;UBERON:0003080,2.29e-08,41;UBERON:0006240,2.29e-08,41;UBERON:0000955,4.63e-08,68;UBERON:0006238,4.63e-08,68;UBERON:0002190,7.04e-08,3;UBERON:0003075,1.25e-07,82;UBERON:0007284,1.25e-07,82;UBERON:0001871,4.00e-07,6 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.986680828671798,0,0.893922188854576,0,0,1.26343974685366,2.35067065379855,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0,1.10808952269109,0.612002073732759,1.56727360739044,0,0,0.376627918784408,0,0.164201178899891,0,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0.668745981562712,0,0.473447805734733,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0.384273959177026,0.520237390239513,0.164437904603676,0.276350017785848,0.579606171470105,0.296573126324121,1.33770414044857,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0.318565414324097,1.30216690771284,0,0.451725357233318,0,0,0,0.821127996921047,0.403213486449465,0,0.724122019413995,0,0,0,0,0.50133791063589,0,0.795285947051099,0.486634870302636,0.472674085820339,0,0.175669571386252,0.654895377488563,0.728590576585084,0,0,0,0,0,0.571994910780128,0,0.596287222100115,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,0.576175924479999,0.468642863667593,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0.280901613404497,0.204154171254893,0,0.309977343527296,0,0,0.910161361938026,0,0,0.125118519871964,0,1.75591048352335,0,0.300476117813194,0,0,0,0.211931901159562,0.600182192168805,0,0,0,1.0126579934476,0.292311015483596,0.252433774244115,0,0.323292113637624,0.355009592516614,0.403008392910561,0,0,0,0.286804595389004,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0.354920400119532,0,1.20505514941741,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0.231860809950154,1.05667824812239,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.253991577168676,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0.43596006883328,0.07333828582095,0,0,0.845302752556,0.531876233169741,0,1.02882949704857,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.579125226670317,0.205476322550383,0.716243852959582,0.560425719967636,0,0,0.256686072559497,0,0,2.31986643833309,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0.362578348774867,0,0.0920809889358963,0,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.457847324091717,0.082509499920588,0,0,0,0,0,0.614014698904518,0.413509717453592,0.214840489736547,0.290033387828457,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.127612712494584,0,0,1.25924938732256,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0,0.459446800413919,0,0,0,0.714695326373367,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.432807638929335,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,1.09224469574562,0.111443384277478,0.568272293612826,0,0.296964680832639,0,2.98244294329889,0.562677665642051,0.222617410045812,0,0,0.19924798825107,0,1.0077309914171,0.102268682502155,0,0.622079175323615,0.179736702294654,0,0,0.591860433821602,0,0,0.969332746095218,0.74214478529481,0,0.7812832832557,0.699679999969566,0,0.341380344856499,0.254253650292766,0.472775363535873,0.689486746482929,0.874813840149763,0.173624994933292,1.77148277162768,0.361789315876224,0,0.663475559587348,0.59109523790709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| ||
|short_description=p2@FITM2 | |||
}} | }} |
Latest revision as of 07:51, 16 September 2015
Short description: | p2@FITM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FITM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001080472, uc002xlr.1_5end |
EntrezGene: | FITM2 |
HGNC: | 16135 |
UniProt: | Q8N6M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 7.04e-08 | 3 |
astrocyte of the cerebellum | 1.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.12e-14 | 20 |
regional part of cerebral cortex | 4.86e-13 | 22 |
cerebral cortex | 2.16e-11 | 25 |
pallium | 2.16e-11 | 25 |
regional part of nervous system | 3.77e-11 | 53 |
regional part of brain | 3.77e-11 | 53 |
regional part of telencephalon | 4.54e-11 | 32 |
cerebral hemisphere | 4.54e-11 | 32 |
neural tube | 1.95e-10 | 56 |
neural rod | 1.95e-10 | 56 |
future spinal cord | 1.95e-10 | 56 |
neural keel | 1.95e-10 | 56 |
brain grey matter | 2.39e-10 | 34 |
gray matter | 2.39e-10 | 34 |
telencephalon | 2.39e-10 | 34 |
nervous system | 3.10e-09 | 89 |
central nervous system | 4.94e-09 | 81 |
neurectoderm | 1.89e-08 | 86 |
regional part of forebrain | 2.29e-08 | 41 |
forebrain | 2.29e-08 | 41 |
anterior neural tube | 2.29e-08 | 41 |
future forebrain | 2.29e-08 | 41 |
brain | 4.63e-08 | 68 |
future brain | 4.63e-08 | 68 |
subcutaneous adipose tissue | 7.04e-08 | 3 |
neural plate | 1.25e-07 | 82 |
presumptive neural plate | 1.25e-07 | 82 |
temporal lobe | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.27e-12 | 2 |
vascular disease | 7.49e-07 | 1 |
ischemia | 7.49e-07 | 1 |
extrinsic cardiomyopathy | 7.49e-07 | 1 |
myocardial ischemia | 7.49e-07 | 1 |
myocardial infarction | 7.49e-07 | 1 |